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The map label for this gene is ybdA [C]

Identifier: 114799230

GI number: 114799230

Start: 1278835

End: 1280097

Strand: Reverse

Name: ybdA [C]

Synonym: HNE_1254

Alternate gene names: 114799230

Gene position: 1280097-1278835 (Counterclockwise)

Preceding gene: 114798613

Following gene: 114800339

Centisome position: 34.55

GC content: 67.7

Gene sequence:

>1263_bases
ATGACCCCGCCTGAGAAAGCCGGAGCGCCGCATCTCACGGGCACTGCCGCGCTCGTCCGCGTCATGGCGGATACAGCCTA
CCGCAATCTCTTCCTCGCCTCCACCGCCGTCATGGCCAGCCAGTGGATGCAGCGCATCGCGCTCGGCTGGATCATGTGGG
AGCTTACTGGCTCCACCACATGGCTCGGCCTGCTGGCCAGCGCAGAGCTCCTCCCCGGCCTCTTCTTCGGCCCGCTCGGC
GGCGTCCTCGCCGACAGGATGAGCCGTAAGCGGATGGTCCTCATCTGCCAGATTGCGGCCTTTGTCATCTCCGTCGCCAC
CGGCATAGTCGTTTTCCTCGGCCTCTCGACGCCGCTCCTCCTGATGGTGCTGACAGCTGGGGGCGGCATTGCCGCGGCGC
TCCAGGAATCGGCCCGCACCCTGCTGCTGCGCGACGCCACCCCGCGCGACTGCCTGCCCACCGGCATGTCGATGACCGCG
ATCTCGGTCAACGTCACCCGCTTCCTCGGCCCGGCGCTCGCCGGTCCGCTGGTCATCTGGCCCGGTCCCGCTTCGATCTT
CTGGATCAATGCCGCCGTCGCCCTGGTCATGATCGCCACCGTGCTCACCCTGCGCCTCAAACACGCCACCCCGGCACCGG
CCACCCGCGAACCCTTCCTGCGCCAGCTCTGGATCGGCATGAAAGGCGCCTCCAGCCATCCGGTTGTCACACCGGTCCTC
CTGGTTTTTGCCGCCACCGCCTTCCTCGTCCGCCCGGTTTACGAGCTGATGCCCGCCTTCGCCGACCGTCTCTTCGGCGG
CAATGTTCAGGACTATACCTATCTCATCATGGGCGTCGGTGCAGGCGCGGTCATCGGCGCCGTCATCGTCACGCTGAACG
CGCCCCCGCGCCCGGCCATGATGTTTTTCTGGTCGTCGCTCGCCGCCTGCCTTTCCCTGGTCGCCTTCTCCGCGACACCG
GGCATTTTATCGGCCACACTGGCGGCAACGATCCTGGGCTTTTTCATGTGCATCAGCGCCGCCACATCTCAGCTCGTCAT
GGTTCTGGATACGGAGGAATCCGTAACCGGCCGGGTGCTCAGCCTCTGGGGCGCGCTCATGCGCGGCGCGCCGGCGCTGG
GCGCGCTGGCTACCGGCGCCGTGCTGGACCTGATGGGATACCGCCTGCCGCTGGCCCTCTCCGGCCTTATCGCGGCGGTG
CTCACAGGCGGCGCGATCTACCTCTTCACCCGCAGTCCGGGCGCCCGCCCGGACGCTGCCTGA

Upstream 100 bases:

>100_bases
TGCTTCGCCTCGGATCGGACAACGCCGCCACGCCGCTGGCGTATCATCGCGGCAATATCTGGTGTCTTCCGGCCCGCGAG
ATTGTCCCTGAAGGGCGTTC

Downstream 100 bases:

>100_bases
GCAAGGACCGCCATGCCCTCCCAATGGTCAATTGATAGGCACCGAACCGCAAAGCTGATGCAGTTTCTGACATTTTGTCT
GAAATGTCAGATTTTGCGAT

Product: major facilitator family protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Transporter Facilitator Family; Permease; Facilitator Superfamily Transporter; MFS Permease; Facilitator Family Protein; MFS Family Transporter Protein; Mfs Transporter; Arabinose Efflux Permease Family Protein; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Transmembrane Efflux Protein; Multidrug ABC Transporter; Transporter-Like Membrane Protein; Macrolide-Efflux Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; MFS Family Transporter; Transport Transmembrane Protein

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTPPEKAGAPHLTGTAALVRVMADTAYRNLFLASTAVMASQWMQRIALGWIMWELTGSTTWLGLLASAELLPGLFFGPLG
GVLADRMSRKRMVLICQIAAFVISVATGIVVFLGLSTPLLLMVLTAGGGIAAALQESARTLLLRDATPRDCLPTGMSMTA
ISVNVTRFLGPALAGPLVIWPGPASIFWINAAVALVMIATVLTLRLKHATPAPATREPFLRQLWIGMKGASSHPVVTPVL
LVFAATAFLVRPVYELMPAFADRLFGGNVQDYTYLIMGVGAGAVIGAVIVTLNAPPRPAMMFFWSSLAACLSLVAFSATP
GILSATLAATILGFFMCISAATSQLVMVLDTEESVTGRVLSLWGALMRGAPALGALATGAVLDLMGYRLPLALSGLIAAV
LTGGAIYLFTRSPGARPDAA

Sequences:

>Translated_420_residues
MTPPEKAGAPHLTGTAALVRVMADTAYRNLFLASTAVMASQWMQRIALGWIMWELTGSTTWLGLLASAELLPGLFFGPLG
GVLADRMSRKRMVLICQIAAFVISVATGIVVFLGLSTPLLLMVLTAGGGIAAALQESARTLLLRDATPRDCLPTGMSMTA
ISVNVTRFLGPALAGPLVIWPGPASIFWINAAVALVMIATVLTLRLKHATPAPATREPFLRQLWIGMKGASSHPVVTPVL
LVFAATAFLVRPVYELMPAFADRLFGGNVQDYTYLIMGVGAGAVIGAVIVTLNAPPRPAMMFFWSSLAACLSLVAFSATP
GILSATLAATILGFFMCISAATSQLVMVLDTEESVTGRVLSLWGALMRGAPALGALATGAVLDLMGYRLPLALSGLIAAV
LTGGAIYLFTRSPGARPDAA
>Mature_419_residues
TPPEKAGAPHLTGTAALVRVMADTAYRNLFLASTAVMASQWMQRIALGWIMWELTGSTTWLGLLASAELLPGLFFGPLGG
VLADRMSRKRMVLICQIAAFVISVATGIVVFLGLSTPLLLMVLTAGGGIAAALQESARTLLLRDATPRDCLPTGMSMTAI
SVNVTRFLGPALAGPLVIWPGPASIFWINAAVALVMIATVLTLRLKHATPAPATREPFLRQLWIGMKGASSHPVVTPVLL
VFAATAFLVRPVYELMPAFADRLFGGNVQDYTYLIMGVGAGAVIGAVIVTLNAPPRPAMMFFWSSLAACLSLVAFSATPG
ILSATLAATILGFFMCISAATSQLVMVLDTEESVTGRVLSLWGALMRGAPALGALATGAVLDLMGYRLPLALSGLIAAVL
TGGAIYLFTRSPGARPDAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43883; Mature: 43752

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPEKAGAPHLTGTAALVRVMADTAYRNLFLASTAVMASQWMQRIALGWIMWELTGSTT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
WLGLLASAELLPGLFFGPLGGVLADRMSRKRMVLICQIAAFVISVATGIVVFLGLSTPLL
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LMVLTAGGGIAAALQESARTLLLRDATPRDCLPTGMSMTAISVNVTRFLGPALAGPLVIW
HHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEE
PGPASIFWINAAVALVMIATVLTLRLKHATPAPATREPFLRQLWIGMKGASSHPVVTPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
LVFAATAFLVRPVYELMPAFADRLFGGNVQDYTYLIMGVGAGAVIGAVIVTLNAPPRPAM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHEEECCCCCHHH
MFFWSSLAACLSLVAFSATPGILSATLAATILGFFMCISAATSQLVMVLDTEESVTGRVL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHH
SLWGALMRGAPALGALATGAVLDLMGYRLPLALSGLIAAVLTGGAIYLFTRSPGARPDAA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TPPEKAGAPHLTGTAALVRVMADTAYRNLFLASTAVMASQWMQRIALGWIMWELTGSTT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
WLGLLASAELLPGLFFGPLGGVLADRMSRKRMVLICQIAAFVISVATGIVVFLGLSTPLL
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LMVLTAGGGIAAALQESARTLLLRDATPRDCLPTGMSMTAISVNVTRFLGPALAGPLVIW
HHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEE
PGPASIFWINAAVALVMIATVLTLRLKHATPAPATREPFLRQLWIGMKGASSHPVVTPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
LVFAATAFLVRPVYELMPAFADRLFGGNVQDYTYLIMGVGAGAVIGAVIVTLNAPPRPAM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHEEECCCCCHHH
MFFWSSLAACLSLVAFSATPGILSATLAATILGFFMCISAATSQLVMVLDTEESVTGRVL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHH
SLWGALMRGAPALGALATGAVLDLMGYRLPLALSGLIAAVLTGGAIYLFTRSPGARPDAA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA