Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800125

Identifier: 114800125

GI number: 114800125

Start: 2140812

End: 2141975

Strand: Reverse

Name: 114800125

Synonym: HNE_2068

Alternate gene names: NA

Gene position: 2141975-2140812 (Counterclockwise)

Preceding gene: 114797334

Following gene: 114799236

Centisome position: 57.81

GC content: 64.95

Gene sequence:

>1164_bases
ATGAGCGTCCAGAGCCTCCGCCCTCAACTGACCCAGCAGGACATCCACCGGCTGATGAAAGGCGAGTCGCCCGAGCAGCG
CGCATCGGTGGCCCACAGGCTGTGCCGCCGCATCGGTCTGGATGTCCTCAGCGACAGCGAGAAGGGCTTCGCTCGGGAGA
TCATCACGATCCTGGCGAATGACGCGGCAGACCTTGTCCGCCGCACGCTGGCCGTCACGCTCCGGTCCTCGCCCATCATC
CCGCGTGAGATCGCGCTCAAGCTCGCCCGCGACATCGAAGCCGTGGCGATCCCCATCCTGGAAGAGTCCCCCGTCTTCAC
CGAAGAAGACCTCGTCGAACTCGTCCTCTCCGTCACCGCTGCCAAGCAGGCCGCCATCGCCGGCCGCGAAGCGCTGTCGA
TCACCGTTGGTGAAGTCATCTCCGAACACGGCGCGGTCGAAGCCGTGCGCGCGCTGGCAGAAAACCAGTCCGCCGAATGG
AGCGACAAGGCTTACGGCGACGCGCTCTCCCGTTTCGGCGCAGACGAAATCGTCCAGGCCGGCCTCATCCGGCGCGATTT
CATCCCCGTCCACATCGCCGAGAAGATGGTCTCTCTCGTCTCCGGCCAGCTGTTCGACATGCTGGTCAACCGCCATGAAC
TGCCCGCCCAGCTCGCGATCGACCTCGCCGCCAGCGCCCGCGAGCGCGCTACGATCGACCTGGTCGAGCAGGCGGGCCGC
TCCCACGATCTGCCCCGCTTTGTCTCCCAGCTCAACCTGAATGGCCGCCTCACCCACTCCCTGATGATGCGCGCGCTATG
CTGCGGCCAGATGCCGTTTGTCGAGCATGCCCTGGCAGAACTTTCCGGCGTTGCCCACCAGCGCGTGTGGCTAATGATCC
ACGACGCAGGCCCGCTCGGCCTGCAAGCGGTGTTCGATCATGCCGGCCTGCCGCGCAAGATGCTGCCGGCCTTCAAGGCG
GCGGTGAATGTCTATCATGAGATTGAGCATGACGGCGGCCCGAACGACCGCGCCCGCTTCCGTGCCCGGATGATCGAACG
CGTCCTCACCCAGTTCCAGGCCATCCCCAAGGACGACCTCGACTATCTGCTCGACAAGCTCGATTTCTACTCCGAAATGG
CTGCCCGCGAAGAGGCGAGCAATAGCGGTTTCGACGCTGCTTAA

Upstream 100 bases:

>100_bases
GTTTTGGTGGGGTTCTTTCCATCCCGTCATTTTGGTAAATTCCTGTTAACCGGCTTCGCAGAGGTTGCCGTAGTTATTCT
GACGGGGAACCCACCTACCA

Downstream 100 bases:

>100_bases
GCGTCAGTGCGCGGAGCAATGGCGCCCGCAACACCGGTCTCTTCCAGAAACTCGCCATCGCGCCAGTTGGCATTGTCTGC
CACCACGAGGATGCCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPII
PREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEW
SDKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR
SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKA
AVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA

Sequences:

>Translated_387_residues
MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPII
PREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEW
SDKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR
SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKA
AVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA
>Mature_386_residues
SVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPIIP
REIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWS
DKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGRS
HDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKAA
VNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA

Specific function: Unknown

COG id: COG5330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42679; Mature: 42548

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILAN
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHC
DAADLVRRTLAVTLRSSPIIPREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHH
AKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWSDKAYGDALSRFGADEIVQA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
GLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHH
LQAVFDHAGLPRKMLPAFKAAVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DYLLDKLDFYSEMAAREEASNSGFDAA
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILAN
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHC
DAADLVRRTLAVTLRSSPIIPREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHH
AKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWSDKAYGDALSRFGADEIVQA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
GLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHH
LQAVFDHAGLPRKMLPAFKAAVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DYLLDKLDFYSEMAAREEASNSGFDAA
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA