| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798378
Identifier: 114798378
GI number: 114798378
Start: 3596004
End: 3596966
Strand: Reverse
Name: 114798378
Synonym: HNE_3461
Alternate gene names: NA
Gene position: 3596966-3596004 (Counterclockwise)
Preceding gene: 114800374
Following gene: 114798491
Centisome position: 97.08
GC content: 62.1
Gene sequence:
>963_bases ATGGCCGCGCGCTGGGAGTATACCAAGGGTCTCAAGGATATTGGCAATGGGCTGTATGCCTGGCTGCAGCCCGATGGCGG CTGGGGCTGGTCGAATGCCGGGCTGATCCGCGATGGGGAAGCGTCCCTTCTCGTCGATACGCTGTTCGACATGGCGCTGA CGCGGGAGATGCTCGGCGCGATGGCCGATGCGACGGGTATCGGGGCGGGCAAGATTGGCGCCATCGTGAATACGCATGCC AATGGTGATCATTGCCACGGCAATGGTTGTTGTCCGCAGGCGGAGATCATTGCGTCCGAAGCGAGCGCACGCGAAATGGC CGAAGTGCCCCCGGCGATGCTGGCCCAATTCAAGAAGATGGGCGCGCAACTGGGGCCGGCCGGCAGTTATTTCGCGGACA TTTTCGCGCCTTTCGATTTCGAGAATGTCGATGAGCGGGCGCCGACGCAGACATTTTCAGGGACGCTGGACCTGAAGGTG GGTGACAAGGCCGTGCGTCTGATCGAAGTCGGCCCGGCGCATACGGGCGGAGATGTTCTGGTGCATGTGCCGGGCGACAA GGCTATTTTCACCGGTGACATTCTGTTTATCGATGGCACGCCGCTGATGTGGGCGGGACCAGTGGCGAACTGGATCAGGG CGTGTGAGCAGATCATCGCCATGGATGTCGATGTTATCGTGCCGGGTCATGGTCCGGTCACGGACAAGGCGGGTGTGCGC CGGGTGGCGGACTATCTTGCCTTTGTTGACGGGGAGGCCCGCAAACGCTTCGATGCCGGGCTTGGCGTGCGCGAGGCGGC GCTGGATATTGCACTTGGCGACTATGCCAGCTGGGGCGACGCAGAGCGCATTGCCGTGAATGTCGACAGTCTTTACCGGG AGTATCGCGGTGACGGAAAGGTCACGCCGGTCATCGAGCTCTTTGCTTTGATGGCGGACGTGCGGGATGCGCAGCGCCGC TGA
Upstream 100 bases:
>100_bases GAATACCTGCGGCGTCTGCTGGAGCGGTTCTGAGCCGGCGCTTGCGGGGCGGGTGGCGCCGTGGTCTCATTCCGGCAAAA GTTGACCGGGAGGAAGAAAG
Downstream 100 bases:
>100_bases ATATCAGCGGTTTGCGCCGGGCACCCATTTTACGTCATCTGCGCCGTCATTGTTTGCCGCACGCCCGGCCACGAACAGCC AGTCCGACAGGCGGTTGATG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Cyclase; Beta-Lactamase; Polyketide Cyclase; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Domain Protein; Beta-Lactamase Class B; Cyclase/Dehydrase; Dehydrase; Metallo-Beta-Lactamase; Glyoxylase-Like Zinc-Dependent Hydrolase; Beta Lactamase; ActIV Cyclase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAARWEYTKGLKDIGNGLYAWLQPDGGWGWSNAGLIRDGEASLLVDTLFDMALTREMLGAMADATGIGAGKIGAIVNTHA NGDHCHGNGCCPQAEIIASEASAREMAEVPPAMLAQFKKMGAQLGPAGSYFADIFAPFDFENVDERAPTQTFSGTLDLKV GDKAVRLIEVGPAHTGGDVLVHVPGDKAIFTGDILFIDGTPLMWAGPVANWIRACEQIIAMDVDVIVPGHGPVTDKAGVR RVADYLAFVDGEARKRFDAGLGVREAALDIALGDYASWGDAERIAVNVDSLYREYRGDGKVTPVIELFALMADVRDAQRR
Sequences:
>Translated_320_residues MAARWEYTKGLKDIGNGLYAWLQPDGGWGWSNAGLIRDGEASLLVDTLFDMALTREMLGAMADATGIGAGKIGAIVNTHA NGDHCHGNGCCPQAEIIASEASAREMAEVPPAMLAQFKKMGAQLGPAGSYFADIFAPFDFENVDERAPTQTFSGTLDLKV GDKAVRLIEVGPAHTGGDVLVHVPGDKAIFTGDILFIDGTPLMWAGPVANWIRACEQIIAMDVDVIVPGHGPVTDKAGVR RVADYLAFVDGEARKRFDAGLGVREAALDIALGDYASWGDAERIAVNVDSLYREYRGDGKVTPVIELFALMADVRDAQRR >Mature_319_residues AARWEYTKGLKDIGNGLYAWLQPDGGWGWSNAGLIRDGEASLLVDTLFDMALTREMLGAMADATGIGAGKIGAIVNTHAN GDHCHGNGCCPQAEIIASEASAREMAEVPPAMLAQFKKMGAQLGPAGSYFADIFAPFDFENVDERAPTQTFSGTLDLKVG DKAVRLIEVGPAHTGGDVLVHVPGDKAIFTGDILFIDGTPLMWAGPVANWIRACEQIIAMDVDVIVPGHGPVTDKAGVRR VADYLAFVDGEARKRFDAGLGVREAALDIALGDYASWGDAERIAVNVDSLYREYRGDGKVTPVIELFALMADVRDAQRR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34194; Mature: 34063
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARWEYTKGLKDIGNGLYAWLQPDGGWGWSNAGLIRDGEASLLVDTLFDMALTREMLGA CCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH MADATGIGAGKIGAIVNTHANGDHCHGNGCCPQAEIIASEASAREMAEVPPAMLAQFKKM HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAQLGPAGSYFADIFAPFDFENVDERAPTQTFSGTLDLKVGDKAVRLIEVGPAHTGGDVL HHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEE VHVPGDKAIFTGDILFIDGTPLMWAGPVANWIRACEQIIAMDVDVIVPGHGPVTDKAGVR EEECCCCEEEECCEEEECCCCCEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHH RVADYLAFVDGEARKRFDAGLGVREAALDIALGDYASWGDAERIAVNVDSLYREYRGDGK HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCEEEEEHHHHHHHHCCCCC VTPVIELFALMADVRDAQRR CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AARWEYTKGLKDIGNGLYAWLQPDGGWGWSNAGLIRDGEASLLVDTLFDMALTREMLGA CCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH MADATGIGAGKIGAIVNTHANGDHCHGNGCCPQAEIIASEASAREMAEVPPAMLAQFKKM HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAQLGPAGSYFADIFAPFDFENVDERAPTQTFSGTLDLKVGDKAVRLIEVGPAHTGGDVL HHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEE VHVPGDKAIFTGDILFIDGTPLMWAGPVANWIRACEQIIAMDVDVIVPGHGPVTDKAGVR EEECCCCEEEECCEEEECCCCCEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHH RVADYLAFVDGEARKRFDAGLGVREAALDIALGDYASWGDAERIAVNVDSLYREYRGDGK HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCEEEEEHHHHHHHHCCCCC VTPVIELFALMADVRDAQRR CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA