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The map label for this gene is pauA [C]

Identifier: 116248848

GI number: 116248848

Start: 177801

End: 179906

Strand: Direct

Name: pauA [C]

Synonym: pRL120177

Alternate gene names: 116248848

Gene position: 177801-179906 (Clockwise)

Preceding gene: 116248847

Following gene: 116248852

Centisome position: 20.44

GC content: 63.15

Gene sequence:

>2106_bases
ATGCCCGCAAACACGATCGATGCCATGCGGGCTTTGATGGCGCCGCGCTCCGTCGCGGTCGTCGGTGCCACCGAGCGCGC
CGACGCCTCGTCAAGCTACGTGATGAAGAACCTGATGCGCTTCGGGTATCAGGGAAAGATCATCCCTGTGCATCCTAAGG
CGGAGGCAGTCTTCGGTTATCGCGCTGCCCCTTCCCTGCGCGCACTCGACGCCGCCCCGGACGTTGCCGTGATCGGCATC
GCCGCCGACAAGGTGATCGCAGCGCTGGAAGAGGCAGGCAGCACCGGCGTCAAGGCCGCCGTCGTTTTGGCCTCCGGTTT
TGCCGAATTGGACGAAGCCGGCCGCGAACGCCAGCGACAACTGGTCGAGATCGCCGGGCGCTACGGCATGGCCATCTGTG
GCCCCAATTGCCTTGGTCTTTTCAATCTCACATCAGGCGCGGCCCTTTATTCCTCCAGTCTTTCGGCCAATCTCCAGAAG
GGCCGTTTTGCGATCCTCTCCCATTCTGGCGCCAGCGCCATCGCGCTCGGCAATACCGCCCGCTTCGGCCTCAGCCACAT
CGTCTCCTCCGGCAATAGCGCTGCAACCGACATTCCCGCCTATCTCGAATTTCTGGCAAGCGACGAAGACACCGGCACGG
TCGGTATCGTCATCGAAGCCATTCGCGCGCCGGAGGAACTGGCAGCGGCCATGGAAAAAATGCACGCGGCCAACAAACCA
GTCATTGCGCTGCGTGCTGGCCGCTCCAGCCGCGGCGCCCAGGCGACGGCTGCCCACACCGGCTCACTCGCTGGCAGCAA
CGATGCCTACCGCGCTTTCTTCCGCCGCACCGGCATCATAGAAGTGCCGGACATGGACGGCTTCATGGAAACGGCAACGC
TATGCCTGACGTTGAAGACACGCCCGGTAAAACCCGGTGTCGCGATCGTCGGCGTGTCCGGCGGTGGTGTCGCGCATGTC
TCCGACGTTGCCGATGAAGCCGGCCTTTCGATGCCGGACCTGCGGCCCGAGACGGTCGCGAAGATGAAGACGCTGCTGCC
GTCCTTCGCCACGCCGCAGAACCCGCTCGATACGACCGGCATCGTTTTTGCCGACGGCCAAATCTACCGCGACGTGCTGA
CCGCCGTGTCCGAAGATCCATCGATCGGGCTGATCGTCGCCTCGCAGGATGCGCCGGTCGGACTAGACGACTTCTGCGCC
TGCGAATATCTCGGCATCGCCCAGGCGGTGTCGGATTATGCCGAAGCGGGCAAGGCACCGATCGTGTTCATGAGCAACCT
CTCCTCCGGCCACCATCCGGCCGTCGAAGGGAAGCTGTCGAACGTGCCTGTCCTGCGCGGCACGAAAAGCGCCTTGACCG
CTATCAAAAGTCTGATCGATCAGAACCGGCTTGTATCATGGCCCGGAGCTGCAGCCTCCGACAGAAAATCCTTGCCTGCG
GGTGCTTTGACCGAACGCCAAGCCAAAAACCTGCTGGCTGCGGAGGGACTGCCTGTTCCGCAACAATACCTCGTCACCAG
CGCCGATAAAGCCGCCAGCGCGGCCGCAAAACTCAGCTTCCCGGTGGTGATGAAGATCGAGTCGCCGGATATCCAGCATA
AGACCGAGGCCGGCGGCGTAAAACTCGGCGTCGCCTCGGAACCGGAGGTTCGGCAAGCCTTCGACGCGATCATGGCAAGC
GCCCGGGCCTACGCCCCGGATGCGGATCTGCGTGGCGTATCGGTGCAGGAAATGGTGACTGGCGGCGTGGAAGCGCTGGT
CGGGCTTGTTCGCCACGAGCCCTTCGGTTTCGGCCTTGTCGTCGGCATCGGTGGCGTGCTGGTGGAACTGGTCAATGATA
GTGCCTTCGACCTTCTGCCTATCGATCTCGCCCGCGCCGACGCTATGATCGGCAAAACCAAGCTCGCCTCACTGCTGGAG
GGCTATCGCGGCTCACCAAGGGCCGATCGCCAGGCGCTGGCAAAATTGCTGGTCAAGCTTTCGGATTTCGCCGCCCGTTA
TGGCGACGATATCGAGGCTGTCGACCTCAATCCGGTCGCCGTTCTGCCGGATGGCGAGGGCGTGCGCATTCTCGACGCGC
TGATCATCGCGCGCGCGAAGACGTGA

Upstream 100 bases:

>100_bases
GCGGGTCGTGACTGGATGGCCAACCTCGCAAAGATGTCGCTGAAGGAATATCTCGCTTTCCGCGACAATCCGTTCAAGGG
CCTCGACTGAGGTCCTGGCC

Downstream 100 bases:

>100_bases
CGAGCAGACCCGGCGCAGCTTCGGCTGCCGTATCCGCGCGACCGAGCCAGGAGAGCCGTTCCGTCAGCAGCGCATAAAAG
CCGTCGGCGTCGACGTCGCG

Product: putative pimeloyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 700

Protein sequence:

>701_residues
MPANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPKAEAVFGYRAAPSLRALDAAPDVAVIGI
AADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQLVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQK
GRFAILSHSGASAIALGNTARFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAANKP
VIALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIEVPDMDGFMETATLCLTLKTRPVKPGVAIVGVSGGGVAHV
SDVADEAGLSMPDLRPETVAKMKTLLPSFATPQNPLDTTGIVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFCA
CEYLGIAQAVSDYAEAGKAPIVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSLIDQNRLVSWPGAAASDRKSLPA
GALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPVVMKIESPDIQHKTEAGGVKLGVASEPEVRQAFDAIMAS
ARAYAPDADLRGVSVQEMVTGGVEALVGLVRHEPFGFGLVVGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKLASLLE
GYRGSPRADRQALAKLLVKLSDFAARYGDDIEAVDLNPVAVLPDGEGVRILDALIIARAKT

Sequences:

>Translated_701_residues
MPANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPKAEAVFGYRAAPSLRALDAAPDVAVIGI
AADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQLVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQK
GRFAILSHSGASAIALGNTARFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAANKP
VIALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIEVPDMDGFMETATLCLTLKTRPVKPGVAIVGVSGGGVAHV
SDVADEAGLSMPDLRPETVAKMKTLLPSFATPQNPLDTTGIVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFCA
CEYLGIAQAVSDYAEAGKAPIVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSLIDQNRLVSWPGAAASDRKSLPA
GALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPVVMKIESPDIQHKTEAGGVKLGVASEPEVRQAFDAIMAS
ARAYAPDADLRGVSVQEMVTGGVEALVGLVRHEPFGFGLVVGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKLASLLE
GYRGSPRADRQALAKLLVKLSDFAARYGDDIEAVDLNPVAVLPDGEGVRILDALIIARAKT
>Mature_700_residues
PANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPKAEAVFGYRAAPSLRALDAAPDVAVIGIA
ADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQLVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQKG
RFAILSHSGASAIALGNTARFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAANKPV
IALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIEVPDMDGFMETATLCLTLKTRPVKPGVAIVGVSGGGVAHVS
DVADEAGLSMPDLRPETVAKMKTLLPSFATPQNPLDTTGIVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFCAC
EYLGIAQAVSDYAEAGKAPIVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSLIDQNRLVSWPGAAASDRKSLPAG
ALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPVVMKIESPDIQHKTEAGGVKLGVASEPEVRQAFDAIMASA
RAYAPDADLRGVSVQEMVTGGVEALVGLVRHEPFGFGLVVGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKLASLLEG
YRGSPRADRQALAKLLVKLSDFAARYGDDIEAVDLNPVAVLPDGEGVRILDALIIARAKT

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=700, Percent_Identity=24.5714285714286, Blast_Score=191, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 72714; Mature: 72583

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPKAEAVFGY
CCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHEECC
RAAPSLRALDAAPDVAVIGIAADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQ
CCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
LVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQKGRFAILSHSGASAIALGNTA
HHHHHHHCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCH
RFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAANKP
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCC
VIALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIEVPDMDGFMETATLCLTLKT
EEEEECCCCCCCCCEEHHCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHEEEEEEEEC
RPVKPGVAIVGVSGGGVAHVSDVADEAGLSMPDLRPETVAKMKTLLPSFATPQNPLDTTG
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
IVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFCACEYLGIAQAVSDYAEAGKAP
EEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSLIDQNRLVSWPGAAASDRKSLPA
EEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
GALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPVVMKIESPDIQHKTEAGGV
CHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
KLGVASEPEVRQAFDAIMASARAYAPDADLRGVSVQEMVTGGVEALVGLVRHEPFGFGLV
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCHH
VGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKLASLLEGYRGSPRADRQALAKLLVKL
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SDFAARYGDDIEAVDLNPVAVLPDGEGVRILDALIIARAKT
HHHHHHHCCCCEEECCCCEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPKAEAVFGY
CCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHEECC
RAAPSLRALDAAPDVAVIGIAADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQ
CCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
LVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQKGRFAILSHSGASAIALGNTA
HHHHHHHCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCH
RFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAANKP
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCC
VIALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIEVPDMDGFMETATLCLTLKT
EEEEECCCCCCCCCEEHHCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHEEEEEEEEC
RPVKPGVAIVGVSGGGVAHVSDVADEAGLSMPDLRPETVAKMKTLLPSFATPQNPLDTTG
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
IVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFCACEYLGIAQAVSDYAEAGKAP
EEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSLIDQNRLVSWPGAAASDRKSLPA
EEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
GALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPVVMKIESPDIQHKTEAGGV
CHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
KLGVASEPEVRQAFDAIMASARAYAPDADLRGVSVQEMVTGGVEALVGLVRHEPFGFGLV
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCHH
VGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKLASLLEGYRGSPRADRQALAKLLVKL
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SDFAARYGDDIEAVDLNPVAVLPDGEGVRILDALIIARAKT
HHHHHHHCCCCEEECCCCEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]