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The map label for this gene is ycaK [C]

Identifier: 116248979

GI number: 116248979

Start: 328860

End: 329441

Strand: Direct

Name: ycaK [C]

Synonym: pRL120310

Alternate gene names: 116248979

Gene position: 328860-329441 (Clockwise)

Preceding gene: 116248978

Following gene: 116248982

Centisome position: 37.8

GC content: 60.82

Gene sequence:

>582_bases
ATGAGGGTTCTCGTCCTCCACTCTCACCCGGTCGAGGAAAGTTATGGCAAGGCGCTTTACCGGCAAACCGTCGAGAGCCT
GCAGAAGGCCGGGCATATGGTGGATGGCTGCGACCTCTATGAAGAGCGGTTCGATCCGGTGCTCTCGCGCCACGACCGGC
TCGCCTATCACGACTATCCGGAAAATCTGAAGCTGGTGGAATCGCATGTCGAAAGGTTGAAGGCGGCCGAGGGGCTGGTG
ATCTGCACCCCGATCTGGAACTTCGGCTTTCCGGCGATCCTCAAGGGATATTTCGACCGAGTCTGGCTGCCGGGCGTTTC
CTTCGAGCTGGTCAACGGCAAGGTGGAATCGCGGCTGCGCCACATCCGCAAGCTCGCAGCCGTCCTGACCTACGGCGCAA
CGCCCTTCCGGGCCTTCGCTGCCGGCAACCCTCCAAAGAAAATCGTCAAGCGCGTGCTGAGGGCGCAGATCAATCCAGTG
AGGCCGGTGACGTTCCTGGCCCATTACGACATGAACAATTGCACGCCGGAAACGCGGGCAAAATTCCTCGCCCGCGTCGG
AGGGGCGATGGAGCGCTTTTAG

Upstream 100 bases:

>100_bases
TCAATCCCGGCAAGATGATCGCCTGGGAAAATCCCGATTTCGATTTCAACGCCGGCAAGAACTATCTCTTCCCCGGCCTG
GCGGCCCTGATGGAGGCCTC

Downstream 100 bases:

>100_bases
AAGATTTTCGCGGCCGTCACCTCGACTTCGACGAGGAACTCAGGGCGGGTAAAGCCGCCGATGACGAGCAAGGTGGAAAC
CGGCTTTGGATCGAGCGTAT

Product: putative flavodoxin containing oxidoreductase

Products: NA

Alternate protein names: NAD(P)H Dehydrogenase Protein; NAD(P)H Dehydrogenase Quinone Family; NAD(P)H Oxidoreductase; NADPH-Quinone Reductase; Oxidoreductase; Oxidoreductase Protein; NADPH-Dependent FMN Reductase; Flavodoxin; Quinone Family NAD(P)H Dehydrogenase; Ribosyldihydronicotinamide Dehydrogenase; Flavodoxin Containing Oxidoreductase; NAD(P)H Quinone Oxidoreductase; NAD(P)H Dehydrogenase Quinone Family Protein; Quinone Dependent NADH Dehydrogenase; NAD(P)H Oxidoreductase YcaK; Quinone Dependent NAD(P)H Dehydrogenase; Flavodoxin-Like Fold Subfamily; Flavodoxin-Like Fold Domain Protein; NADPH-Quinone Reductase YabF Family

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRVLVLHSHPVEESYGKALYRQTVESLQKAGHMVDGCDLYEERFDPVLSRHDRLAYHDYPENLKLVESHVERLKAAEGLV
ICTPIWNFGFPAILKGYFDRVWLPGVSFELVNGKVESRLRHIRKLAAVLTYGATPFRAFAAGNPPKKIVKRVLRAQINPV
RPVTFLAHYDMNNCTPETRAKFLARVGGAMERF

Sequences:

>Translated_193_residues
MRVLVLHSHPVEESYGKALYRQTVESLQKAGHMVDGCDLYEERFDPVLSRHDRLAYHDYPENLKLVESHVERLKAAEGLV
ICTPIWNFGFPAILKGYFDRVWLPGVSFELVNGKVESRLRHIRKLAAVLTYGATPFRAFAAGNPPKKIVKRVLRAQINPV
RPVTFLAHYDMNNCTPETRAKFLARVGGAMERF
>Mature_193_residues
MRVLVLHSHPVEESYGKALYRQTVESLQKAGHMVDGCDLYEERFDPVLSRHDRLAYHDYPENLKLVESHVERLKAAEGLV
ICTPIWNFGFPAILKGYFDRVWLPGVSFELVNGKVESRLRHIRKLAAVLTYGATPFRAFAAGNPPKKIVKRVLRAQINPV
RPVTFLAHYDMNNCTPETRAKFLARVGGAMERF

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22033; Mature: 22033

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVLHSHPVEESYGKALYRQTVESLQKAGHMVDGCDLYEERFDPVLSRHDRLAYHDYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
ENLKLVESHVERLKAAEGLVICTPIWNFGFPAILKGYFDRVWLPGVSFELVNGKVESRLR
CHHHHHHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
HIRKLAAVLTYGATPFRAFAAGNPPKKIVKRVLRAQINPVRPVTFLAHYDMNNCTPETRA
HHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCHHHHH
KFLARVGGAMERF
HHHHHHHHHHHCC
>Mature Secondary Structure
MRVLVLHSHPVEESYGKALYRQTVESLQKAGHMVDGCDLYEERFDPVLSRHDRLAYHDYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
ENLKLVESHVERLKAAEGLVICTPIWNFGFPAILKGYFDRVWLPGVSFELVNGKVESRLR
CHHHHHHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
HIRKLAAVLTYGATPFRAFAAGNPPKKIVKRVLRAQINPVRPVTFLAHYDMNNCTPETRA
HHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCHHHHH
KFLARVGGAMERF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA