| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248982
Identifier: 116248982
GI number: 116248982
Start: 332109
End: 332828
Strand: Direct
Name: 116248982
Synonym: pRL120313
Alternate gene names: NA
Gene position: 332109-332828 (Clockwise)
Preceding gene: 116248979
Following gene: 116248985
Centisome position: 38.17
GC content: 61.25
Gene sequence:
>720_bases ATGCACCAACCTGAAGATCATCCTGCCGGCATTGAAATCGCGCTTTGGCCGTATTCCAAGATCGAAGGAGACTGGAACCG CTGGATGCAGTCGCTTTCACCGGATGAACGGGAGCGCGGTGCGACGTACCGTTTTGACCGGGATCGGGCCTCGTTCGTTG CCGGCCGGTATCTCCTGCGGCGGCTATTGAGCGTGCATACCGGGATATCGCCGAGCAAGCTCCTGTTGTCCCCGGACAAC CGTGGCAAGCTGAGGCTTGAGGGGCGTGAGAGGCCGCATTTCAGCCTCGCAAATACCGACGGGCTTGTGGCGGTCGCTGT CGCTTCAGGATGTGACCACCTGGGAATAGACTGCGAACGCGCCGATACCGAGATCGAAGCGGCGGCAGTGGATAGCTATT GCAGTGCAGACGAACGGCGCTGCCTTGCGGAATTGCCTGCGCGCGAACGCACGCGCGCGGCCATTGCACTCTGGACGCTC AAGGAGAGCCATCTGAAGGCACTCGGCGTCGGGCTGCGCGAGAATCCCCGCAACGTCGCCTTTTCCTGGAAGGATGGTAT CCCAGTCATGGTCGATGGTGGCGATCGCGATCGGCGATGGCATCATCGTCTGGTCGAAAGCGGCAGCCAGCACGTCGTCG CGCTGGCTGCTTGCTCGCAATCCGGGTTCCCCGGCATTTCGACACGCCTATTTCAGGACGATAGCATGCCGTCCGAATAG
Upstream 100 bases:
>100_bases GAAGATCTTCTGAGTTGACCAATACTTCCGCGATCAATTAAACGCGTTACGACCCTGAGTTCTTGAAAATTCAGGGAGAT AGCAGCCACGGCGAGCGAAA
Downstream 100 bases:
>100_bases CCGGCGCGGAGCTGATGAGGCATTGCGGACGCGGTCTCCGTCGCCCAGGCGAGTTGCCCATTGTCGGGTTCTGCATTGAA ATGCTGCCGGCCGAGAAGCG
Product: putative 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Phosphopantetheinyl Transferase Protein; 4-Phosphopantetheinyl Transferase Family Protein; Phosphopantetheinyl Transferase; 4-Phosphopantetheinyl Transferase Superfamily Protein; Phosphopantetheinyltransferase Family Protein; 4-Phosphopantetheinyl Transferase Superfamily; HetI Protein; 4-Phosphopantetheinyl Transferase MtaA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MHQPEDHPAGIEIALWPYSKIEGDWNRWMQSLSPDERERGATYRFDRDRASFVAGRYLLRRLLSVHTGISPSKLLLSPDN RGKLRLEGRERPHFSLANTDGLVAVAVASGCDHLGIDCERADTEIEAAAVDSYCSADERRCLAELPARERTRAAIALWTL KESHLKALGVGLRENPRNVAFSWKDGIPVMVDGGDRDRRWHHRLVESGSQHVVALAACSQSGFPGISTRLFQDDSMPSE
Sequences:
>Translated_239_residues MHQPEDHPAGIEIALWPYSKIEGDWNRWMQSLSPDERERGATYRFDRDRASFVAGRYLLRRLLSVHTGISPSKLLLSPDN RGKLRLEGRERPHFSLANTDGLVAVAVASGCDHLGIDCERADTEIEAAAVDSYCSADERRCLAELPARERTRAAIALWTL KESHLKALGVGLRENPRNVAFSWKDGIPVMVDGGDRDRRWHHRLVESGSQHVVALAACSQSGFPGISTRLFQDDSMPSE >Mature_239_residues MHQPEDHPAGIEIALWPYSKIEGDWNRWMQSLSPDERERGATYRFDRDRASFVAGRYLLRRLLSVHTGISPSKLLLSPDN RGKLRLEGRERPHFSLANTDGLVAVAVASGCDHLGIDCERADTEIEAAAVDSYCSADERRCLAELPARERTRAAIALWTL KESHLKALGVGLRENPRNVAFSWKDGIPVMVDGGDRDRRWHHRLVESGSQHVVALAACSQSGFPGISTRLFQDDSMPSE
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26711; Mature: 26711
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQPEDHPAGIEIALWPYSKIEGDWNRWMQSLSPDERERGATYRFDRDRASFVAGRYLLR CCCCCCCCCCEEEEECCCHHCCCCHHHHHHHCCCCHHHCCCCEEECCHHHHHHHHHHHHH RLLSVHTGISPSKLLLSPDNRGKLRLEGRERPHFSLANTDGLVAVAVASGCDHLGIDCER HHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC ADTEIEAAAVDSYCSADERRCLAELPARERTRAAIALWTLKESHLKALGVGLRENPRNVA CCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHCEEEEEEEECHHHHHHHCCCCCCCCCCEE FSWKDGIPVMVDGGDRDRRWHHRLVESGSQHVVALAACSQSGFPGISTRLFQDDSMPSE EEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MHQPEDHPAGIEIALWPYSKIEGDWNRWMQSLSPDERERGATYRFDRDRASFVAGRYLLR CCCCCCCCCCEEEEECCCHHCCCCHHHHHHHCCCCHHHCCCCEEECCHHHHHHHHHHHHH RLLSVHTGISPSKLLLSPDNRGKLRLEGRERPHFSLANTDGLVAVAVASGCDHLGIDCER HHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC ADTEIEAAAVDSYCSADERRCLAELPARERTRAAIALWTLKESHLKALGVGLRENPRNVA CCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHCEEEEEEEECHHHHHHHCCCCCCCCCCEE FSWKDGIPVMVDGGDRDRRWHHRLVESGSQHVVALAACSQSGFPGISTRLFQDDSMPSE EEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA