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The map label for this gene is ybgL [C]

Identifier: 114797321

GI number: 114797321

Start: 2207872

End: 2208624

Strand: Reverse

Name: ybgL [C]

Synonym: HNE_2125

Alternate gene names: 114797321

Gene position: 2208624-2207872 (Counterclockwise)

Preceding gene: 114799474

Following gene: 114800075

Centisome position: 59.61

GC content: 66.67

Gene sequence:

>753_bases
ATGACGCGCAGCATCTGCCTCAATGCAGATATCGGCGAGCTTCCCGGCGAAGCGGGCAGGGCGCTCGACCATGCGATCCT
GGATGTTGTTTCCCGGTGCAGCATCGCGTGCGGTGGCCATGCGGGCGATGCCGAGTCGATGGCAGAGACGCTGCGGATGG
CGAAGGCGCGCGGCGTGCTGGCGGGCGCCCACCCCTCCTATGCGGACCGGGAAGGGTTCGGCCGTTCCCGGAACAATGTT
TCTCTGCCGCAGCTGGCATTGTCCTTGAAGGAGCAGGTCGCCAGCCTGCTCGCCATCGCGGCGGCCACCGATACCCAGGT
CCGCCATATCAAACCCCATGGCACGCTCTACAATGATGCCGCCCGCGACGGTGAGCTTGCCACCCTCACGGCAGCGCTCT
GTGTTGACGCCGGGATCAACACTCTGCTCGGCCCGCCGGCCTCCGAACTGGAGCGCGCCGCCCAAGCTGCCGGCCTCACC
TATGTCACCGAAGGCTTTGCCGACCGCGCGTATGAACCAGACCTCAGCCTGACACCGCGCGCGTTGCCCGGCGCCGTTCT
GGAAGACCCCGCCGCCCAGAGCGCGCAAGCTCTGAGCATGGCCCTCGACCAGCAGGTCAGGGTGCGCACCGGGACCTTTA
TTCCTATCCGTGTTCAAACAATCTGCCTGCATGGCGATACACCCGGCGCGGCCCGGAGCGCGGCGCTCCTGCGGGCCGCG
CTGGAGCAGCAAGGAATTACCATCCACCCATGA

Upstream 100 bases:

>100_bases
ATACCAACGGGCCGGTGCGCAACGCGCTCGGCGTCCTTGTTGTTCTGGTCGCAGCGTTCCTCGGGCTCCGCCTCATCCTG
CGCGCGCTGGGCATCTGGCC

Downstream 100 bases:

>100_bases
GCCTGTGCGAGATTTTTCCTGTGGGGGATGATGCAATCGCGGTGAAGGCGGCCGATCGCGCCGCGCGTCATGCGCTGGCG
GCAACCCTTCGCGCGTCCGG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRSICLNADIGELPGEAGRALDHAILDVVSRCSIACGGHAGDAESMAETLRMAKARGVLAGAHPSYADREGFGRSRNNV
SLPQLALSLKEQVASLLAIAAATDTQVRHIKPHGTLYNDAARDGELATLTAALCVDAGINTLLGPPASELERAAQAAGLT
YVTEGFADRAYEPDLSLTPRALPGAVLEDPAAQSAQALSMALDQQVRVRTGTFIPIRVQTICLHGDTPGAARSAALLRAA
LEQQGITIHP

Sequences:

>Translated_250_residues
MTRSICLNADIGELPGEAGRALDHAILDVVSRCSIACGGHAGDAESMAETLRMAKARGVLAGAHPSYADREGFGRSRNNV
SLPQLALSLKEQVASLLAIAAATDTQVRHIKPHGTLYNDAARDGELATLTAALCVDAGINTLLGPPASELERAAQAAGLT
YVTEGFADRAYEPDLSLTPRALPGAVLEDPAAQSAQALSMALDQQVRVRTGTFIPIRVQTICLHGDTPGAARSAALLRAA
LEQQGITIHP
>Mature_249_residues
TRSICLNADIGELPGEAGRALDHAILDVVSRCSIACGGHAGDAESMAETLRMAKARGVLAGAHPSYADREGFGRSRNNVS
LPQLALSLKEQVASLLAIAAATDTQVRHIKPHGTLYNDAARDGELATLTAALCVDAGINTLLGPPASELERAAQAAGLTY
VTEGFADRAYEPDLSLTPRALPGAVLEDPAAQSAQALSMALDQQVRVRTGTFIPIRVQTICLHGDTPGAARSAALLRAAL
EQQGITIHP

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=247, Percent_Identity=42.1052631578947, Blast_Score=165, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26017; Mature: 25886

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSICLNADIGELPGEAGRALDHAILDVVSRCSIACGGHAGDAESMAETLRMAKARGVL
CCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCE
AGAHPSYADREGFGRSRNNVSLPQLALSLKEQVASLLAIAAATDTQVRHIKPHGTLYNDA
ECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
ARDGELATLTAALCVDAGINTLLGPPASELERAAQAAGLTYVTEGFADRAYEPDLSLTPR
CCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
ALPGAVLEDPAAQSAQALSMALDQQVRVRTGTFIPIRVQTICLHGDTPGAARSAALLRAA
CCCCHHHCCCHHHHHHHHHHHHHHHHHECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
LEQQGITIHP
HHHCCCEECC
>Mature Secondary Structure 
TRSICLNADIGELPGEAGRALDHAILDVVSRCSIACGGHAGDAESMAETLRMAKARGVL
CCCEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCE
AGAHPSYADREGFGRSRNNVSLPQLALSLKEQVASLLAIAAATDTQVRHIKPHGTLYNDA
ECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
ARDGELATLTAALCVDAGINTLLGPPASELERAAQAAGLTYVTEGFADRAYEPDLSLTPR
CCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
ALPGAVLEDPAAQSAQALSMALDQQVRVRTGTFIPIRVQTICLHGDTPGAARSAALLRAA
CCCCHHHCCCHHHHHHHHHHHHHHHHHECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
LEQQGITIHP
HHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA