| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is mntH [H]
Identifier: 114799474
GI number: 114799474
Start: 2208621
End: 2209835
Strand: Reverse
Name: mntH [H]
Synonym: HNE_2126
Alternate gene names: 114799474
Gene position: 2209835-2208621 (Counterclockwise)
Preceding gene: 114800249
Following gene: 114797321
Centisome position: 59.64
GC content: 66.83
Gene sequence:
>1215_bases ATGACGCGCAAATTCTCCATTGGTCCGGGCGCGCTGGTTGCTGCCGCCTTCATTGGTCCGGGTACGGTGACGGCCTGCAC GCTTGCCGGGGCCAATTTCGGCTTTGCCCTCGTCTGGGCGCTGGTCTTTGCCACATTCGCGACAATCATCCTGCAGGAGA TGACCGTGCGTCTGGGCATCCTTGGGGGCGCGGGGCTGGGGGAGGCGCTGGTCGCGCCGGGTACGCCGGCGGCGCTCAAA TGGGGCGCCATCGTGCTGGTACTGGCCGCGCTGGCGCTGGGCAACGCTGCCTATGAGGCCGGCAACATCACGGGGGGAGC CCTCGGCATGCGCGCCATCCTGGGGGAAGGAGAGGGCATTCAGCGCATCACGGCGCTCGCAACGGGCCTCCTCGCGGCGC TGATTTTGCTGCTCGGGCGGTACAAGACCCTTGAGCGCGTCCTGATCGGTCTCGTCCTCCTGATGAGCCTCGCCTTTGCC GCCAGTCTCGTGCTCGTAAGGCCCGACATCGGCTCCATGATCGGCGGCCTGCGCCCCACGCTGCCCGATGGCAGCCTGCT GACGGCCATGGCGCTGATCGGGACAACCATCGTGCCGTATAATCTGTTTCTCCATGCGGCGGCTGTCCGCGAACGCTGGA AGGAAAACACAGAAGCCGGCCTCAACGCCGCCATCGCCGACACGCGCGTGTCGGTTGGCCTTGGCGGCCTGATTTCCATC CTTGTGCTGAGCACGGCAGCCGCCAGCCTCTTTGGCGCAGGCATGGTGATCTCCAGCGGGGCGGACATGGCCTCGGCGCT GGAACCTGCCTATGGGTCTGCGGCGCGCATCCTGGCGGGCGCCGGGCTTTGCGCGGCGGGGCTCTCCTCCGCGATCACCG CGCCGCTGGCAACGGCGTATGCCGTATGTGAAGTGACGGGCCGGCCCAAGTCGGGCTGGTTCTTCAAGGGCATTGCGCTC GCCATCGTGTTCATCGGCCTGAGCGTGGCGCTGCTGGGTATCCGGCCGGTGGAGCTGATCCTGATTGCGCAGGTCGCCAA CGGCCTCCTGCTGCCCGTCGTGGCTGCCTTTCTGCTCATCACCATGAACCGAAAATCGGTACTCGGCAGCCATACCAACG GGCCGGTGCGCAACGCGCTCGGCGTCCTTGTTGTTCTGGTCGCAGCGTTCCTCGGGCTCCGCCTCATCCTGCGCGCGCTG GGCATCTGGCCATGA
Upstream 100 bases:
>100_bases AAACCGGCGTCGCCTCGGTCAGTGAAGAGCATTATGCCGGCAGCCACTGGCTCGCCAGCTTCGCCACCTATCTGGAAACC CGCCGGGGCCTCTCCGCCGA
Downstream 100 bases:
>100_bases CGCGCAGCATCTGCCTCAATGCAGATATCGGCGAGCTTCCCGGCGAAGCGGGCAGGGCGCTCGACCATGCGATCCTGGAT GTTGTTTCCCGGTGCAGCAT
Product: Mn2+/Fe2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTRKFSIGPGALVAAAFIGPGTVTACTLAGANFGFALVWALVFATFATIILQEMTVRLGILGGAGLGEALVAPGTPAALK WGAIVLVLAALALGNAAYEAGNITGGALGMRAILGEGEGIQRITALATGLLAALILLLGRYKTLERVLIGLVLLMSLAFA ASLVLVRPDIGSMIGGLRPTLPDGSLLTAMALIGTTIVPYNLFLHAAAVRERWKENTEAGLNAAIADTRVSVGLGGLISI LVLSTAAASLFGAGMVISSGADMASALEPAYGSAARILAGAGLCAAGLSSAITAPLATAYAVCEVTGRPKSGWFFKGIAL AIVFIGLSVALLGIRPVELILIAQVANGLLLPVVAAFLLITMNRKSVLGSHTNGPVRNALGVLVVLVAAFLGLRLILRAL GIWP
Sequences:
>Translated_404_residues MTRKFSIGPGALVAAAFIGPGTVTACTLAGANFGFALVWALVFATFATIILQEMTVRLGILGGAGLGEALVAPGTPAALK WGAIVLVLAALALGNAAYEAGNITGGALGMRAILGEGEGIQRITALATGLLAALILLLGRYKTLERVLIGLVLLMSLAFA ASLVLVRPDIGSMIGGLRPTLPDGSLLTAMALIGTTIVPYNLFLHAAAVRERWKENTEAGLNAAIADTRVSVGLGGLISI LVLSTAAASLFGAGMVISSGADMASALEPAYGSAARILAGAGLCAAGLSSAITAPLATAYAVCEVTGRPKSGWFFKGIAL AIVFIGLSVALLGIRPVELILIAQVANGLLLPVVAAFLLITMNRKSVLGSHTNGPVRNALGVLVVLVAAFLGLRLILRAL GIWP >Mature_403_residues TRKFSIGPGALVAAAFIGPGTVTACTLAGANFGFALVWALVFATFATIILQEMTVRLGILGGAGLGEALVAPGTPAALKW GAIVLVLAALALGNAAYEAGNITGGALGMRAILGEGEGIQRITALATGLLAALILLLGRYKTLERVLIGLVLLMSLAFAA SLVLVRPDIGSMIGGLRPTLPDGSLLTAMALIGTTIVPYNLFLHAAAVRERWKENTEAGLNAAIADTRVSVGLGGLISIL VLSTAAASLFGAGMVISSGADMASALEPAYGSAARILAGAGLCAAGLSSAITAPLATAYAVCEVTGRPKSGWFFKGIALA IVFIGLSVALLGIRPVELILIAQVANGLLLPVVAAFLLITMNRKSVLGSHTNGPVRNALGVLVVLVAAFLGLRLILRALG IWP
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI109255241, Length=213, Percent_Identity=32.3943661971831, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1788736, Length=393, Percent_Identity=27.735368956743, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71993856, Length=213, Percent_Identity=28.169014084507, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193210616, Length=331, Percent_Identity=25.6797583081571, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17569473, Length=291, Percent_Identity=24.3986254295533, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71999499, Length=265, Percent_Identity=27.1698113207547, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24648607, Length=346, Percent_Identity=23.121387283237, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362176, Length=346, Percent_Identity=23.121387283237, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24648609, Length=346, Percent_Identity=23.121387283237, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45553443, Length=346, Percent_Identity=23.4104046242775, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 40816; Mature: 40685
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKFSIGPGALVAAAFIGPGTVTACTLAGANFGFALVWALVFATFATIILQEMTVRLGI CCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE LGGAGLGEALVAPGTPAALKWGAIVLVLAALALGNAAYEAGNITGGALGMRAILGEGEGI ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCH QRITALATGLLAALILLLGRYKTLERVLIGLVLLMSLAFAASLVLVRPDIGSMIGGLRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCC LPDGSLLTAMALIGTTIVPYNLFLHAAAVRERWKENTEAGLNAAIADTRVSVGLGGLISI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH LVLSTAAASLFGAGMVISSGADMASALEPAYGSAARILAGAGLCAAGLSSAITAPLATAY HHHHHHHHHHHHCCHHEECCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AVCEVTGRPKSGWFFKGIALAIVFIGLSVALLGIRPVELILIAQVANGLLLPVVAAFLLI HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH TMNRKSVLGSHTNGPVRNALGVLVVLVAAFLGLRLILRALGIWP HCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TRKFSIGPGALVAAAFIGPGTVTACTLAGANFGFALVWALVFATFATIILQEMTVRLGI CCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE LGGAGLGEALVAPGTPAALKWGAIVLVLAALALGNAAYEAGNITGGALGMRAILGEGEGI ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCH QRITALATGLLAALILLLGRYKTLERVLIGLVLLMSLAFAASLVLVRPDIGSMIGGLRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCC LPDGSLLTAMALIGTTIVPYNLFLHAAAVRERWKENTEAGLNAAIADTRVSVGLGGLISI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH LVLSTAAASLFGAGMVISSGADMASALEPAYGSAARILAGAGLCAAGLSSAITAPLATAY HHHHHHHHHHHHCCHHEECCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AVCEVTGRPKSGWFFKGIALAIVFIGLSVALLGIRPVELILIAQVANGLLLPVVAAFLLI HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH TMNRKSVLGSHTNGPVRNALGVLVVLVAAFLGLRLILRALGIWP HCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]