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The map label for this gene is exoF [H]

Identifier: 114798711

GI number: 114798711

Start: 2810878

End: 2811465

Strand: Direct

Name: exoF [H]

Synonym: HNE_2650

Alternate gene names: 114798711

Gene position: 2810878-2811465 (Clockwise)

Preceding gene: 114797753

Following gene: 114799807

Centisome position: 75.87

GC content: 61.56

Gene sequence:

>588_bases
ATGCTGACGCTTCGCTCGTTACTGGCCATTATGGCCCTAACTCTTGGACTGATGGTTTCGGCCTGCGGCACCAGCGGCGG
GACCGTTGGCGCGCGCGATGCGGGCGTCGCCACACAGGCCCAGGTTGATACATCCTATGCGCTCGGCTCCAGCGACCGGC
TCCGCGTTACGGTCTTCGGCCATCCGACTCTTTCGGGTGAATTCGAAGTCGATGGCAGCGGGTCGATCTCGATGCCGCTG
ATCGGACAGGTTCGCGCGCTCGGCCTCTCGACGGTCGAACTTGAGAACGCGCTCGCCGAGAGCCTCTCGGACGGCTACGT
GCTGGACCCGCGCGTCAGCGTTGAAGTCATTAACTACCGCCCGTTCTATATCCTCGGCGAAGTCGGCCGGCCGGGTGAAT
ATCCCTATACCAGCGGCCTGACAGTTCAGAACGCCGTCGCCGCGGCGGGGGGCTTCAGCTACCGCGCCAACAAGCGAGCC
GTCTTTATCAAGAGCATCGATAGCAATGAGGAAATCGCCTACGATCTGACGCCTTCGACGGTTGTAAAACCCGGCGACAC
GATCCGAATCGGCGAGCGAATCTTCTAA

Upstream 100 bases:

>100_bases
TTTTCGGTACAGATGTTGCTTTCCTTAACACCTGAAATCTAGTGAGTATGGCTCCGGGACCCCCGAGATCCTCGCAAACG
AATACAGGAGACCCTGCAGT

Downstream 100 bases:

>100_bases
TTCGCGATTCTTTGGAAACTCTACTTAAAAACGCCGCGTTCTGCGGCGTTTTTTTTTGAAACTTGCCCGGTTTTGGGACA
CTCGTTGCGTTCCATTCATG

Product: polysaccharide biosynthesis/export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLTLRSLLAIMALTLGLMVSACGTSGGTVGARDAGVATQAQVDTSYALGSSDRLRVTVFGHPTLSGEFEVDGSGSISMPL
IGQVRALGLSTVELENALAESLSDGYVLDPRVSVEVINYRPFYILGEVGRPGEYPYTSGLTVQNAVAAAGGFSYRANKRA
VFIKSIDSNEEIAYDLTPSTVVKPGDTIRIGERIF

Sequences:

>Translated_195_residues
MLTLRSLLAIMALTLGLMVSACGTSGGTVGARDAGVATQAQVDTSYALGSSDRLRVTVFGHPTLSGEFEVDGSGSISMPL
IGQVRALGLSTVELENALAESLSDGYVLDPRVSVEVINYRPFYILGEVGRPGEYPYTSGLTVQNAVAAAGGFSYRANKRA
VFIKSIDSNEEIAYDLTPSTVVKPGDTIRIGERIF
>Mature_195_residues
MLTLRSLLAIMALTLGLMVSACGTSGGTVGARDAGVATQAQVDTSYALGSSDRLRVTVFGHPTLSGEFEVDGSGSISMPL
IGQVRALGLSTVELENALAESLSDGYVLDPRVSVEVINYRPFYILGEVGRPGEYPYTSGLTVQNAVAAAGGFSYRANKRA
VFIKSIDSNEEIAYDLTPSTVVKPGDTIRIGERIF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787218, Length=173, Percent_Identity=28.9017341040462, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788376, Length=167, Percent_Identity=29.3413173652695, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20543; Mature: 20543

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLRSLLAIMALTLGLMVSACGTSGGTVGARDAGVATQAQVDTSYALGSSDRLRVTVFG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEE
HPTLSGEFEVDGSGSISMPLIGQVRALGLSTVELENALAESLSDGYVLDPRVSVEVINYR
CCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECC
PFYILGEVGRPGEYPYTSGLTVQNAVAAAGGFSYRANKRAVFIKSIDSNEEIAYDLTPST
CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCCCEEEEECCCCC
VVKPGDTIRIGERIF
EECCCCEEECCCCCC
>Mature Secondary Structure
MLTLRSLLAIMALTLGLMVSACGTSGGTVGARDAGVATQAQVDTSYALGSSDRLRVTVFG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEE
HPTLSGEFEVDGSGSISMPLIGQVRALGLSTVELENALAESLSDGYVLDPRVSVEVINYR
CCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECC
PFYILGEVGRPGEYPYTSGLTVQNAVAAAGGFSYRANKRAVFIKSIDSNEEIAYDLTPST
CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCCCEEEEECCCCC
VVKPGDTIRIGERIF
EECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]