Click here to switch to the map view.

The map label for this gene is 116248734

Identifier: 116248734

GI number: 116248734

Start: 58177

End: 58635

Strand: Reverse

Name: 116248734

Synonym: pRL120058

Alternate gene names: NA

Gene position: 58635-58177 (Counterclockwise)

Preceding gene: 116248735

Following gene: 116248732

Centisome position: 6.74

GC content: 55.12

Gene sequence:

>459_bases
TTGTTCATGCGAATTCTGCTTCGGGTGATTCCAGGGAGGGTTTGCCGATTGGCTAACGGGTCCGCCCCACACCCGCTAGC
CAATCGTTTGATTTTCAATCGTTCCGACACTGTCAAACCCATGTTCCTGAGTCATCGTAGGAATGGCCCATCCGGTAGGC
TGGATGGCGCCATCCGAACCGAACCGTCATCGCCCAAGAGGAATCAGGAATTGTTTTTGCTGGAACGCGAACCGGACATG
TCGCTGGAGATGGACGAACCGACCATCGTTGCAACCTGGGAAAACCGCGCTCAAATCATCGAAATTATGAGCAGCGCACG
CACCATGAGCCAAGAATTTCAAGATCTTTGGAACAGCAGCGGCGGAACGGGCCGGCTCAGCCAGGAAAACACGGACAGAT
TGGTCGAGCTCCTGCGCGAGATCAGCGGCCTGAACGAAAAGCTCCTGCGCTTGGCTTGA

Upstream 100 bases:

>100_bases
GGACGGCCCGCCGCCTGGGCCGCCGCCACCGGGCCCAGGCCCGGGTCCGCGCTGAAAACGCTGTCGCCGCATGTTGACAA
ATGGGAAATTTTCCCATTTA

Downstream 100 bases:

>100_bases
AAGGCCTCTCAGCTACGAGCGCCAAGCATGTTTCGGGAATTCAAAATTGCCATGGTGAAATCAGCTCAAGGCCTGTGGTC
GCAAAGTCCCCCAGGTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSHRRNGPSGRLDGAIRTEPSSPKRNQELFLLEREPDM
SLEMDEPTIVATWENRAQIIEIMSSARTMSQEFQDLWNSSGGTGRLSQENTDRLVELLREISGLNEKLLRLA

Sequences:

>Translated_152_residues
MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSHRRNGPSGRLDGAIRTEPSSPKRNQELFLLEREPDM
SLEMDEPTIVATWENRAQIIEIMSSARTMSQEFQDLWNSSGGTGRLSQENTDRLVELLREISGLNEKLLRLA
>Mature_152_residues
MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSHRRNGPSGRLDGAIRTEPSSPKRNQELFLLEREPDM
SLEMDEPTIVATWENRAQIIEIMSSARTMSQEFQDLWNSSGGTGRLSQENTDRLVELLREISGLNEKLLRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17315; Mature: 17315

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSHRRNGPSGRLDGAIRT
CHHHHHHHHHCHHHEECCCCCCCCHHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCCEEC
EPSSPKRNQELFLLEREPDMSLEMDEPTIVATWENRAQIIEIMSSARTMSQEFQDLWNSS
CCCCCCCCCEEEEEECCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGTGRLSQENTDRLVELLREISGLNEKLLRLA
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure
MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSHRRNGPSGRLDGAIRT
CHHHHHHHHHCHHHEECCCCCCCCHHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCCEEC
EPSSPKRNQELFLLEREPDMSLEMDEPTIVATWENRAQIIEIMSSARTMSQEFQDLWNSS
CCCCCCCCCEEEEEECCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGTGRLSQENTDRLVELLREISGLNEKLLRLA
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA