| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is bglBB [H]
Identifier: 114797300
GI number: 114797300
Start: 2812658
End: 2813542
Strand: Direct
Name: bglBB [H]
Synonym: HNE_2652
Alternate gene names: 114797300
Gene position: 2812658-2813542 (Clockwise)
Preceding gene: 114799807
Following gene: 114798317
Centisome position: 75.91
GC content: 61.69
Gene sequence:
>885_bases ATGAGACTGGGCGCCGTGCTCGGCATCACCGCGATCGGTATTCTCGGCGCAGTGATTTTTGCCGGCCCTGTTTCAAGTTC CGAACAGGAAATCGGCGCCCCCCTGCCCGTCAGCGAAGTGCCCCAATATGAACATCCCCCGCAGATCGCTCCGGATGCGG AGGCAGGCGCCTCCTTCCTGCAGCATTTCAGCAAAGATCATGACCCGACCCGCTGGCACAAATCCAATCTGAGCTATCCG GGCGCCCACCCCGCCTGGCTGTCGCGCCAGATCCACTTCTTTGACGACCGGGTGGAGCTCGAACTGCGCCGCATGCGGGT GGGCGACAAAACACTCGCCGGCGCCGAATATCAACGCCGCGGTTTTTACTCCTTCGGCCGGTTTGAAGTGGTGATGACGC CTGCTCCCGGCTCGGGCACGGTCAGCTCCCTGTTCACCCACACCCATGCGCAGTTTGGCGACCCACATGACGAGATCGAC ATCGAGTTCCTGGGCAAGGATCTGCGCATGTTTGCGGCCAACTACTTCACCGATGGCGCGCCCCACGACACGATCCCGGT CCGCCTGCCCTTCGATGCCAGCGAGGAAATCCACCTCTATGCCTTCGAGTGGGAACCCGACGAGATCCGCTGGTTTGTGA ATGACGAGCTGGTGCATACGGCAACCGCCAAGGACCACCCCATTCCCCAATCGCCGAGCCGGATCATCATCAGCCTCTGG AGCGGCAGCCCCGCCCAGTATGACTGGCATGGCAAACCGACCTTCGAAGACGGAACGCGCGCGGCCTTCTATTGCGTCAG CTTCCAGAAAACCGGCGACACGACCCCACAATGCTCCGACACCTTCGACCCCGTTGCTGCCAATGCAGCCAAAACGGCGA ACTGA
Upstream 100 bases:
>100_bases AAATTCATGTACTAATGGGAACAGGCCCTCGCAGAGCGGGCCTGTCTGAGGGTCGGCATTGATGGGTAGTTGGGCAAAAG CCTTGAGCAGCGGGACCAGC
Downstream 100 bases:
>100_bases AGCGGGCGCTGCCTCGGGCACGGCAGGATTTGCCGCGCCTGCGCGCCGTAACGGCGCCCAATCCCGTGTGACACGCCATG ACGGGCAGTGATCTCGGCCT
Product: putative licheninase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRLGAVLGITAIGILGAVIFAGPVSSSEQEIGAPLPVSEVPQYEHPPQIAPDAEAGASFLQHFSKDHDPTRWHKSNLSYP GAHPAWLSRQIHFFDDRVELELRRMRVGDKTLAGAEYQRRGFYSFGRFEVVMTPAPGSGTVSSLFTHTHAQFGDPHDEID IEFLGKDLRMFAANYFTDGAPHDTIPVRLPFDASEEIHLYAFEWEPDEIRWFVNDELVHTATAKDHPIPQSPSRIIISLW SGSPAQYDWHGKPTFEDGTRAAFYCVSFQKTGDTTPQCSDTFDPVAANAAKTAN
Sequences:
>Translated_294_residues MRLGAVLGITAIGILGAVIFAGPVSSSEQEIGAPLPVSEVPQYEHPPQIAPDAEAGASFLQHFSKDHDPTRWHKSNLSYP GAHPAWLSRQIHFFDDRVELELRRMRVGDKTLAGAEYQRRGFYSFGRFEVVMTPAPGSGTVSSLFTHTHAQFGDPHDEID IEFLGKDLRMFAANYFTDGAPHDTIPVRLPFDASEEIHLYAFEWEPDEIRWFVNDELVHTATAKDHPIPQSPSRIIISLW SGSPAQYDWHGKPTFEDGTRAAFYCVSFQKTGDTTPQCSDTFDPVAANAAKTAN >Mature_294_residues MRLGAVLGITAIGILGAVIFAGPVSSSEQEIGAPLPVSEVPQYEHPPQIAPDAEAGASFLQHFSKDHDPTRWHKSNLSYP GAHPAWLSRQIHFFDDRVELELRRMRVGDKTLAGAEYQRRGFYSFGRFEVVMTPAPGSGTVSSLFTHTHAQFGDPHDEID IEFLGKDLRMFAANYFTDGAPHDTIPVRLPFDASEEIHLYAFEWEPDEIRWFVNDELVHTATAKDHPIPQSPSRIIISLW SGSPAQYDWHGKPTFEDGTRAAFYCVSFQKTGDTTPQCSDTFDPVAANAAKTAN
Specific function: Hydrolyzes B-glucans containing mixed beta-1,3 and beta- 1,4 linkages [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321628, Length=147, Percent_Identity=29.2517006802721, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323242, Length=157, Percent_Identity=33.1210191082803, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008264 - InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 32656; Mature: 32656
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGAVLGITAIGILGAVIFAGPVSSSEQEIGAPLPVSEVPQYEHPPQIAPDAEAGASFL CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH QHFSKDHDPTRWHKSNLSYPGAHPAWLSRQIHFFDDRVELELRRMRVGDKTLAGAEYQRR HHHHCCCCCCHHHHCCCCCCCCCHHHHCCEEEEECCHHHHEEEHHHCCCHHHCCCHHHHC GFYSFGRFEVVMTPAPGSGTVSSLFTHTHAQFGDPHDEIDIEFLGKDLRMFAANYFTDGA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEHEECCHHHHHHHHHHCCCCC PHDTIPVRLPFDASEEIHLYAFEWEPDEIRWFVNDELVHTATAKDHPIPQSPSRIIISLW CCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEE SGSPAQYDWHGKPTFEDGTRAAFYCVSFQKTGDTTPQCSDTFDPVAANAAKTAN CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MRLGAVLGITAIGILGAVIFAGPVSSSEQEIGAPLPVSEVPQYEHPPQIAPDAEAGASFL CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH QHFSKDHDPTRWHKSNLSYPGAHPAWLSRQIHFFDDRVELELRRMRVGDKTLAGAEYQRR HHHHCCCCCCHHHHCCCCCCCCCHHHHCCEEEEECCHHHHEEEHHHCCCHHHCCCHHHHC GFYSFGRFEVVMTPAPGSGTVSSLFTHTHAQFGDPHDEIDIEFLGKDLRMFAANYFTDGA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEHEECCHHHHHHHHHHCCCCC PHDTIPVRLPFDASEEIHLYAFEWEPDEIRWFVNDELVHTATAKDHPIPQSPSRIIISLW CCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEE SGSPAQYDWHGKPTFEDGTRAAFYCVSFQKTGDTTPQCSDTFDPVAANAAKTAN CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7763386 [H]