Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 116248746

GI number: 116248746

Start: 72354

End: 72944

Strand: Direct

Name: uidR [C]

Synonym: pRL120070

Alternate gene names: 116248746

Gene position: 72354-72944 (Clockwise)

Preceding gene: 116248744

Following gene: 116248747

Centisome position: 8.32

GC content: 62.27

Gene sequence:

>591_bases
ATGATCTCACCTGCAATCCCGACGCGCCAACGCATCATATCGGCCGCCGCCAAGCTGTTTTACAACGAGGGCATCAGGAG
CGTCAGCGTCGATGCGGTGGCTGAAGAGGCCGGCGTCACGAAACGCACCCTTTACTACCATTTCGCCAGCAAGGACGACC
TCATCGGGGCCTACCTGGAGGCGCGCGACCAGCCCAACCTCGCTCTGTTCAAACGCTGGTACGCGGAAACGACGGGCGAA
CCGGCGGATAAGGTGCAAGGCATCTTTCGCAATCTCGCCCGCGCAGCCCGCCACCCGAAATGGAAGGGCTGCGGCTTCCT
GCGCACCTCTGCGGAACTCGTCAATATGCCCGGCCATCCAGCCATGAAAGTCGGGATTGAACACAAGAAGAGGGTCGAGG
CCTGGTTGCGGGTGAGGTTCGAGGCGGCCGGCATCAAGGCGGAAGCGCCGCAGCTCGCCCGGCAGATCGTCCTGCTGCTT
GATGGCTCCTTCGCCGTCGTTCTGTTGCATCGCGATCCGACCTACATGGAAGCGGCAGGCGAGGCGGCTGGTTCACTGAT
CCGTGCTGCGACCGCAAACGCAAATGCGTAA

Upstream 100 bases:

>100_bases
AGTGTCGGCCATTCGGTTTTCCTTTCCGGTATGCTGCGTCAGGAGAAGTATGCCGCCGGTCGATGCTTGTGTATATTCAC
TAGTCGGTATACATAACGGC

Downstream 100 bases:

>100_bases
GGCGCTCGCTCTGAAGACCGCATCCTTCGCCTTCGGCATGGCCTGAGGTCGCTGAGCGGGAAGGGCATGATGTTGAGCCT
CTAAACAACAAAACAATGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Regulatory Protein; Transcriptional Regulator Protein; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcription Regulator TetR; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLYYHFASKDDLIGAYLEARDQPNLALFKRWYAETTGE
PADKVQGIFRNLARAARHPKWKGCGFLRTSAELVNMPGHPAMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLL
DGSFAVVLLHRDPTYMEAAGEAAGSLIRAATANANA

Sequences:

>Translated_196_residues
MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLYYHFASKDDLIGAYLEARDQPNLALFKRWYAETTGE
PADKVQGIFRNLARAARHPKWKGCGFLRTSAELVNMPGHPAMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLL
DGSFAVVLLHRDPTYMEAAGEAAGSLIRAATANANA
>Mature_196_residues
MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLYYHFASKDDLIGAYLEARDQPNLALFKRWYAETTGE
PADKVQGIFRNLARAARHPKWKGCGFLRTSAELVNMPGHPAMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLL
DGSFAVVLLHRDPTYMEAAGEAAGSLIRAATANANA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21514; Mature: 21514

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLYYHFASKDDLIGAYLE
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEEEEECCCCCHHHHHHH
ARDQPNLALFKRWYAETTGEPADKVQGIFRNLARAARHPKWKGCGFLRTSAELVNMPGHP
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCCC
AMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLLDGSFAVVLLHRDPTYMEAAG
CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCEEEEEEECCCCHHHHHH
EAAGSLIRAATANANA
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLYYHFASKDDLIGAYLE
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEEEEECCCCCHHHHHHH
ARDQPNLALFKRWYAETTGEPADKVQGIFRNLARAARHPKWKGCGFLRTSAELVNMPGHP
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCCC
AMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLLDGSFAVVLLHRDPTYMEAAG
CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCEEEEEEECCCCHHHHHH
EAAGSLIRAATANANA
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA