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The map label for this gene is dppC [H]

Identifier: 116249435

GI number: 116249435

Start: 843022

End: 843957

Strand: Reverse

Name: dppC [H]

Synonym: pRL120773

Alternate gene names: 116249435

Gene position: 843957-843022 (Counterclockwise)

Preceding gene: 116249436

Following gene: 116249434

Centisome position: 97.0

GC content: 63.35

Gene sequence:

>936_bases
ATGACGATCTCCTCTGAGCACGCAAACAGCGTCAACATCGGCGGCCTTCGCAACTGGCTGCTCGCACCGGAGCCTCGAGG
CTGGTTCCAGTCATCGGCGCAGCAAATTCACCAGGGCTGGCGGAAATTCAGCCTGCACCCGCTTGGGCTGGCCGGATTAG
CCATCATCCTGCTGCTGATCGTCGTGGCGCTGGCCGCCCCGCTCCTGACGAGCTACGATCCGATCGTTCAGGACATGGCC
GGACGGCTTGCCGCGCCATCGGCGAGCCATTGGCTCGGCACCGACAATTTCGGCCGCGACGTCTTTTCACGGGTGATCTA
TGGCGCCCGCACGACGCTCTACATCATCATGCTCGTCACGGTCATTGTCGCCCCGCTCGGCCTGCTGATCGGCACCGTCT
CGGGCTATTTCGGCGGCATCGTCGATGAAATCCTGATGCGCGTCACCGATATTTTTCTCTCCTTCCCCGGCCTCGTGCTG
GCGCTGGGTTTTGCCGCAGCGCTCGGTCCAGGCATCACCAATGCAATCATCGCGATTTCACTGACGGCCTGGCCGCCGAT
AGCGCGCCTTGCGCGCGCCGAGACGCTCAGCCTTCGCAAGGCGGATTACATCGCCGCCATACGCCTGCAGGGCGCGACAT
CAATCGCGATCATCACTCGTCACATCCTGCCGATGTGCATTCCCTCGGTGATCGTCCGCGTCACCCTCAACATGGCCGGC
ATCATCATCACTGCCGCCGGTCTCGGCTTCCTCGGCCTCGGCGCGCAGCCGCCATGGCCGGAATGGGGTTCGATGGCCGC
CAGCGGACGTGAATTCATGCTCGACAGCCCCTGGGTCATCGCAGCACCCGGCATTGCCATTGCGCTCGTCAGCCTCGCCT
TCAACCTCGTCGGCGATGCGCTTCGCGATGTTCTCGATCCCCGAGGTTCGGAATGA

Upstream 100 bases:

>100_bases
GTCATGGGTTCGGTCCTGACGATCGGCGCCGTCTTCCTGACGATCAACATCCTGTCGGACTTCCTTTATCGCATTCTTGA
TCCGAGGACACGGTGACGCC

Downstream 100 bases:

>100_bases
CTGACCTGATCGATATTCAGAACCTCGAAATCGCCTTCGGCGGCGGACAGGTGCGGGCCGTGCGCGGCGTGAGCTTTTCG
CTTGGACAGGAAAAGCTAGG

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTISSEHANSVNIGGLRNWLLAPEPRGWFQSSAQQIHQGWRKFSLHPLGLAGLAIILLLIVVALAAPLLTSYDPIVQDMA
GRLAAPSASHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTVIVAPLGLLIGTVSGYFGGIVDEILMRVTDIFLSFPGLVL
ALGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAIRLQGATSIAIITRHILPMCIPSVIVRVTLNMAG
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE

Sequences:

>Translated_311_residues
MTISSEHANSVNIGGLRNWLLAPEPRGWFQSSAQQIHQGWRKFSLHPLGLAGLAIILLLIVVALAAPLLTSYDPIVQDMA
GRLAAPSASHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTVIVAPLGLLIGTVSGYFGGIVDEILMRVTDIFLSFPGLVL
ALGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAIRLQGATSIAIITRHILPMCIPSVIVRVTLNMAG
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE
>Mature_310_residues
TISSEHANSVNIGGLRNWLLAPEPRGWFQSSAQQIHQGWRKFSLHPLGLAGLAIILLLIVVALAAPLLTSYDPIVQDMAG
RLAAPSASHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTVIVAPLGLLIGTVSGYFGGIVDEILMRVTDIFLSFPGLVLA
LGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAIRLQGATSIAIITRHILPMCIPSVIVRVTLNMAGI
IITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=44.2748091603053, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=42.4908424908425, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=43.0379746835443, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1789964, Length=279, Percent_Identity=41.9354838709677, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787549, Length=273, Percent_Identity=32.2344322344322, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788505, Length=223, Percent_Identity=30.0448430493274, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32957; Mature: 32826

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISSEHANSVNIGGLRNWLLAPEPRGWFQSSAQQIHQGWRKFSLHPLGLAGLAIILLLI
CCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVALAAPLLTSYDPIVQDMAGRLAAPSASHWLGTDNFGRDVFSRVIYGARTTLYIIMLVT
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIVAPLGLLIGTVSGYFGGIVDEILMRVTDIFLSFPGLVLALGFAAALGPGITNAIIAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEE
LTAWPPIARLARAETLSLRKADYIAAIRLQGATSIAIITRHILPMCIPSVIVRVTLNMAG
ECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDA
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHH
LRDVLDPRGSE
HHHHHCCCCCC
>Mature Secondary Structure 
TISSEHANSVNIGGLRNWLLAPEPRGWFQSSAQQIHQGWRKFSLHPLGLAGLAIILLLI
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVALAAPLLTSYDPIVQDMAGRLAAPSASHWLGTDNFGRDVFSRVIYGARTTLYIIMLVT
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIVAPLGLLIGTVSGYFGGIVDEILMRVTDIFLSFPGLVLALGFAAALGPGITNAIIAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEE
LTAWPPIARLARAETLSLRKADYIAAIRLQGATSIAIITRHILPMCIPSVIVRVTLNMAG
ECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDA
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHH
LRDVLDPRGSE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]