| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248736
Identifier: 116248736
GI number: 116248736
Start: 59757
End: 60650
Strand: Reverse
Name: 116248736
Synonym: pRL120060
Alternate gene names: NA
Gene position: 60650-59757 (Counterclockwise)
Preceding gene: 116248737
Following gene: 116248735
Centisome position: 6.97
GC content: 61.41
Gene sequence:
>894_bases ATGGTCTTTCAGAGACCGAGTGTGTTCTTGATGTCGAAGCCGCGCACGAAGCTACCCTTCTCCGAAGAGACCTTGCAGGC CATGCTGATCCGCGTGCTTCGCCCGCTGGTCAAGCTCGCACTCGCCTCCGGCTTCAACTTCATCGCTTTTTCGACCGTTC TTCGCCGCCTTTATATCGAGGTCGCAGAGAAGGAATTCGCGCTGCCGAACAAGAGCCAGACGGATAGCCGCATCTCGCTC CTGACCGGCATTCACCGCAAGGACGTCAACCGGCTGCGCGGACAGGTGCTTGCGGCATCCTTCCTGACCACCGGCGTTTC GCAGACGAGCCGCATTCTCGCCAGATGGCTTGCCGATCCGTTTTATTGCGATGCGGAGGATCGGCCGAGTGCCCTGCCCC GGACCTCCAGCGACGGCGGTCCGTCATTCGAGAGCCTGGTGAGCGACATCACCAAGGACGTCCACCCCCGCTCCATCCTG GACGACTGGCTGGACAAAGGCATCGTCGTTGTCGATCAGAACGGCTGGATCCAGCTCGATCTCTCATCGATCGTCCCCAA TGCCGGCGACGAGGCCCGCCGGCATTATTTTACCCGCAACCTCCGTGACCATGTGCAGGCGTCGGTCATGAACCTGATGA ACGAGCCTCCTCCGAACTTCGAACGCGCCGTCCATTATGACGGGATATCGCCCGTTCTGGCGGCCCGGCTCGACGAGATC GCGCGCGCGGAAGGAATGGCGCTGCTCCTGAAACTCAACAAGATCGCCCATCAGGCCATCAAGGACGACCCCGGCGGCAA CAGCCGCTGGATCGCCGGGCTCTATGTCATGACCGAGGAGGGCGAGGCCGATCTTCAGGCAGACACCGCATCCAAGACGG AGACGGACGAATGA
Upstream 100 bases:
>100_bases AATCATGGCATAAGCTGGTCTTGCGTAGGGCTTCTCCGTTGCGGCAGTCTGGACTTTCCCATAGGGGAGACTGAGGACGA TTGCCGAAGGTCTGCCGGCA
Downstream 100 bases:
>100_bases CCCCGTCGGCCATCTCGAGAAGGCAATTTCTGCTGGCCGGAATAGCGCTTCAGGTTCTAGGGCCCAAGATTGCCGCCGCG CAGCCGACGGGCACCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGFNFIAFSTVLRRLYIEVAEKEFALPNKSQTDSRISL LTGIHRKDVNRLRGQVLAASFLTTGVSQTSRILARWLADPFYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSIL DDWLDKGIVVVDQNGWIQLDLSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFERAVHYDGISPVLAARLDEI ARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEGEADLQADTASKTETDE
Sequences:
>Translated_297_residues MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGFNFIAFSTVLRRLYIEVAEKEFALPNKSQTDSRISL LTGIHRKDVNRLRGQVLAASFLTTGVSQTSRILARWLADPFYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSIL DDWLDKGIVVVDQNGWIQLDLSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFERAVHYDGISPVLAARLDEI ARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEGEADLQADTASKTETDE >Mature_297_residues MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGFNFIAFSTVLRRLYIEVAEKEFALPNKSQTDSRISL LTGIHRKDVNRLRGQVLAASFLTTGVSQTSRILARWLADPFYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSIL DDWLDKGIVVVDQNGWIQLDLSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFERAVHYDGISPVLAARLDEI ARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEGEADLQADTASKTETDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33159; Mature: 33159
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGFNFIAFSTVLRRLYIE CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAEKEFALPNKSQTDSRISLLTGIHRKDVNRLRGQVLAASFLTTGVSQTSRILARWLADP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSILDDWLDKGIVVVDQNGWIQLD EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEE LSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFERAVHYDGISPVLAARLDEI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHHHHH ARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEGEADLQADTASKTETDE HHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGFNFIAFSTVLRRLYIE CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAEKEFALPNKSQTDSRISLLTGIHRKDVNRLRGQVLAASFLTTGVSQTSRILARWLADP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSILDDWLDKGIVVVDQNGWIQLD EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEE LSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFERAVHYDGISPVLAARLDEI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHHHHH ARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEGEADLQADTASKTETDE HHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA