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The map label for this gene is wcaJ [C]

Identifier: 114799807

GI number: 114799807

Start: 2811811

End: 2812506

Strand: Direct

Name: wcaJ [C]

Synonym: HNE_2651

Alternate gene names: 114799807

Gene position: 2811811-2812506 (Clockwise)

Preceding gene: 114798711

Following gene: 114797300

Centisome position: 75.89

GC content: 61.64

Gene sequence:

>696_bases
ATGGAATTCCGGATCACCGACGCGACTGGTGGTGTCGAGGGTGACAACTTTGTCATCAGCGAGCCGCGCCGGCCAAACCC
GCGCAACTCTTTCACAGCAAAGCGCGCACTAGATATACTTGCAGCCTCGCTGGGCCTGATCTTCATCGCGCCGCTTCTTC
TGATCGTCGGCCTCATGGTCCGCCTTCAGGATGGCCAGGCGGCGATCTTCTCGCACACTCGCTACGGCCAGCATGGACGC
ACGTTCAAATGCTACAAGCTGCGCTCGATGGTGCCAGATGCTGCCGAACGCCTCCAGGCGCTGCTCGATACCGACCCTGC
CGCAAAACGTGAGTGGGACCTGACGCAGAAGCTGGCACGCGACCCGCGCATCACCCCGCTCGGCCGTTTCATCCGCGCCA
CCTCGATCGACGAACTCCCCCAGCTCATCAATGTGCTGAAAGGAGACATGTCGCTCGTCGGCCCGCGTCCGATCTCGCTT
TCGGAGCGTGGCAAGTATGGCGAGAATTTCGCTGACTATTGCAGCGTCCGTCCCGGCATCACCGGCCTCTGGCAGGTCAG
CGGCCGCAGCAATGTCAGCTATCCCGAGCGCGTGCGCCTGGATACGACCTATGCGCAGAGCCGTTCTTTCTGGGGCGATG
TCGTGATTATCCTGAAGACCATCCCCGCCGTGCTGAAATCTGACGGCGCCTGCTGA

Upstream 100 bases:

>100_bases
ACATGAGCTCCGCACGGCCCGGTCTAAGGGGACTAAGGCTGAAGAAAAAGTCGCGCGGTCAACAAAGTGTAATCGGCGTA
GAGTACAAAGGGGACTACCA

Downstream 100 bases:

>100_bases
TCGGCGATAATTAATCCAAAAAAGGCGGCTGGGGGGCCGCCTTTTCTTTCAAAATTCATGTACTAATGGGAACAGGCCCT
CGCAGAGCGGGCCTGTCTGA

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MEFRITDATGGVEGDNFVISEPRRPNPRNSFTAKRALDILAASLGLIFIAPLLLIVGLMVRLQDGQAAIFSHTRYGQHGR
TFKCYKLRSMVPDAAERLQALLDTDPAAKREWDLTQKLARDPRITPLGRFIRATSIDELPQLINVLKGDMSLVGPRPISL
SERGKYGENFADYCSVRPGITGLWQVSGRSNVSYPERVRLDTTYAQSRSFWGDVVIILKTIPAVLKSDGAC

Sequences:

>Translated_231_residues
MEFRITDATGGVEGDNFVISEPRRPNPRNSFTAKRALDILAASLGLIFIAPLLLIVGLMVRLQDGQAAIFSHTRYGQHGR
TFKCYKLRSMVPDAAERLQALLDTDPAAKREWDLTQKLARDPRITPLGRFIRATSIDELPQLINVLKGDMSLVGPRPISL
SERGKYGENFADYCSVRPGITGLWQVSGRSNVSYPERVRLDTTYAQSRSFWGDVVIILKTIPAVLKSDGAC
>Mature_231_residues
MEFRITDATGGVEGDNFVISEPRRPNPRNSFTAKRALDILAASLGLIFIAPLLLIVGLMVRLQDGQAAIFSHTRYGQHGR
TFKCYKLRSMVPDAAERLQALLDTDPAAKREWDLTQKLARDPRITPLGRFIRATSIDELPQLINVLKGDMSLVGPRPISL
SERGKYGENFADYCSVRPGITGLWQVSGRSNVSYPERVRLDTTYAQSRSFWGDVVIILKTIPAVLKSDGAC

Specific function: May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=196, Percent_Identity=37.7551020408163, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 25649; Mature: 25649

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFRITDATGGVEGDNFVISEPRRPNPRNSFTAKRALDILAASLGLIFIAPLLLIVGLMV
CCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQDGQAAIFSHTRYGQHGRTFKCYKLRSMVPDAAERLQALLDTDPAAKREWDLTQKLAR
HHCCCCEEEHCCCCCCCCCCEEEEHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
DPRITPLGRFIRATSIDELPQLINVLKGDMSLVGPRPISLSERGKYGENFADYCSVRPGI
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCC
TGLWQVSGRSNVSYPERVRLDTTYAQSRSFWGDVVIILKTIPAVLKSDGAC
CEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEFRITDATGGVEGDNFVISEPRRPNPRNSFTAKRALDILAASLGLIFIAPLLLIVGLMV
CCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQDGQAAIFSHTRYGQHGRTFKCYKLRSMVPDAAERLQALLDTDPAAKREWDLTQKLAR
HHCCCCEEEHCCCCCCCCCCEEEEHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
DPRITPLGRFIRATSIDELPQLINVLKGDMSLVGPRPISLSERGKYGENFADYCSVRPGI
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCC
TGLWQVSGRSNVSYPERVRLDTTYAQSRSFWGDVVIILKTIPAVLKSDGAC
CEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]