| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800339
Identifier: 114800339
GI number: 114800339
Start: 1277294
End: 1278637
Strand: Reverse
Name: 114800339
Synonym: HNE_1253
Alternate gene names: NA
Gene position: 1278637-1277294 (Counterclockwise)
Preceding gene: 114799230
Following gene: 114797293
Centisome position: 34.51
GC content: 64.43
Gene sequence:
>1344_bases GTGTCTCCCCTCGCCGGGGGCCATCTGGCGACGCTCAGCACGCTCGACATGCTGATCAGCGCCGCCACCTTCTCCTCCCT CGGCATTGTCCTGCCCCACATGGTCGCAGAGCTTGAGTGGAGCTGGTCGCAGGCCGGCCTCGGCTTCACCATCCTTGGCG CAGCGTGTGGCGGTTCCTCCCTCTTCCCCACGCTGGTCATCCGCAAGCTGGGCGTCCGCATTGCGCTGATCCTCGGCGGC CTCCTGATGGCGCTGGGCCTCTTCACGATGAGCACGGTAAACAACCTGCTCCAGTATTTCATTGCCGCCGCCATCTGCGG GGTTGCCTACCAGATGCTCGGCACCATCCCGTCCACCTTCGTCATCAGCCGCCACTTCAAGAATCGCTCCACCGCGCTGG GCCTCTATTTCACCATAGGCGGCTTCGGCAATGTGATCGGCCCGTGGATGGTGATGGCCGTCCTCTCGGTCGAAGGCCAG GTCTGGCGCGACTATTGGGTCTACCAGTCACTGCTCCTTCTCGCGACCGGTGTTGCGGGCGGCCTCATCATCGGCCTTGA CAAACGCTTTTCTCAGCCTGCGGAGCGTGAGCTTCAGGAACCCGCCACCCCGGCGAAGCCAGAGCCCGCCCTCGCCGCAG AATCGACGCCCGCCAAGCCCTCTCGCGTCTACATTTCCCCCATCGACTGGGGCGTCAAACAGGCGATGCGCACGCCGCAA TACAAGATCCTGGTGGCCGCCTATTTCGCAAACCTCATGGCTCTGGTCACCGTCACCAGCCTCTCGGTCGGCCACCTTGT CGAGCGCGGCGTCTCCAGTGAAGTGGCCGGCGCGATGCTCAGCCTTGAAGCCTTCATCGCCGTGCTGACCCGCATTGCGG GCGGCTTCCTGGGAGAACGCATCGACCCGCGCTATCTGATGGTCGTCTCCCTCGCCGCCACCTCCATCGGCTGCGCCGTG CTCGCCACCTCCGACTCTCACTCCATCCTGTTGATCTACGCTATCGGCACCGGCATCGGCTTCGGCCTCACGGCCCTCTC CTGCACCGTGCTGATGATGAATTATTTCGGCCAGCGCCATAACCTCGAACTCTTCTCGTCCATGTGCCTCGTCGGCGCGG CCTCAGCCCTTGGCCCGACGATTGGCGGCGTGATCCGTGATCTGACAGGCAACTTCGTGCTGATGTTCCTGATCCTGTCG GCCGTCGCCGCCATCGTCTGGGTCGCCGTGGTGATGATGCGCGCCCCGCAGACGGATGAAACATCGGGCGCCGAAAGCAC TGGCCCCAACACCGCCCCCGACACGGGCCGCGATGCGCCCGCCATCGCTGAACGAACCGCTTAA
Upstream 100 bases:
>100_bases GATCCTGGCCCGCGAACTGCAACGCCGCCCCCGCTAAAACAGGCTGAGAGCAAGAGAGAACCCGATGCTGAATTCCGGAA TCTTCAAATCCGTCCGTTCC
Downstream 100 bases:
>100_bases TTTCCAATACGTGGAGCCCAATAACCATGTTGCCCAATCATAAAATGTTCGGTGTCTTCCTGCCCATCGCCAATGGCGGC TGGATCGTCTCGAAGAACAC
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Oxalate/Formate Antiporter; MFS Permease; MFS Family Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSPLAGGHLATLSTLDMLISAATFSSLGIVLPHMVAELEWSWSQAGLGFTILGAACGGSSLFPTLVIRKLGVRIALILGG LLMALGLFTMSTVNNLLQYFIAAAICGVAYQMLGTIPSTFVISRHFKNRSTALGLYFTIGGFGNVIGPWMVMAVLSVEGQ VWRDYWVYQSLLLLATGVAGGLIIGLDKRFSQPAERELQEPATPAKPEPALAAESTPAKPSRVYISPIDWGVKQAMRTPQ YKILVAAYFANLMALVTVTSLSVGHLVERGVSSEVAGAMLSLEAFIAVLTRIAGGFLGERIDPRYLMVVSLAATSIGCAV LATSDSHSILLIYAIGTGIGFGLTALSCTVLMMNYFGQRHNLELFSSMCLVGAASALGPTIGGVIRDLTGNFVLMFLILS AVAAIVWVAVVMMRAPQTDETSGAESTGPNTAPDTGRDAPAIAERTA
Sequences:
