| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249090
Identifier: 116249090
GI number: 116249090
Start: 458393
End: 458923
Strand: Reverse
Name: 116249090
Synonym: pRL120424
Alternate gene names: NA
Gene position: 458923-458393 (Counterclockwise)
Preceding gene: 116249091
Following gene: 116249089
Centisome position: 52.75
GC content: 58.0
Gene sequence:
>531_bases ATGAGGCGAGGGAAACACTTCGCATCGTTGCGCCGTCTGCTTGGCGACCGCAAAGGGGTCGCAGCGATCGAATTTGCGAT CCTGGCTCTGCCGCTCTTCATCATGATATTCGGCATTATCGAAGTGTCGCTAATGTTCTTCGTCAACTCGGCGCTGGACG CTTCGGTGCACAAGATCTCCCGGATGATCCGCACCGGCGAGGTTGCGTCCTCCAACATCACGCTGGCCGATTTCAAGGCC GGGATTTGCAACGACATGCTTCTCTCGTTCAGCTGCTCCAGCGGTCTGCTGGTCAAGGTGAACGTGCTTTCCGACCTCTC GTCCGCCGCCAGCGCCGACCCCATCGACGACAGCGGCAATCTCACTGTCACCGAGACCTATGATATCGGCAAGGGCAGCG ACTACATCCTGGTTCAGACATTCCTGCCATGGACAGCCGTCGTCAATTTCTTCAGCCTGTCGAGCGCCAAGCTTTCGGAC GGCCGCTACCTGCTCGGATCTTCCGTTCTGTTCCGCAACGAGCCTTTCTGA
Upstream 100 bases:
>100_bases CCTCCAAGAGCCTGTTCATATCCGCGTCGTCGTCGACCGAGATCACCGCAGGTCTGTCGGCGCTTTTCACCCAATATCTC GCATCCGTCCGGCTGACCCA
Downstream 100 bases:
>100_bases CATGATCATAAAACGGAGCCTGTCCTTCTTCCGCTTCGCCCGATCCCGCGCCCGTCATCTCCTGTGCGACCGGTCGGCGG CTTCGGGTGTGGAATTCGCG
Product: putative transmembrane protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like; TadE-Like Protein; TadG-Like Pilus Assembly Protein; Transmembrane Protein; Signal Peptide; Tade Family Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRRGKHFASLRRLLGDRKGVAAIEFAILALPLFIMIFGIIEVSLMFFVNSALDASVHKISRMIRTGEVASSNITLADFKA GICNDMLLSFSCSSGLLVKVNVLSDLSSAASADPIDDSGNLTVTETYDIGKGSDYILVQTFLPWTAVVNFFSLSSAKLSD GRYLLGSSVLFRNEPF
Sequences:
>Translated_176_residues MRRGKHFASLRRLLGDRKGVAAIEFAILALPLFIMIFGIIEVSLMFFVNSALDASVHKISRMIRTGEVASSNITLADFKA GICNDMLLSFSCSSGLLVKVNVLSDLSSAASADPIDDSGNLTVTETYDIGKGSDYILVQTFLPWTAVVNFFSLSSAKLSD GRYLLGSSVLFRNEPF >Mature_176_residues MRRGKHFASLRRLLGDRKGVAAIEFAILALPLFIMIFGIIEVSLMFFVNSALDASVHKISRMIRTGEVASSNITLADFKA GICNDMLLSFSCSSGLLVKVNVLSDLSSAASADPIDDSGNLTVTETYDIGKGSDYILVQTFLPWTAVVNFFSLSSAKLSD GRYLLGSSVLFRNEPF
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19097; Mature: 19097
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGKHFASLRRLLGDRKGVAAIEFAILALPLFIMIFGIIEVSLMFFVNSALDASVHKIS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMIRTGEVASSNITLADFKAGICNDMLLSFSCSSGLLVKVNVLSDLSSAASADPIDDSGN HHHHHCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCC LTVTETYDIGKGSDYILVQTFLPWTAVVNFFSLSSAKLSDGRYLLGSSVLFRNEPF EEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCC >Mature Secondary Structure MRRGKHFASLRRLLGDRKGVAAIEFAILALPLFIMIFGIIEVSLMFFVNSALDASVHKIS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMIRTGEVASSNITLADFKAGICNDMLLSFSCSSGLLVKVNVLSDLSSAASADPIDDSGN HHHHHCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCC LTVTETYDIGKGSDYILVQTFLPWTAVVNFFSLSSAKLSDGRYLLGSSVLFRNEPF EEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA