| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800249
Identifier: 114800249
GI number: 114800249
Start: 2209832
End: 2210842
Strand: Reverse
Name: 114800249
Synonym: HNE_2127
Alternate gene names: NA
Gene position: 2210842-2209832 (Counterclockwise)
Preceding gene: 114799669
Following gene: 114799474
Centisome position: 59.67
GC content: 65.18
Gene sequence:
>1011_bases GTGACAGACCGTTTTGCGCGGCTCGCGCTTTCCTGCGTTCACAAGGACTATCCCAACAAGATCAGCCACGTGTTGAATTC CGCCGCCGATGCCGCCACGCCGCGCGAGCTGTATCCGGCTTTCTATGGCTGCTTTGACTGGCACTCTTCGGTGCACGGGC ACTGGCTGCTTGTGCGTATCCTGAACACTGATCCGGAAACGCCCTACGCAGACGCCATCAAGACGGCCCTCGCGCAAAGC TTCTCGGAGGAGAATATCGCGGGCGAGGTCGCCTATTTTCAGGCGCCGGACAGGGCGTCGTTCGAGCGCCCCTATGGCAC CGCCTGGTTCCTGCAACTGATGACCGAGCTGCGCGAGGCAGACTTTCCCGAGGCGGCCGAATGGGCGGGCACGCTGGCGC CTCTGGAAACCCTGATCGCCGACTATACCAGCGCCTGGCTGCCAAAGCTCGTCTACCCCATCCGCGCGGGCACGCACAAC CAGACAGCCTTTGCCTTCGGCCTGATGATCGACTGGGCCGACGCGACCGGCAACACGGCCTTCCGTGAACAGATCGCTGC CAAGTCGCGGGAGTTCTACAGCGGGGACGTCTCCTGCCCGCTCGGCTACGAACCCTCGGGCGAAGACTTTCTCTCGCCCT GCCTGATGGAGGCAGACCTGATGCGCCGCGTGATGGACCGGGAAGCGTTTGCCGCCTGGCTGACCGCCTTCCTGCCGCTG ATCCCGCAGGATGGGAATGGCGACTGGCTCGCGCCGGGCGTCGTGCTCGATCCCTCTGATGGCAAGCTGGTTCACCTCGA TGGTCTGAACCTGTCCCGCGCCTGGGCGCTCGAAGGCATCGCCTCTGCCTTGCCGGAGGCCGATCCGCGCCGGCCGGCAC TGCTCGCCTCGGCCGCCCTGCACAAGGAAACCGGCGTCGCCTCGGTCAGTGAAGAGCATTATGCCGGCAGCCACTGGCTC GCCAGCTTCGCCACCTATCTGGAAACCCGCCGGGGCCTCTCCGCCGAATGA
Upstream 100 bases:
>100_bases GCCCGCAAACGACGCACCCGCCGCAGAGGTCCCGCCTGCAGCAGAGGCCGGGGCGCATGCCGATCCGCTTGCAGACCTGC CACCGCCACGCGAGGGCGTC
Downstream 100 bases:
>100_bases CGCGCAAATTCTCCATTGGTCCGGGCGCGCTGGTTGCTGCCGCCTTCATTGGTCCGGGTACGGTGACGGCCTGCACGCTT GCCGGGGCCAATTTCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTDRFARLALSCVHKDYPNKISHVLNSAADAATPRELYPAFYGCFDWHSSVHGHWLLVRILNTDPETPYADAIKTALAQS FSEENIAGEVAYFQAPDRASFERPYGTAWFLQLMTELREADFPEAAEWAGTLAPLETLIADYTSAWLPKLVYPIRAGTHN QTAFAFGLMIDWADATGNTAFREQIAAKSREFYSGDVSCPLGYEPSGEDFLSPCLMEADLMRRVMDREAFAAWLTAFLPL IPQDGNGDWLAPGVVLDPSDGKLVHLDGLNLSRAWALEGIASALPEADPRRPALLASAALHKETGVASVSEEHYAGSHWL ASFATYLETRRGLSAE
Sequences:
>Translated_336_residues MTDRFARLALSCVHKDYPNKISHVLNSAADAATPRELYPAFYGCFDWHSSVHGHWLLVRILNTDPETPYADAIKTALAQS FSEENIAGEVAYFQAPDRASFERPYGTAWFLQLMTELREADFPEAAEWAGTLAPLETLIADYTSAWLPKLVYPIRAGTHN QTAFAFGLMIDWADATGNTAFREQIAAKSREFYSGDVSCPLGYEPSGEDFLSPCLMEADLMRRVMDREAFAAWLTAFLPL IPQDGNGDWLAPGVVLDPSDGKLVHLDGLNLSRAWALEGIASALPEADPRRPALLASAALHKETGVASVSEEHYAGSHWL ASFATYLETRRGLSAE >Mature_335_residues TDRFARLALSCVHKDYPNKISHVLNSAADAATPRELYPAFYGCFDWHSSVHGHWLLVRILNTDPETPYADAIKTALAQSF SEENIAGEVAYFQAPDRASFERPYGTAWFLQLMTELREADFPEAAEWAGTLAPLETLIADYTSAWLPKLVYPIRAGTHNQ TAFAFGLMIDWADATGNTAFREQIAAKSREFYSGDVSCPLGYEPSGEDFLSPCLMEADLMRRVMDREAFAAWLTAFLPLI PQDGNGDWLAPGVVLDPSDGKLVHLDGLNLSRAWALEGIASALPEADPRRPALLASAALHKETGVASVSEEHYAGSHWLA SFATYLETRRGLSAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37019; Mature: 36888
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRFARLALSCVHKDYPNKISHVLNSAADAATPRELYPAFYGCFDWHSSVHGHWLLVRI CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE LNTDPETPYADAIKTALAQSFSEENIAGEVAYFQAPDRASFERPYGTAWFLQLMTELREA ECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC DFPEAAEWAGTLAPLETLIADYTSAWLPKLVYPIRAGTHNQTAFAFGLMIDWADATGNTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHH FREQIAAKSREFYSGDVSCPLGYEPSGEDFLSPCLMEADLMRRVMDREAFAAWLTAFLPL HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPQDGNGDWLAPGVVLDPSDGKLVHLDGLNLSRAWALEGIASALPEADPRRPALLASAAL CCCCCCCCEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HKETGVASVSEEHYAGSHWLASFATYLETRRGLSAE HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDRFARLALSCVHKDYPNKISHVLNSAADAATPRELYPAFYGCFDWHSSVHGHWLLVRI CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE LNTDPETPYADAIKTALAQSFSEENIAGEVAYFQAPDRASFERPYGTAWFLQLMTELREA ECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC DFPEAAEWAGTLAPLETLIADYTSAWLPKLVYPIRAGTHNQTAFAFGLMIDWADATGNTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHH FREQIAAKSREFYSGDVSCPLGYEPSGEDFLSPCLMEADLMRRVMDREAFAAWLTAFLPL HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPQDGNGDWLAPGVVLDPSDGKLVHLDGLNLSRAWALEGIASALPEADPRRPALLASAAL CCCCCCCCEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HKETGVASVSEEHYAGSHWLASFATYLETRRGLSAE HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA