Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800360

Identifier: 114800360

GI number: 114800360

Start: 2393216

End: 2393755

Strand: Reverse

Name: 114800360

Synonym: HNE_2292

Alternate gene names: NA

Gene position: 2393755-2393216 (Counterclockwise)

Preceding gene: 114799311

Following gene: 114798220

Centisome position: 64.61

GC content: 66.11

Gene sequence:

>540_bases
ATGCAGCCAGCTTTGTGGCCAAGCCGGATCGCTGGTGGTAATCTCCGGGCTATGGTCCGTTATTTTGTAATCTTTGCGGC
GACGCTCGGCATCGGCCTCGTGATGATGGCCGGTATTCTCGCGCAGAATGGCTACAGCCTGTTTGCGCCGGAAATGCGCA
TGATGCTGCTGGTCTGCGTTCTGGTGGCCGCGTATGTCGCCTGGCGCATTTCCACGGTGCTCCGGCGGCGCCAGGAAGAC
GCGTCTGATCTGCAGGCACGCGGGCAGGCGGCGCCCCGGAAAAGCCTGTTTGGCAGCCTTCTGGGCGGCAAGAGCCGCGC
TCAGCTCGACCGGGAGGCCCGGATTGCCGCGCGCCGGCGCAAGCTGATCGCTGACGGCAAGCTGGAAGCCGACGCGGCCG
ATGCCCCGGAGCCGGAGCCTGTCGCAGCGGCCCCTGAGGCTGAAAAACCGGTCCGCGTTGCGTCTTCGGCGTCGGTGAAG
GAGAAGATGGCAGCCAGGGCAGAGCGTGTGCGCCGCGCCCGCGAGGACGGCAAGATCTGA

Upstream 100 bases:

>100_bases
CCGGCCGGCCTTTCGGCGAGCGGCCTGCCGCTTGGCCTGCAAGTCATCGGCAAGGCGCTGGACGAGAGCGCGTGCTTCCG
GGTGGGCGGCGTGCTGGAAG

Downstream 100 bases:

>100_bases
TCCGCCCGGCGGCGCGCCAGTTCGCCGTCTCGACAAGCCTGCCCGGCTGCCCTTAGAAGGGCGCCACAAACCTTATAATC
CTGAGAGAAGCGATGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQPALWPSRIAGGNLRAMVRYFVIFAATLGIGLVMMAGILAQNGYSLFAPEMRMMLLVCVLVAAYVAWRISTVLRRRQED
ASDLQARGQAAPRKSLFGSLLGGKSRAQLDREARIAARRRKLIADGKLEADAADAPEPEPVAAAPEAEKPVRVASSASVK
EKMAARAERVRRAREDGKI

Sequences:

>Translated_179_residues
MQPALWPSRIAGGNLRAMVRYFVIFAATLGIGLVMMAGILAQNGYSLFAPEMRMMLLVCVLVAAYVAWRISTVLRRRQED
ASDLQARGQAAPRKSLFGSLLGGKSRAQLDREARIAARRRKLIADGKLEADAADAPEPEPVAAAPEAEKPVRVASSASVK
EKMAARAERVRRAREDGKI
>Mature_179_residues
MQPALWPSRIAGGNLRAMVRYFVIFAATLGIGLVMMAGILAQNGYSLFAPEMRMMLLVCVLVAAYVAWRISTVLRRRQED
ASDLQARGQAAPRKSLFGSLLGGKSRAQLDREARIAARRRKLIADGKLEADAADAPEPEPVAAAPEAEKPVRVASSASVK
EKMAARAERVRRAREDGKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19472; Mature: 19472

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPALWPSRIAGGNLRAMVRYFVIFAATLGIGLVMMAGILAQNGYSLFAPEMRMMLLVCV
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVAAYVAWRISTVLRRRQEDASDLQARGQAAPRKSLFGSLLGGKSRAQLDREARIAARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLIADGKLEADAADAPEPEPVAAAPEAEKPVRVASSASVKEKMAARAERVRRAREDGKI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPALWPSRIAGGNLRAMVRYFVIFAATLGIGLVMMAGILAQNGYSLFAPEMRMMLLVCV
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVAAYVAWRISTVLRRRQEDASDLQARGQAAPRKSLFGSLLGGKSRAQLDREARIAARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLIADGKLEADAADAPEPEPVAAAPEAEKPVRVASSASVKEKMAARAERVRRAREDGKI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA