Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116248737

Identifier: 116248737

GI number: 116248737

Start: 60806

End: 61180

Strand: Reverse

Name: 116248737

Synonym: pRL120061

Alternate gene names: NA

Gene position: 61180-60806 (Counterclockwise)

Preceding gene: 116248738

Following gene: 116248736

Centisome position: 7.03

GC content: 59.2

Gene sequence:

>375_bases
ATGCGGGAATTCAAGCAGTTGCAAATACCGGCTCTCACGAAGGAGCCCAACACGACGTGTTCCGAAATCGTGGCGGAGGC
GGCCTTCGCGCTTGCCTCCGGCATCATCGATACGATCCCCTTCGTCGGCAGCAAACTCGACGAGCAACAGACGCGGGCAT
GGCCGCGATCGGGTGTCTTCACGGATGACGGCGTCGAGATGACCGCTACGCCCCCTGAAATATTCGAGCTTTGCGAGTTG
CTGGCAGCCCACGTCGAGAAAGGTACGTCATTCGACGTTTTCGAGGTTTTCCACAAGATTGCACGCATCGACCGGCTGAT
CGACTGGCGCCACGGCGCAGTGCTGTCACCCGAACCGCATCCCGTAACGCATTGA

Upstream 100 bases:

>100_bases
CGCTCGTCAACCAACTGCAGACGCAATTGGAAACGGCCTACACGCTCGTTTCGAAACTCCAGAGCCTGAGCCTGGTCAAC
TATCTCTGACGGATTGAAAA

Downstream 100 bases:

>100_bases
CAGAAGACGCAAAATGCTTTCCCAATGGTGGCGCGATCACGGCCGCGCCGCCAGCAATCATGGCATAAGCTGGTCTTGCG
TAGGGCTTCTCCGTTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSKLDEQQTRAWPRSGVFTDDGVEMTATPPEIFELCEL
LAAHVEKGTSFDVFEVFHKIARIDRLIDWRHGAVLSPEPHPVTH

Sequences:

>Translated_124_residues
MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSKLDEQQTRAWPRSGVFTDDGVEMTATPPEIFELCEL
LAAHVEKGTSFDVFEVFHKIARIDRLIDWRHGAVLSPEPHPVTH
>Mature_124_residues
MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSKLDEQQTRAWPRSGVFTDDGVEMTATPPEIFELCEL
LAAHVEKGTSFDVFEVFHKIARIDRLIDWRHGAVLSPEPHPVTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13814; Mature: 13814

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSKLDEQQTRAWPRSGVF
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
TDDGVEMTATPPEIFELCELLAAHVEKGTSFDVFEVFHKIARIDRLIDWRHGAVLSPEPH
CCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PVTH
CCCC
>Mature Secondary Structure
MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSKLDEQQTRAWPRSGVF
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
TDDGVEMTATPPEIFELCELLAAHVEKGTSFDVFEVFHKIARIDRLIDWRHGAVLSPEPH
CCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PVTH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA