| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799236
Identifier: 114799236
GI number: 114799236
Start: 2139217
End: 2140023
Strand: Reverse
Name: 114799236
Synonym: HNE_2066
Alternate gene names: NA
Gene position: 2140023-2139217 (Counterclockwise)
Preceding gene: 114800125
Following gene: 114799874
Centisome position: 57.76
GC content: 62.58
Gene sequence:
>807_bases ATGACCGCCCAGACCCTGCCAGAAGCCCGCCTTTCCGCAACAATTCTCCTTATGAGAGAAGGGGTTAGCGCGCCTGAAGT CCTGATGGTGAAGCGCCATTACGAGATCGACTTTGCCGCTGGCGCGCTGGTCTTTCCAGGCGGAAAAGCCAATGCGGGCG ACACAGATCCGGGCTGGGATTCGTATACGGACGGCGATTTCGGCCCCATCCAGCAGGACGCGCGCATCGCCGCCATCCGC GAGGCATACGAAGAATCCGGCATCGTCCTCGCCCGCCACCGCAAATCGCTCGGGGCAGGGGCGCCGCTCGTGGGCGCAGA CATTGCCGACAAGCTCGCCCCCCACCGCGCCGCGGTCGACCGGGGCGAAATCCCGTTCCTCGATCTCGTGCGCGAGCATG ACCTCGCCCTGGCGCTCGACCGGCTCGTCCATTTCGGCCACTGGATCACGCCGGTGATGATGCCCAAACGCTTCGACACG CACTTTTATATTGCCCGCGCCCCCAGCGGTCAGATCGCTGCCCATGATGGCCGCGAAACGACGGACGCTGTGTGGCTGTC GGCAACTGAAGCGCTGGAACAGGAAAAATCCGGCAAAGCCACCATCATCTTCCCCACACGGATGAACCTTGTGAAGCTCG CCCAGGCGCAAACCCTGTCAGATGCTGAAACACGCTTCTCCAGCCAGCCGGTGGTAACCGTCCTGCCAGAACCGGGTAAA ACCGAAACCGGCGCGCCCTGCCTCTTCATTCCCGAAGAGGCTGGCTATGGCCAGACGGTCGAGCTGCTGTCGAATGTGAA GGTTTAG
Upstream 100 bases:
>100_bases AACAGTTTCTAAGCTATTGCCTTCCCTAACGGAGCAAGCTGAACATCACGCGGAAGAGACCCGGTGAATTTGCCGGAAAT TGGACATAAAGAGGCATCAA
Downstream 100 bases:
>100_bases CCCGCCGAGGAAACTTTGAGCGCCACGCGCTTTTCCAGCGCCTCGCACACGGCGTCGGCAACCGACTCTGAGCCCTCGCC CTGAGGGCCCGCGCCAACGG
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; NUDIX Domain-Containing Protein; NUDIX Family Protein; NUDIX Family Hydrolase; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Zinc-Dependent Hydrolase; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Nudix Superfamily Hydrolase
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTAQTLPEARLSATILLMREGVSAPEVLMVKRHYEIDFAAGALVFPGGKANAGDTDPGWDSYTDGDFGPIQQDARIAAIR EAYEESGIVLARHRKSLGAGAPLVGADIADKLAPHRAAVDRGEIPFLDLVREHDLALALDRLVHFGHWITPVMMPKRFDT HFYIARAPSGQIAAHDGRETTDAVWLSATEALEQEKSGKATIIFPTRMNLVKLAQAQTLSDAETRFSSQPVVTVLPEPGK TETGAPCLFIPEEAGYGQTVELLSNVKV
Sequences:
>Translated_268_residues MTAQTLPEARLSATILLMREGVSAPEVLMVKRHYEIDFAAGALVFPGGKANAGDTDPGWDSYTDGDFGPIQQDARIAAIR EAYEESGIVLARHRKSLGAGAPLVGADIADKLAPHRAAVDRGEIPFLDLVREHDLALALDRLVHFGHWITPVMMPKRFDT HFYIARAPSGQIAAHDGRETTDAVWLSATEALEQEKSGKATIIFPTRMNLVKLAQAQTLSDAETRFSSQPVVTVLPEPGK TETGAPCLFIPEEAGYGQTVELLSNVKV >Mature_267_residues TAQTLPEARLSATILLMREGVSAPEVLMVKRHYEIDFAAGALVFPGGKANAGDTDPGWDSYTDGDFGPIQQDARIAAIRE AYEESGIVLARHRKSLGAGAPLVGADIADKLAPHRAAVDRGEIPFLDLVREHDLALALDRLVHFGHWITPVMMPKRFDTH FYIARAPSGQIAAHDGRETTDAVWLSATEALEQEKSGKATIIFPTRMNLVKLAQAQTLSDAETRFSSQPVVTVLPEPGKT ETGAPCLFIPEEAGYGQTVELLSNVKV
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29008; Mature: 28877
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQTLPEARLSATILLMREGVSAPEVLMVKRHYEIDFAAGALVFPGGKANAGDTDPGWD CCCCCCCHHHHHEEEEEEECCCCCCCEEEEEECCEEEEECCEEEECCCCCCCCCCCCCCC SYTDGDFGPIQQDARIAAIREAYEESGIVLARHRKSLGAGAPLVGADIADKLAPHRAAVD CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCHHCCCCCCEECCHHHHHHCCHHHHCC RGEIPFLDLVREHDLALALDRLVHFGHWITPVMMPKRFDTHFYIARAPSGQIAAHDGRET CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCC TDAVWLSATEALEQEKSGKATIIFPTRMNLVKLAQAQTLSDAETRFSSQPVVTVLPEPGK CHHEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCEEEECCCCCC TETGAPCLFIPEEAGYGQTVELLSNVKV CCCCCCEEEECCCCCCCHHHHHHHCCCC >Mature Secondary Structure TAQTLPEARLSATILLMREGVSAPEVLMVKRHYEIDFAAGALVFPGGKANAGDTDPGWD CCCCCCHHHHHEEEEEEECCCCCCCEEEEEECCEEEEECCEEEECCCCCCCCCCCCCCC SYTDGDFGPIQQDARIAAIREAYEESGIVLARHRKSLGAGAPLVGADIADKLAPHRAAVD CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCHHCCCCCCEECCHHHHHHCCHHHHCC RGEIPFLDLVREHDLALALDRLVHFGHWITPVMMPKRFDTHFYIARAPSGQIAAHDGRET CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCC TDAVWLSATEALEQEKSGKATIIFPTRMNLVKLAQAQTLSDAETRFSSQPVVTVLPEPGK CHHEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCEEEECCCCCC TETGAPCLFIPEEAGYGQTVELLSNVKV CCCCCCEEEECCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA