| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249089
Identifier: 116249089
GI number: 116249089
Start: 457807
End: 458391
Strand: Reverse
Name: 116249089
Synonym: pRL120423
Alternate gene names: NA
Gene position: 458391-457807 (Counterclockwise)
Preceding gene: 116249090
Following gene: 116249087
Centisome position: 52.69
GC content: 59.83
Gene sequence:
>585_bases ATGATCATAAAACGGAGCCTGTCCTTCTTCCGCTTCGCCCGATCCCGCGCCCGTCATCTCCTGTGCGACCGGTCGGCGGC TTCGGGTGTGGAATTCGCGCTGGTGTTGCCGATCCTGGTGATGCTCCTGTTCGGCACCGTCGATCTCGGCCATGCACTCA CAGTCAGCCGAAAGATAGATGAGATCGCCTCTTCCACAGGCGACATGATTTCACAGCAGGGCTCCTGGACGAAATCCGAT GTCGCCAAGCTTCTCTCCGGCGCCAGCTTCATCCTGCAGCCCTATGACACGACCGGGCTGACGATCACGCTGGCGGTGGA CGATATCGCCAAGAGCGGCAGCGCGACGGTCAACTGGTCTGCAGCGCTCAACACCTCCGCTCTTACCTCCGGCTCGGCGA GCACAATCGAGGTCCCTTCGGAGATCCAGGATGACGGCGTGCAGGTGGTGCTGACCCGGGTGCAGTACACATTGACGACG CCGGTCTCGGCGTTCTTTTCGAATTTCACCGGGCAGAATGGCTACAGCTTCGATCGCCATTACTTCAATCGCCCGAGGGT CGGCGACACGATCACTTACAACTAA
Upstream 100 bases:
>100_bases ACAGCCGTCGTCAATTTCTTCAGCCTGTCGAGCGCCAAGCTTTCGGACGGCCGCTACCTGCTCGGATCTTCCGTTCTGTT CCGCAACGAGCCTTTCTGAC
Downstream 100 bases:
>100_bases ACCGGAAATCGAAGCCCTGCGGGACGACAGCCCAGGCTCACTTGGGCAGCTTGACTATGCCGTATGGGTTGAACTTGAAC TCATCCGGTTCGTAAGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: TadE-Like Pilus Assembly Protein; Transmembrane Protein; Flp Pilus Assembly Protein TadG; TadE-Like; Tade Family Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIIKRSLSFFRFARSRARHLLCDRSAASGVEFALVLPILVMLLFGTVDLGHALTVSRKIDEIASSTGDMISQQGSWTKSD VAKLLSGASFILQPYDTTGLTITLAVDDIAKSGSATVNWSAALNTSALTSGSASTIEVPSEIQDDGVQVVLTRVQYTLTT PVSAFFSNFTGQNGYSFDRHYFNRPRVGDTITYN
Sequences:
>Translated_194_residues MIIKRSLSFFRFARSRARHLLCDRSAASGVEFALVLPILVMLLFGTVDLGHALTVSRKIDEIASSTGDMISQQGSWTKSD VAKLLSGASFILQPYDTTGLTITLAVDDIAKSGSATVNWSAALNTSALTSGSASTIEVPSEIQDDGVQVVLTRVQYTLTT PVSAFFSNFTGQNGYSFDRHYFNRPRVGDTITYN >Mature_194_residues MIIKRSLSFFRFARSRARHLLCDRSAASGVEFALVLPILVMLLFGTVDLGHALTVSRKIDEIASSTGDMISQQGSWTKSD VAKLLSGASFILQPYDTTGLTITLAVDDIAKSGSATVNWSAALNTSALTSGSASTIEVPSEIQDDGVQVVLTRVQYTLTT PVSAFFSNFTGQNGYSFDRHYFNRPRVGDTITYN
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21013; Mature: 21013
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKRSLSFFRFARSRARHLLCDRSAASGVEFALVLPILVMLLFGTVDLGHALTVSRKID CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EIASSTGDMISQQGSWTKSDVAKLLSGASFILQPYDTTGLTITLAVDDIAKSGSATVNWS HHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECHHHCCCCCEEEEE AALNTSALTSGSASTIEVPSEIQDDGVQVVLTRVQYTLTTPVSAFFSNFTGQNGYSFDRH EECCCHHCCCCCCCEEECCHHHHHCCHHEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCHH YFNRPRVGDTITYN HCCCCCCCCEECCC >Mature Secondary Structure MIIKRSLSFFRFARSRARHLLCDRSAASGVEFALVLPILVMLLFGTVDLGHALTVSRKID CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EIASSTGDMISQQGSWTKSDVAKLLSGASFILQPYDTTGLTITLAVDDIAKSGSATVNWS HHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECHHHCCCCCEEEEE AALNTSALTSGSASTIEVPSEIQDDGVQVVLTRVQYTLTTPVSAFFSNFTGQNGYSFDRH EECCCHHCCCCCCCEEECCHHHHHCCHHEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCHH YFNRPRVGDTITYN HCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA