| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is zwf [H]
Identifier: 116249225
GI number: 116249225
Start: 611772
End: 613238
Strand: Reverse
Name: zwf [H]
Synonym: pRL120561
Alternate gene names: 116249225
Gene position: 613238-611772 (Counterclockwise)
Preceding gene: 116249226
Following gene: 116249216
Centisome position: 70.49
GC content: 60.87
Gene sequence:
>1467_bases ATGAGTGTTTTGCGCAAGAATTCAACTCGGGTTGGCCCTGGCTATCCACAGGTCGTTGTGCTCGTCGGCGCAACAGGCGA TCTCTCACGGCGCAAGCTACTGACCGGGCTGTTCCACCTCACCAATGCGGGCTTCATCCCAGGCTGCCGCATTATCGGCG TCTCGCTCGACGATATCGACGCGGATGCCTTCCGCACCATCGCCCGTGACTCGCTTGACAAGTTCTTGACTCGCAAGTTC TCGCAGTCCGAATGGGAAGCGTTTGCCGCATCGCTCGACTATGTCCCGCTCGCAGCAGGCGCCAATGCTCTCAAGGAAGC GGTCGACAGGGCCGAGGAAGCACTGGGCGCCGAGACGCGGCGCGTGCATTATTTATCCGTGCCACCAAGTGCCGCCCTTC TAGCCGTGCAACTCCTCGCCCAGGCTGAGCTGACTGAACGCTCCCGTATCATCATGGAAAAGCCCTTCGGTACGGACCTT GCTAGTGCCGTTGCACTGAACAAGAAGCTGCACGAGGTGTTCGACGAGAAGCAGATCTTCCGCATCGACCATTTCCTCGG CAAGGAGCCGGCGCAAAACATCCTGGCCTTCCGATTTGCCAATGGCCTGTTCGAACCAATCTGGAACCGCAACTTCATCG ACCATGTGCAGATCGACGTCCCGGAGACGCTCGGCCTTTCCACTCGCGCCGCCTTTTACGAGACCACCGGCGCCTATCGT GACATGGTGGTGACCCACCTCTTCCAGATCCTCGCCTTCATGGCGATGGAGCCGCCCACTGCGCTTGAGCCTGCGCCAAT CTCGGAAGAGAAGAACAAGGTGTTCCGCTCCATGTTGCCGATTGAGCCGCGCGACGTGGTGCGCGGCCAATACATTGGCT ACCGTAATGAGCCTGGCGTCGATCCCGAAAGCGACACTGACACCTTCATCGCCCTAAAATGCGCGATCGACAACTGGCGC TGGGCCGGAGTGCCCTTCTACCTGCGTACAGGCAAGCGCATGGCCGAGGGGCAGCGCATTATTTCGATCGCATTCCGCGA GCCCCCGAAATCGATGTTCCCTGCGGGATCTGGCGTGGGGGCACAGGGCCCTGACCACCTCACCTTCGACCTCGCTGATT CCTCCAAGGTCTCGCTTTCCTTCTATGGCAAGCGCCCTGGCCCGGGCTTCCGGCTCGACAAGCTCTCGCTGCAATTCGCC ATGAGCGAAACCGGCCTGATTGGCGAAGTTCTGGAGGCTTATGAGCGTCTGATCCTCGACGCCATGCGCGGTGACCACAC GCTGTTCACTACGGCCGAGGGTATTGAGCGGCTCTGGGAGGTTTCCCAACCTCTCCTCGATAACCCACCGCCCGTACGCC TCTACGACCAGGGCGGCTGGGGGCCGAAGTCGATCCACCAACTCATTGCCCCGCACGCCTGGCGCCTGCCGTTCGAGCGC GCCTGGAGGGATGCGGCAAAAGGATGA
Upstream 100 bases:
>100_bases GAGCTTCAACGTCATGCCATCACGCACGAAGATAGCCGCTTCGCGGCAGCGCGGAGCTGGGGTCGACCTCCATCCCCAAG GGACAACGGAAGACTTGAGG
Downstream 100 bases:
>100_bases TTGACGGTCAAAAGTTGGAGCGATGCCGGCGGTCGGAATGGCGCCGACCAATTGCGAACAATCCCAATAAAATGACGTTG GCAGAGATGTGCAGGAAACG
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSVLRKNSTRVGPGYPQVVVLVGATGDLSRRKLLTGLFHLTNAGFIPGCRIIGVSLDDIDADAFRTIARDSLDKFLTRKF SQSEWEAFAASLDYVPLAAGANALKEAVDRAEEALGAETRRVHYLSVPPSAALLAVQLLAQAELTERSRIIMEKPFGTDL ASAVALNKKLHEVFDEKQIFRIDHFLGKEPAQNILAFRFANGLFEPIWNRNFIDHVQIDVPETLGLSTRAAFYETTGAYR DMVVTHLFQILAFMAMEPPTALEPAPISEEKNKVFRSMLPIEPRDVVRGQYIGYRNEPGVDPESDTDTFIALKCAIDNWR WAGVPFYLRTGKRMAEGQRIISIAFREPPKSMFPAGSGVGAQGPDHLTFDLADSSKVSLSFYGKRPGPGFRLDKLSLQFA MSETGLIGEVLEAYERLILDAMRGDHTLFTTAEGIERLWEVSQPLLDNPPPVRLYDQGGWGPKSIHQLIAPHAWRLPFER AWRDAAKG
Sequences:
>Translated_488_residues MSVLRKNSTRVGPGYPQVVVLVGATGDLSRRKLLTGLFHLTNAGFIPGCRIIGVSLDDIDADAFRTIARDSLDKFLTRKF SQSEWEAFAASLDYVPLAAGANALKEAVDRAEEALGAETRRVHYLSVPPSAALLAVQLLAQAELTERSRIIMEKPFGTDL ASAVALNKKLHEVFDEKQIFRIDHFLGKEPAQNILAFRFANGLFEPIWNRNFIDHVQIDVPETLGLSTRAAFYETTGAYR DMVVTHLFQILAFMAMEPPTALEPAPISEEKNKVFRSMLPIEPRDVVRGQYIGYRNEPGVDPESDTDTFIALKCAIDNWR WAGVPFYLRTGKRMAEGQRIISIAFREPPKSMFPAGSGVGAQGPDHLTFDLADSSKVSLSFYGKRPGPGFRLDKLSLQFA MSETGLIGEVLEAYERLILDAMRGDHTLFTTAEGIERLWEVSQPLLDNPPPVRLYDQGGWGPKSIHQLIAPHAWRLPFER AWRDAAKG >Mature_487_residues SVLRKNSTRVGPGYPQVVVLVGATGDLSRRKLLTGLFHLTNAGFIPGCRIIGVSLDDIDADAFRTIARDSLDKFLTRKFS QSEWEAFAASLDYVPLAAGANALKEAVDRAEEALGAETRRVHYLSVPPSAALLAVQLLAQAELTERSRIIMEKPFGTDLA SAVALNKKLHEVFDEKQIFRIDHFLGKEPAQNILAFRFANGLFEPIWNRNFIDHVQIDVPETLGLSTRAAFYETTGAYRD MVVTHLFQILAFMAMEPPTALEPAPISEEKNKVFRSMLPIEPRDVVRGQYIGYRNEPGVDPESDTDTFIALKCAIDNWRW AGVPFYLRTGKRMAEGQRIISIAFREPPKSMFPAGSGVGAQGPDHLTFDLADSSKVSLSFYGKRPGPGFRLDKLSLQFAM SETGLIGEVLEAYERLILDAMRGDHTLFTTAEGIERLWEVSQPLLDNPPPVRLYDQGGWGPKSIHQLIAPHAWRLPFERA WRDAAKG
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=501, Percent_Identity=28.7425149700599, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI109389365, Length=501, Percent_Identity=28.7425149700599, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI52145310, Length=480, Percent_Identity=28.75, Blast_Score=149, Evalue=5e-36, Organism=Escherichia coli, GI1788158, Length=468, Percent_Identity=37.6068376068376, Blast_Score=302, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17538218, Length=493, Percent_Identity=30.6288032454361, Blast_Score=241, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6324088, Length=491, Percent_Identity=31.1608961303462, Blast_Score=234, Evalue=3e-62, Organism=Drosophila melanogaster, GI24643352, Length=489, Percent_Identity=28.8343558282209, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24643350, Length=489, Percent_Identity=28.8343558282209, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI221513548, Length=468, Percent_Identity=27.5641025641026, Blast_Score=155, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54326; Mature: 54195
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLRKNSTRVGPGYPQVVVLVGATGDLSRRKLLTGLFHLTNAGFIPGCRIIGVSLDDID CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC ADAFRTIARDSLDKFLTRKFSQSEWEAFAASLDYVPLAAGANALKEAVDRAEEALGAETR HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC RVHYLSVPPSAALLAVQLLAQAELTERSRIIMEKPFGTDLASAVALNKKLHEVFDEKQIF EEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCHHHHH RIDHFLGKEPAQNILAFRFANGLFEPIWNRNFIDHVQIDVPETLGLSTRAAFYETTGAYR HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCHHHHHHHHCCHHH DMVVTHLFQILAFMAMEPPTALEPAPISEEKNKVFRSMLPIEPRDVVRGQYIGYRNEPGV HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC DPESDTDTFIALKCAIDNWRWAGVPFYLRTGKRMAEGQRIISIAFREPPKSMFPAGSGVG CCCCCCCCEEEEEEEECCCEECCCCEEECCCCHHHCCCEEEEEEECCCCHHHCCCCCCCC AQGPDHLTFDLADSSKVSLSFYGKRPGPGFRLDKLSLQFAMSETGLIGEVLEAYERLILD CCCCCCEEEEECCCCEEEEEEECCCCCCCCEEHHHEEEEHHCCCCHHHHHHHHHHHHHHH AMRGDHTLFTTAEGIERLWEVSQPLLDNPPPVRLYDQGGWGPKSIHQLIAPHAWRLPFER HHCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHH AWRDAAKG HHHHHCCC >Mature Secondary Structure SVLRKNSTRVGPGYPQVVVLVGATGDLSRRKLLTGLFHLTNAGFIPGCRIIGVSLDDID CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC ADAFRTIARDSLDKFLTRKFSQSEWEAFAASLDYVPLAAGANALKEAVDRAEEALGAETR HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC RVHYLSVPPSAALLAVQLLAQAELTERSRIIMEKPFGTDLASAVALNKKLHEVFDEKQIF EEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCHHHHH RIDHFLGKEPAQNILAFRFANGLFEPIWNRNFIDHVQIDVPETLGLSTRAAFYETTGAYR HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCHHHHHHHHCCHHH DMVVTHLFQILAFMAMEPPTALEPAPISEEKNKVFRSMLPIEPRDVVRGQYIGYRNEPGV HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC DPESDTDTFIALKCAIDNWRWAGVPFYLRTGKRMAEGQRIISIAFREPPKSMFPAGSGVG CCCCCCCCEEEEEEEECCCEECCCCEEECCCCHHHCCCEEEEEEECCCCHHHCCCCCCCC AQGPDHLTFDLADSSKVSLSFYGKRPGPGFRLDKLSLQFAMSETGLIGEVLEAYERLILD CCCCCCEEEEECCCCEEEEEEECCCCCCCCEEHHHEEEEHHCCCCHHHHHHHHHHHHHHH AMRGDHTLFTTAEGIERLWEVSQPLLDNPPPVRLYDQGGWGPKSIHQLIAPHAWRLPFER HHCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHH AWRDAAKG HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7870816 [H]