>Translated_447_residues MSPLAGGHLATLSTLDMLISAATFSSLGIVLPHMVAELEWSWSQAGLGFTILGAACGGSSLFPTLVIRKLGVRIALILGG LLMALGLFTMSTVNNLLQYFIAAAICGVAYQMLGTIPSTFVISRHFKNRSTALGLYFTIGGFGNVIGPWMVMAVLSVEGQ VWRDYWVYQSLLLLATGVAGGLIIGLDKRFSQPAERELQEPATPAKPEPALAAESTPAKPSRVYISPIDWGVKQAMRTPQ YKILVAAYFANLMALVTVTSLSVGHLVERGVSSEVAGAMLSLEAFIAVLTRIAGGFLGERIDPRYLMVVSLAATSIGCAV LATSDSHSILLIYAIGTGIGFGLTALSCTVLMMNYFGQRHNLELFSSMCLVGAASALGPTIGGVIRDLTGNFVLMFLILS AVAAIVWVAVVMMRAPQTDETSGAESTGPNTAPDTGRDAPAIAERTA >Mature_446_residues SPLAGGHLATLSTLDMLISAATFSSLGIVLPHMVAELEWSWSQAGLGFTILGAACGGSSLFPTLVIRKLGVRIALILGGL LMALGLFTMSTVNNLLQYFIAAAICGVAYQMLGTIPSTFVISRHFKNRSTALGLYFTIGGFGNVIGPWMVMAVLSVEGQV WRDYWVYQSLLLLATGVAGGLIIGLDKRFSQPAERELQEPATPAKPEPALAAESTPAKPSRVYISPIDWGVKQAMRTPQY KILVAAYFANLMALVTVTSLSVGHLVERGVSSEVAGAMLSLEAFIAVLTRIAGGFLGERIDPRYLMVVSLAATSIGCAVL ATSDSHSILLIYAIGTGIGFGLTALSCTVLMMNYFGQRHNLELFSSMCLVGAASALGPTIGGVIRDLTGNFVLMFLILSA VAAIVWVAVVMMRAPQTDETSGAESTGPNTAPDTGRDAPAIAERTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47043; Mature: 46912
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLAGGHLATLSTLDMLISAATFSSLGIVLPHMVAELEWSWSQAGLGFTILGAACGGSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCC LFPTLVIRKLGVRIALILGGLLMALGLFTMSTVNNLLQYFIAAAICGVAYQMLGTIPSTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VISRHFKNRSTALGLYFTIGGFGNVIGPWMVMAVLSVEGQVWRDYWVYQSLLLLATGVAG HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GLIIGLDKRFSQPAERELQEPATPAKPEPALAAESTPAKPSRVYISPIDWGVKQAMRTPQ CEEEECCHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCC YKILVAAYFANLMALVTVTSLSVGHLVERGVSSEVAGAMLSLEAFIAVLTRIAGGFLGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDPRYLMVVSLAATSIGCAVLATSDSHSILLIYAIGTGIGFGLTALSCTVLMMNYFGQRH CCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC NLELFSSMCLVGAASALGPTIGGVIRDLTGNFVLMFLILSAVAAIVWVAVVMMRAPQTDE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSGAESTGPNTAPDTGRDAPAIAERTA CCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure SPLAGGHLATLSTLDMLISAATFSSLGIVLPHMVAELEWSWSQAGLGFTILGAACGGSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCC LFPTLVIRKLGVRIALILGGLLMALGLFTMSTVNNLLQYFIAAAICGVAYQMLGTIPSTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VISRHFKNRSTALGLYFTIGGFGNVIGPWMVMAVLSVEGQVWRDYWVYQSLLLLATGVAG HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GLIIGLDKRFSQPAERELQEPATPAKPEPALAAESTPAKPSRVYISPIDWGVKQAMRTPQ CEEEECCHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCC YKILVAAYFANLMALVTVTSLSVGHLVERGVSSEVAGAMLSLEAFIAVLTRIAGGFLGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDPRYLMVVSLAATSIGCAVLATSDSHSILLIYAIGTGIGFGLTALSCTVLMMNYFGQRH CCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC NLELFSSMCLVGAASALGPTIGGVIRDLTGNFVLMFLILSAVAAIVWVAVVMMRAPQTDE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSGAESTGPNTAPDTGRDAPAIAERTA CCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA