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The map label for this gene is 116249226

Identifier: 116249226

GI number: 116249226

Start: 613758

End: 614030

Strand: Reverse

Name: 116249226

Synonym: pRL120561A

Alternate gene names: NA

Gene position: 614030-613758 (Counterclockwise)

Preceding gene: 116249229

Following gene: 116249225

Centisome position: 70.58

GC content: 55.31

Gene sequence:

>273_bases
ATGGACGTTCGACAAACCATCGGCTGGAATCTCAGACGACTTCGTGTGGCCAAAGGTCTCTCTCAGGAAAGACTGGCTCT
CGAGGCCGAGATCGACCGCTCGTATGTCGGACGGGTCGAGAGAGGCATGGAAAATGTCACCGTCGCAACGCTCGAGGCGT
TTGCGAGGGTTCTTTCGGTGAACGTTTCAGCTTTATTCGCAGAAATTGATCCACGCGCTCCCAAGCCCAAGCCTCTTCGG
TCAGGCAGAAAACAAAAGGAACCCGGCAGGTGA

Upstream 100 bases:

>100_bases
GAGAGCTGACGGAGTTCCATGGGAGCGTCCTTTTTTGCAGCTTTAATATGGGACTATCAGTCCGTCGATTGTCAAGCCGT
GAATATGCGTTTGTTATGGG

Downstream 100 bases:

>100_bases
ATGGTGGAGCGTTTTCGTCCCTCTGGGCACCTTCAGCTTGGCCGCCTTGAAAGGTTCGAACTCGTGACCATCCTGTTGGC
CTTAATACGCAGCAAGGTTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Transcription Regulator Protein

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDVRQTIGWNLRRLRVAKGLSQERLALEAEIDRSYVGRVERGMENVTVATLEAFARVLSVNVSALFAEIDPRAPKPKPLR
SGRKQKEPGR

Sequences:

>Translated_90_residues
MDVRQTIGWNLRRLRVAKGLSQERLALEAEIDRSYVGRVERGMENVTVATLEAFARVLSVNVSALFAEIDPRAPKPKPLR
SGRKQKEPGR
>Mature_90_residues
MDVRQTIGWNLRRLRVAKGLSQERLALEAEIDRSYVGRVERGMENVTVATLEAFARVLSVNVSALFAEIDPRAPKPKPLR
SGRKQKEPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10157; Mature: 10157

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRQTIGWNLRRLRVAKGLSQERLALEAEIDRSYVGRVERGMENVTVATLEAFARVLSV
CCCCCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
NVSALFAEIDPRAPKPKPLRSGRKQKEPGR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVRQTIGWNLRRLRVAKGLSQERLALEAEIDRSYVGRVERGMENVTVATLEAFARVLSV
CCCCCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
NVSALFAEIDPRAPKPKPLRSGRKQKEPGR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA