Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798850

Identifier: 114798850

GI number: 114798850

Start: 3673018

End: 3674562

Strand: Direct

Name: 114798850

Synonym: HNE_3539

Alternate gene names: NA

Gene position: 3673018-3674562 (Clockwise)

Preceding gene: 114797143

Following gene: 114798332

Centisome position: 99.14

GC content: 63.37

Gene sequence:

>1545_bases
ATGCGGGCGTATGCCGAAGCGCACGCGCTGTGTCTGGATGTGTTGAAGGACGCGCCCCGGACCGGAGAGGTCTACTATCT
GCTTGGCCAGCTGACACTGGATCACAACAATATCGGCAAGGCAGAGGAATTGTTCTCCGTCGCCGCCAGGTTCGACCCCG
GCCATGCCGGCGCGTTGGCCCAGCAGGCCCGCTGCCTGCTTGCGCTGAACCGGCGGGCCGATGCCGCGCAGGCCGCGCGC
GCAGCCGCAGCTCTGGAACCAACCGATGCCTTCACCTGTGACACAATTGGCGTGGTGATGAGCCGGGCAGGTCTCCACAC
CGAAGCCCTGCCCTTTTATGCCGCCGCGACGGCTGCTGAGCCCGGCAATGCCGGATACCAGTATAATTATGGCGCCGCCT
TGCAGTTTGCCGGCAGCATAGAGCCGGCGCGGCGGGCCTATCGGCAATGCGCTGCAGCTGACGCAAATGATACGCGCGGG
TTGCCATCCCTTGTTCAGCTGACCCGTCAGACAGCGGAAGAGAATGAGATTGGCATCCTGGAGGCGATGTTCGCCAAGCA
TTCGGAGGACCCTGATGGCGCGCTGCGGATTGGGCATGCCCTTGCCAAGGCGCATGAGGACCTGAAGCAACCTGAAGAAG
CGCTCCGCTGGCTTGCCCGCGCCAAGGCGCCCAAGCGTGGCCGTATACGTCATGATGCGGCCGCCGACGCGGCCTTGTTC
AAAGCAGCGCAGCGCAGTGCGGAAAGACTTTCATTCGCGCCAGGCGCAGGGCGCAGTGGCCCGGTCTTTATTTGCGGCAT
GCCGCGCACGGGAACCACGCTGGTTGACCGTATTCTTTCCAGCCACAGCGCGCTGGTGCCTGCCGGAGAGCTGACCGACT
TTGCGCTGTGTCTGAAACGGCTGGCACGGACGCCGTCCAATCTTGTGCTCGATCCCGAAACACTTGACGCGGCCAGCCGG
GTGGATCTCTCCGCCCTCGGAGCAGACTATCTGGAGAGCGTGCGTGCGTCGCTCGGGCTTGAGGGCCGGTTCACCGACAA
GATGCCGCTGAACATTCTGCTGGCGCCCGTCATTCTGGCAGCGCTGCCGGAAGCGCGGATCATCTGCCTTCGGCGCCATC
CCGCCGATACGGTGCTTTCCAATTACCGGCAGATGTTTGCCACCAGTTTTTCCTACTACAACTATGCCTACACGCTGGAG
GACACGGCGCGCTACTATGCCGGGTTTGACCGGCTCGTGCGCCACTATGAAAAAACCCTGCCGCCGGAGCGGTTTACGGT
GGTCCATTATGAGCAGGTGGTGACCGATCTGGAGACGGAGACGCGCAGGCTGCTGGCATTCTGCGGTCTGCCGTTTGAAG
AGGGCTGCCTGGCCTTTCACGAGAATACGGCGCCGGTGGCGACTGCGTCTTCCGCCCAGGTGCGCGAGCCGCTCTATACA
TCAGCTTTGGCCAGGTGGCGGCGGTATGAGGCCGGACTTGGGCCAGCGCTTGACATTCTTGAAGCCGAAGGCTGCCTTCC
GCGGGGAGAACGTGAGGCCCGGTGA

Upstream 100 bases:

>100_bases
CCAAAACTGATGCAGCCTCGGGAGACTGACCCTGCAGAAGACATTTTCCAGCACGAGTTTACCCGATCCCAGACTCGCGG
AGGCTGCACGTCTGTTGCGA

Downstream 100 bases:

>100_bases
CTGGCGCTTGGCGCGCGCGGCGTTAGGGTGGGCGCCGATAAACTCTAAGGGAGCCAACGCCATGCAACATCGCCGCCTCG
GTAAAAGCGCCATCTATGTT

Product: sulfotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MRAYAEAHALCLDVLKDAPRTGEVYYLLGQLTLDHNNIGKAEELFSVAARFDPGHAGALAQQARCLLALNRRADAAQAAR
AAAALEPTDAFTCDTIGVVMSRAGLHTEALPFYAAATAAEPGNAGYQYNYGAALQFAGSIEPARRAYRQCAAADANDTRG
LPSLVQLTRQTAEENEIGILEAMFAKHSEDPDGALRIGHALAKAHEDLKQPEEALRWLARAKAPKRGRIRHDAAADAALF
KAAQRSAERLSFAPGAGRSGPVFICGMPRTGTTLVDRILSSHSALVPAGELTDFALCLKRLARTPSNLVLDPETLDAASR
VDLSALGADYLESVRASLGLEGRFTDKMPLNILLAPVILAALPEARIICLRRHPADTVLSNYRQMFATSFSYYNYAYTLE
DTARYYAGFDRLVRHYEKTLPPERFTVVHYEQVVTDLETETRRLLAFCGLPFEEGCLAFHENTAPVATASSAQVREPLYT
SALARWRRYEAGLGPALDILEAEGCLPRGEREAR

Sequences:

>Translated_514_residues
MRAYAEAHALCLDVLKDAPRTGEVYYLLGQLTLDHNNIGKAEELFSVAARFDPGHAGALAQQARCLLALNRRADAAQAAR
AAAALEPTDAFTCDTIGVVMSRAGLHTEALPFYAAATAAEPGNAGYQYNYGAALQFAGSIEPARRAYRQCAAADANDTRG
LPSLVQLTRQTAEENEIGILEAMFAKHSEDPDGALRIGHALAKAHEDLKQPEEALRWLARAKAPKRGRIRHDAAADAALF
KAAQRSAERLSFAPGAGRSGPVFICGMPRTGTTLVDRILSSHSALVPAGELTDFALCLKRLARTPSNLVLDPETLDAASR
VDLSALGADYLESVRASLGLEGRFTDKMPLNILLAPVILAALPEARIICLRRHPADTVLSNYRQMFATSFSYYNYAYTLE
DTARYYAGFDRLVRHYEKTLPPERFTVVHYEQVVTDLETETRRLLAFCGLPFEEGCLAFHENTAPVATASSAQVREPLYT
SALARWRRYEAGLGPALDILEAEGCLPRGEREAR
>Mature_514_residues
MRAYAEAHALCLDVLKDAPRTGEVYYLLGQLTLDHNNIGKAEELFSVAARFDPGHAGALAQQARCLLALNRRADAAQAAR
AAAALEPTDAFTCDTIGVVMSRAGLHTEALPFYAAATAAEPGNAGYQYNYGAALQFAGSIEPARRAYRQCAAADANDTRG
LPSLVQLTRQTAEENEIGILEAMFAKHSEDPDGALRIGHALAKAHEDLKQPEEALRWLARAKAPKRGRIRHDAAADAALF
KAAQRSAERLSFAPGAGRSGPVFICGMPRTGTTLVDRILSSHSALVPAGELTDFALCLKRLARTPSNLVLDPETLDAASR
VDLSALGADYLESVRASLGLEGRFTDKMPLNILLAPVILAALPEARIICLRRHPADTVLSNYRQMFATSFSYYNYAYTLE
DTARYYAGFDRLVRHYEKTLPPERFTVVHYEQVVTDLETETRRLLAFCGLPFEEGCLAFHENTAPVATASSAQVREPLYT
SALARWRRYEAGLGPALDILEAEGCLPRGEREAR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863
- InterPro:   IPR001440
- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 55991; Mature: 55991

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAYAEAHALCLDVLKDAPRTGEVYYLLGQLTLDHNNIGKAEELFSVAARFDPGHAGALA
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHH
QQARCLLALNRRADAAQAARAAAALEPTDAFTCDTIGVVMSRAGLHTEALPFYAAATAAE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCC
PGNAGYQYNYGAALQFAGSIEPARRAYRQCAAADANDTRGLPSLVQLTRQTAEENEIGIL
CCCCCCEECCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
EAMFAKHSEDPDGALRIGHALAKAHEDLKQPEEALRWLARAKAPKRGRIRHDAAADAALF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KAAQRSAERLSFAPGAGRSGPVFICGMPRTGTTLVDRILSSHSALVPAGELTDFALCLKR
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LARTPSNLVLDPETLDAASRVDLSALGADYLESVRASLGLEGRFTDKMPLNILLAPVILA
HHCCCCCEEECCHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ALPEARIICLRRHPADTVLSNYRQMFATSFSYYNYAYTLEDTARYYAGFDRLVRHYEKTL
HCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHC
PPERFTVVHYEQVVTDLETETRRLLAFCGLPFEEGCLAFHENTAPVATASSAQVREPLYT
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHH
SALARWRRYEAGLGPALDILEAEGCLPRGEREAR
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRAYAEAHALCLDVLKDAPRTGEVYYLLGQLTLDHNNIGKAEELFSVAARFDPGHAGALA
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHH
QQARCLLALNRRADAAQAARAAAALEPTDAFTCDTIGVVMSRAGLHTEALPFYAAATAAE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCC
PGNAGYQYNYGAALQFAGSIEPARRAYRQCAAADANDTRGLPSLVQLTRQTAEENEIGIL
CCCCCCEECCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
EAMFAKHSEDPDGALRIGHALAKAHEDLKQPEEALRWLARAKAPKRGRIRHDAAADAALF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KAAQRSAERLSFAPGAGRSGPVFICGMPRTGTTLVDRILSSHSALVPAGELTDFALCLKR
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LARTPSNLVLDPETLDAASRVDLSALGADYLESVRASLGLEGRFTDKMPLNILLAPVILA
HHCCCCCEEECCHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ALPEARIICLRRHPADTVLSNYRQMFATSFSYYNYAYTLEDTARYYAGFDRLVRHYEKTL
HCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHC
PPERFTVVHYEQVVTDLETETRRLLAFCGLPFEEGCLAFHENTAPVATASSAQVREPLYT
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHH
SALARWRRYEAGLGPALDILEAEGCLPRGEREAR
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]