| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800374
Identifier: 114800374
GI number: 114800374
Start: 3597034
End: 3599718
Strand: Reverse
Name: 114800374
Synonym: HNE_3462
Alternate gene names: NA
Gene position: 3599718-3597034 (Counterclockwise)
Preceding gene: 114799974
Following gene: 114798378
Centisome position: 97.16
GC content: 67.26
Gene sequence:
>2685_bases TTGGATCACGGCGAAGGCCTGAACACGCTGGGGAAGAAGCTTGCGGCCACGCGCCGCCGGCTGACGCTTCTGGCGCTCGG CCGCGCCTGGTGGCCGGCATTTGTGTTTATTGCCTTGTTTCTGGCTGTTGCGCTCGCCGGGGGCTTTGACCGGCTGAGCA GTTTCCTGGCCGCCGCGATCCTTCCGGCGCTGATGATCACCGCATTGGGGCTGTCATGGCTCTCCTGGCGCCGGTATCGC AGCCCCAGCGAGGCGGACGTCGTGCGTGCGCTGGACCGGCAGTCTGAATTGCGGCCGGTTACGTCGCTGACCGACAGGCC GGCCGATCCTGCAGCTGGGCCGGCGAGCCTCTGGCGGGCGCACCGGGAACGGTTGATCTCCGAAATCGGGAATCTCCGTC TGCCACGCCTGAAGTCGGAATGGGCGGCGCTTGATCCCTATCGCCTGCGCTACATTGTGCCGGTGGGTGTGGTGGCACTG GCGCTGGTAGCCGGCGCCGCCGGGCCGGGGCGGATCGGCCGGGCGCTGAGCCCCGATCTGGGGGCGCTTGTCGGCGCGGA CAAAATGATCGTTGAGGCCTGGGTGACCCCGCCAGAGCATACCGGCCGGGCGCCAATCTTCCTGCAAGCGGATATGAAGA ACGTGCGGGTTCCGGTTGGCTCGGAAATCACGCTGCGCACGCAGGCGCCCTCTGCGCCCAAGCTGATCCTGCGCGGGGAC CGGCGCAAGGCCGAGCGGTTTTCCAGGACCCCTGAAGGCGCCTATGAGGCGCGCGCCCGGATTGAGGAAGATACGCGCCT GACCGTGAACTGGTGGGGCGAGCGGGCGCGGTGGAATTTCACCATTCTGCCCGATGAGGTGCCGCTCATTGCATTCGACA CGCTGCCAGAACCCGGCCAGCGCGATCAGGTGACCTTCAAGTGGAAGGCGGGCGATGATTATGGCGTGACCGCGGTCGAA CTGGCCATTCGCCTGCGGGTTCCGCATCCGGCAGCGCCCGATGCAGAGGATCGTGTGCCGGTGCCGATGCCCGGCGCGCC AGGGGCAAAGGAGCTGGCGGCGACGGCGCAGCTGGATCTGACCCGCCACCGGTGGGTGGGATTGCCGGTCGATCTCCGGC TGGTCGCGCGGGATGGGGCCGGGCAGGAGGGGTTCAGCGAGCCGGTGCCGTTCATTCTGCCGGAAAAGCTGTTTCTCGAC CCGCTGGCACGGGCTGCGCAGGAGGCGCGCGTGACCGTTCTGCGCGAACCGCGCCCTTATGCCGAGGTGCCGAAGAATGA GCAGGCAATTTCCGACGGCGCCATAAACACGGCCGCAACCGGGCGGCTTGATGCGGCGCCGGACGGTGTGCGCCAGGCCG CCCTGATGCTCGACGCTGTGACGTATCGCGGCGAGATGTTCATCAATGATCTTGGCGCCTTCATGGGTCTGCGCATGGCG CTTGGCACATTGCAATCGGCCGGGACCAAGCAGGAGGCTGATGCGGTCGAGCCGTTGCTCTGGTCGATTGCGCTGAAGCT GGAACATGGCAGCGTGGCCGATGCGCGGGCAAGGCTTGAGGCCGCGCGGGCCGCGCTGGAGCGCGCGCTGAGGGATGGCG CCTCGGAAGAGGAAATCCGCAGGCTGATGGAAGCGTTCCGCGACGCGGCAAATGAATACCTTGCGGCGAAGATGGCCGAG GCGATGGCCGGCGGGCTCGACGGGCCAGCGCAGCAGGAAGATGGCCAGGCGCAGGCGGGGGGCGACTCGCTGGGCGGTCA GGATTTTGAGGACATGTTGAATGCCCTGCAGGATCTCACCGAGACCGGGGCGGAGGAGCAGGCCCGCCAGCTTCTCTCGG ACATTACCAACATGCTGGAGAATCTCGAATTCCAGCGCGGCGAAGGCCAGGGCGATGGCCTTCCGGGTGAACAGGCCGAA GGCGAGGAAGGAGACCTTCCGCCTGAAGAGCAAGAGCTGACCGACGCCATGCGCCGGCTCTCCGAAATCCTCCGTGAACA GCGCCAGCTCAATGATGATACCCTTGCGCAGCAGCGCGGCGAACAGCCCGGTCAGATGGGTGAGCAACCCGGCGAAGGCT CAGAGCAAGGCGAAGGCGGCGACATGGAAGGCCAGGGCACGGGCGAAGGCCAGGAGCCCGGAGAAGACGGCGGCGGCGCG CAGGAAGGCGAGGGCGAGCCGGGAGAGGGTCGGGGCGGAACGCTGGCTGAGCGGCAGGCCGAGCTTGGCCGTCTCGTCGA AGAACTGGCCCGCCGGGGCGGCGACAGCGGGGGGCAGGGTGAAGAAGGCGGCGGCACCCCCGGCGACGGGGTGGACGAAG ATACCCTGCGCGGCATTCTCGATGCGCAGCGCCGGGCAGAGCGTGCCCTTGAGGGCGGCAATGAGGGGCGCGCGGTGATC GATCAGGAGCGGGCCACGCAGATGCTCTCGGAGCTTTCCCGTGAGATGGCCAACCAGATTGACCAGATGCGGGCCAACCG GCTGGGCGAGCAGGGACAAAACTCAAATGATCCGCTCGGCCGGCCGCTGACAGGCGCGGGCAATGACGGGCAGGGGATCG AAATTCCGTCAGAGTCCGAACGCCAACGGGCAAAGGATATTCTCGACGAACTCCGCCGCCGTTACGGCGAGGCCGAAGAC GAGGAAGAGCGCGAATACCTGCGGCGTCTGCTGGAGCGGTTCTGA
Upstream 100 bases:
>100_bases GTCCATTGGTTCCCGAAGTCCTCGTCAGCGGTGATCGCTACAGTATTGTGCGCCGCCGGCCGGACTTTGAAGAAATGACG ATGCTGGAAGAGGTGCCCGA
Downstream 100 bases:
>100_bases GCCGGCGCTTGCGGGGCGGGTGGCGCCGTGGTCTCATTCCGGCAAAAGTTGACCGGGAGGAAGAAAGATGGCCGCGCGCT GGGAGTATACCAAGGGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 894; Mature: 894
Protein sequence:
>894_residues MDHGEGLNTLGKKLAATRRRLTLLALGRAWWPAFVFIALFLAVALAGGFDRLSSFLAAAILPALMITALGLSWLSWRRYR SPSEADVVRALDRQSELRPVTSLTDRPADPAAGPASLWRAHRERLISEIGNLRLPRLKSEWAALDPYRLRYIVPVGVVAL ALVAGAAGPGRIGRALSPDLGALVGADKMIVEAWVTPPEHTGRAPIFLQADMKNVRVPVGSEITLRTQAPSAPKLILRGD RRKAERFSRTPEGAYEARARIEEDTRLTVNWWGERARWNFTILPDEVPLIAFDTLPEPGQRDQVTFKWKAGDDYGVTAVE LAIRLRVPHPAAPDAEDRVPVPMPGAPGAKELAATAQLDLTRHRWVGLPVDLRLVARDGAGQEGFSEPVPFILPEKLFLD PLARAAQEARVTVLREPRPYAEVPKNEQAISDGAINTAATGRLDAAPDGVRQAALMLDAVTYRGEMFINDLGAFMGLRMA LGTLQSAGTKQEADAVEPLLWSIALKLEHGSVADARARLEAARAALERALRDGASEEEIRRLMEAFRDAANEYLAAKMAE AMAGGLDGPAQQEDGQAQAGGDSLGGQDFEDMLNALQDLTETGAEEQARQLLSDITNMLENLEFQRGEGQGDGLPGEQAE GEEGDLPPEEQELTDAMRRLSEILREQRQLNDDTLAQQRGEQPGQMGEQPGEGSEQGEGGDMEGQGTGEGQEPGEDGGGA QEGEGEPGEGRGGTLAERQAELGRLVEELARRGGDSGGQGEEGGGTPGDGVDEDTLRGILDAQRRAERALEGGNEGRAVI DQERATQMLSELSREMANQIDQMRANRLGEQGQNSNDPLGRPLTGAGNDGQGIEIPSESERQRAKDILDELRRRYGEAED EEEREYLRRLLERF
Sequences:
>Translated_894_residues MDHGEGLNTLGKKLAATRRRLTLLALGRAWWPAFVFIALFLAVALAGGFDRLSSFLAAAILPALMITALGLSWLSWRRYR SPSEADVVRALDRQSELRPVTSLTDRPADPAAGPASLWRAHRERLISEIGNLRLPRLKSEWAALDPYRLRYIVPVGVVAL ALVAGAAGPGRIGRALSPDLGALVGADKMIVEAWVTPPEHTGRAPIFLQADMKNVRVPVGSEITLRTQAPSAPKLILRGD RRKAERFSRTPEGAYEARARIEEDTRLTVNWWGERARWNFTILPDEVPLIAFDTLPEPGQRDQVTFKWKAGDDYGVTAVE LAIRLRVPHPAAPDAEDRVPVPMPGAPGAKELAATAQLDLTRHRWVGLPVDLRLVARDGAGQEGFSEPVPFILPEKLFLD PLARAAQEARVTVLREPRPYAEVPKNEQAISDGAINTAATGRLDAAPDGVRQAALMLDAVTYRGEMFINDLGAFMGLRMA LGTLQSAGTKQEADAVEPLLWSIALKLEHGSVADARARLEAARAALERALRDGASEEEIRRLMEAFRDAANEYLAAKMAE AMAGGLDGPAQQEDGQAQAGGDSLGGQDFEDMLNALQDLTETGAEEQARQLLSDITNMLENLEFQRGEGQGDGLPGEQAE GEEGDLPPEEQELTDAMRRLSEILREQRQLNDDTLAQQRGEQPGQMGEQPGEGSEQGEGGDMEGQGTGEGQEPGEDGGGA QEGEGEPGEGRGGTLAERQAELGRLVEELARRGGDSGGQGEEGGGTPGDGVDEDTLRGILDAQRRAERALEGGNEGRAVI DQERATQMLSELSREMANQIDQMRANRLGEQGQNSNDPLGRPLTGAGNDGQGIEIPSESERQRAKDILDELRRRYGEAED EEEREYLRRLLERF >Mature_894_residues MDHGEGLNTLGKKLAATRRRLTLLALGRAWWPAFVFIALFLAVALAGGFDRLSSFLAAAILPALMITALGLSWLSWRRYR SPSEADVVRALDRQSELRPVTSLTDRPADPAAGPASLWRAHRERLISEIGNLRLPRLKSEWAALDPYRLRYIVPVGVVAL ALVAGAAGPGRIGRALSPDLGALVGADKMIVEAWVTPPEHTGRAPIFLQADMKNVRVPVGSEITLRTQAPSAPKLILRGD RRKAERFSRTPEGAYEARARIEEDTRLTVNWWGERARWNFTILPDEVPLIAFDTLPEPGQRDQVTFKWKAGDDYGVTAVE LAIRLRVPHPAAPDAEDRVPVPMPGAPGAKELAATAQLDLTRHRWVGLPVDLRLVARDGAGQEGFSEPVPFILPEKLFLD PLARAAQEARVTVLREPRPYAEVPKNEQAISDGAINTAATGRLDAAPDGVRQAALMLDAVTYRGEMFINDLGAFMGLRMA LGTLQSAGTKQEADAVEPLLWSIALKLEHGSVADARARLEAARAALERALRDGASEEEIRRLMEAFRDAANEYLAAKMAE AMAGGLDGPAQQEDGQAQAGGDSLGGQDFEDMLNALQDLTETGAEEQARQLLSDITNMLENLEFQRGEGQGDGLPGEQAE GEEGDLPPEEQELTDAMRRLSEILREQRQLNDDTLAQQRGEQPGQMGEQPGEGSEQGEGGDMEGQGTGEGQEPGEDGGGA QEGEGEPGEGRGGTLAERQAELGRLVEELARRGGDSGGQGEEGGGTPGDGVDEDTLRGILDAQRRAERALEGGNEGRAVI DQERATQMLSELSREMANQIDQMRANRLGEQGQNSNDPLGRPLTGAGNDGQGIEIPSESERQRAKDILDELRRRYGEAED EEEREYLRRLLERF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97057; Mature: 97057
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHGEGLNTLGKKLAATRRRLTLLALGRAWWPAFVFIALFLAVALAGGFDRLSSFLAAAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LPALMITALGLSWLSWRRYRSPSEADVVRALDRQSELRPVTSLTDRPADPAAGPASLWRA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHH HRERLISEIGNLRLPRLKSEWAALDPYRLRYIVPVGVVALALVAGAAGPGRIGRALSPDL HHHHHHHHHCCCCCCCHHHHHHCCCCHHEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCH GALVGADKMIVEAWVTPPEHTGRAPIFLQADMKNVRVPVGSEITLRTQAPSAPKLILRGD HHHHCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECC RRKAERFSRTPEGAYEARARIEEDTRLTVNWWGERARWNFTILPDEVPLIAFDTLPEPGQ HHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCC RDQVTFKWKAGDDYGVTAVELAIRLRVPHPAAPDAEDRVPVPMPGAPGAKELAATAQLDL CCCEEEEEECCCCCCHHHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TRHRWVGLPVDLRLVARDGAGQEGFSEPVPFILPEKLFLDPLARAAQEARVTVLREPRPY HHHHEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCH AEVPKNEQAISDGAINTAATGRLDAAPDGVRQAALMLDAVTYRGEMFINDLGAFMGLRMA HHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGTLQSAGTKQEADAVEPLLWSIALKLEHGSVADARARLEAARAALERALRDGASEEEIR HHHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLMEAFRDAANEYLAAKMAEAMAGGLDGPAQQEDGQAQAGGDSLGGQDFEDMLNALQDLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ETGAEEQARQLLSDITNMLENLEFQRGEGQGDGLPGEQAEGEEGDLPPEEQELTDAMRRL HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SEILREQRQLNDDTLAQQRGEQPGQMGEQPGEGSEQGEGGDMEGQGTGEGQEPGEDGGGA HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QEGEGEPGEGRGGTLAERQAELGRLVEELARRGGDSGGQGEEGGGTPGDGVDEDTLRGIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH DAQRRAERALEGGNEGRAVIDQERATQMLSELSREMANQIDQMRANRLGEQGQNSNDPLG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPLTGAGNDGQGIEIPSESERQRAKDILDELRRRYGEAEDEEEREYLRRLLERF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure MDHGEGLNTLGKKLAATRRRLTLLALGRAWWPAFVFIALFLAVALAGGFDRLSSFLAAAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LPALMITALGLSWLSWRRYRSPSEADVVRALDRQSELRPVTSLTDRPADPAAGPASLWRA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHH HRERLISEIGNLRLPRLKSEWAALDPYRLRYIVPVGVVALALVAGAAGPGRIGRALSPDL HHHHHHHHHCCCCCCCHHHHHHCCCCHHEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCH GALVGADKMIVEAWVTPPEHTGRAPIFLQADMKNVRVPVGSEITLRTQAPSAPKLILRGD HHHHCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECC RRKAERFSRTPEGAYEARARIEEDTRLTVNWWGERARWNFTILPDEVPLIAFDTLPEPGQ HHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCC RDQVTFKWKAGDDYGVTAVELAIRLRVPHPAAPDAEDRVPVPMPGAPGAKELAATAQLDL CCCEEEEEECCCCCCHHHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TRHRWVGLPVDLRLVARDGAGQEGFSEPVPFILPEKLFLDPLARAAQEARVTVLREPRPY HHHHEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCH AEVPKNEQAISDGAINTAATGRLDAAPDGVRQAALMLDAVTYRGEMFINDLGAFMGLRMA HHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGTLQSAGTKQEADAVEPLLWSIALKLEHGSVADARARLEAARAALERALRDGASEEEIR HHHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLMEAFRDAANEYLAAKMAEAMAGGLDGPAQQEDGQAQAGGDSLGGQDFEDMLNALQDLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ETGAEEQARQLLSDITNMLENLEFQRGEGQGDGLPGEQAEGEEGDLPPEEQELTDAMRRL HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SEILREQRQLNDDTLAQQRGEQPGQMGEQPGEGSEQGEGGDMEGQGTGEGQEPGEDGGGA HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QEGEGEPGEGRGGTLAERQAELGRLVEELARRGGDSGGQGEEGGGTPGDGVDEDTLRGIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH DAQRRAERALEGGNEGRAVIDQERATQMLSELSREMANQIDQMRANRLGEQGQNSNDPLG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPLTGAGNDGQGIEIPSESERQRAKDILDELRRRYGEAEDEEEREYLRRLLERF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA