| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797143
Identifier: 114797143
GI number: 114797143
Start: 3667992
End: 3669125
Strand: Direct
Name: 114797143
Synonym: HNE_3536
Alternate gene names: NA
Gene position: 3667992-3669125 (Clockwise)
Preceding gene: 114799299
Following gene: 114798850
Centisome position: 99.0
GC content: 66.84
Gene sequence:
>1134_bases ATGGCTGACGATACAGCGCCCATTTCCGGATACATCGCACCAGGCTTCGAGCCGGTGCGCGAGGCGTTCGAGGCCAACTT TGCGGGCGGCGAAGAACACGGCGCGACCTTTGCCTTGCGCATTGGCGGCGAGACCCTGGTGGATCTGCGCGGCGGCTGGG CCGACCGGGCCAAGGAGCGCGTCTGGGCAGAGGATACCGTTGTACCGATCTATTCGGCCTCCAAAGGCATCTCGGCCCTG GTGCTGGCGATGGCGGTGGAAGCCCTGCCCGCGGGTTATGAAACGCCGGTCGCCGATGTGTGGCCGGAATTTGCCGCTGA AGGCAAAGGCGAGGTGACAATCGGCCAGATGGTGAGCCATCAGGCGGGGCTGCCGGGCTTTGAAAAGGAAATTGATCCGG CGCTGTGGCTCGATCCGCCGGCCTGCGCGGCCGCGATTGCCGCCCTGGCCCCGATGTGGCCGCCGGGCAGCGCGCATGGC TATCATCCCCTGACCTGGGGCTATCTTGTGGGCGAAGTGGTGAACCGGATCACCGGGCGGACTGTGGGTGCGATCCTGAA GGAAGACATCTGCGGGCCCGCCGGCATCGACTTCCAGATTGGTCTGCCGGAGAAAGACGAGCCCCGCGTGGGCGACATGC TGCGGCCCAAGGCGCTGGCGCCGCTGGGCGAGATTACCCCGCCGCGCCGGGCGGCGTTTGTTTCCAAATGGTCCTCGCCT GACCGGGCGGGGCGCCCGTGGCGGGAAATCGAGATCCCGTCTGCCAACGGCCATGGCGCAGCGCTGGGCGTGGCGAGCCT TTATGAAGCCTATGCCCGTGGCGGCCAGATTGCCGGCGGCAAAACGCTTCTTCGCAGCGATACGCTCGACGCGCTGATCC GCCCGCGGGTGGATGGGCCGGACCTGGTGTTGCCGATGCATACGAAGTTTGGCGCGGGCATCATGATCAACAGCCATGGC AAGTTCGGGCCGAACCCGGAGACGCTTGGCCATTCCGGCTGGGGCGGGTCCATGGCGATTGCCGACCCGGCGCGGGAGCT TTCGGCAGCCTATGTGATGAACCGGCAATCGGCCTCACTGGTGGGCGACCCGCGCGCCGTGCGCCTTGTCGAAGCGGCCT ATGGCTGCCTCTGA
Upstream 100 bases:
>100_bases AAGCCGCCTTTTGAAAGTGTTGGATTTGCCGTGACGCTGCCGGAAACGGTGATACGCAATGGCGAGGCCTTCAAACGGTT CCAGATGGAGAAACGGCTCA
Downstream 100 bases:
>100_bases TTGGAAACTGGCACGGTGATTGCAACGACAGATGCGGAAATTGGAAGGCTCCATTTCCGTCATGCACTTTACCTTTGCAG CGGCTTCCAGGCGGAGGCCG
Product: putative esterase
Products: NA
Alternate protein names: Esterase; Carboxylesterase; Beta-Lactamase Class C; Esterase/Lipase LipP; Esterase A; Esterase/Lipase/Beta-Lactamase; Lactone Hydrolase; Beta-Lactamase Protein; Esterase LipL; Lipase LipD; Lipase/Esterase/Beta-Lactamase; Fusion Of Enoyl-CoA Hydratase; Beta-Lactamase-Like Protein; Lipase LipE; Hydrolase; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family; Secreted Protein
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MADDTAPISGYIAPGFEPVREAFEANFAGGEEHGATFALRIGGETLVDLRGGWADRAKERVWAEDTVVPIYSASKGISAL VLAMAVEALPAGYETPVADVWPEFAAEGKGEVTIGQMVSHQAGLPGFEKEIDPALWLDPPACAAAIAALAPMWPPGSAHG YHPLTWGYLVGEVVNRITGRTVGAILKEDICGPAGIDFQIGLPEKDEPRVGDMLRPKALAPLGEITPPRRAAFVSKWSSP DRAGRPWREIEIPSANGHGAALGVASLYEAYARGGQIAGGKTLLRSDTLDALIRPRVDGPDLVLPMHTKFGAGIMINSHG KFGPNPETLGHSGWGGSMAIADPARELSAAYVMNRQSASLVGDPRAVRLVEAAYGCL
Sequences:
>Translated_377_residues MADDTAPISGYIAPGFEPVREAFEANFAGGEEHGATFALRIGGETLVDLRGGWADRAKERVWAEDTVVPIYSASKGISAL VLAMAVEALPAGYETPVADVWPEFAAEGKGEVTIGQMVSHQAGLPGFEKEIDPALWLDPPACAAAIAALAPMWPPGSAHG YHPLTWGYLVGEVVNRITGRTVGAILKEDICGPAGIDFQIGLPEKDEPRVGDMLRPKALAPLGEITPPRRAAFVSKWSSP DRAGRPWREIEIPSANGHGAALGVASLYEAYARGGQIAGGKTLLRSDTLDALIRPRVDGPDLVLPMHTKFGAGIMINSHG KFGPNPETLGHSGWGGSMAIADPARELSAAYVMNRQSASLVGDPRAVRLVEAAYGCL >Mature_376_residues ADDTAPISGYIAPGFEPVREAFEANFAGGEEHGATFALRIGGETLVDLRGGWADRAKERVWAEDTVVPIYSASKGISALV LAMAVEALPAGYETPVADVWPEFAAEGKGEVTIGQMVSHQAGLPGFEKEIDPALWLDPPACAAAIAALAPMWPPGSAHGY HPLTWGYLVGEVVNRITGRTVGAILKEDICGPAGIDFQIGLPEKDEPRVGDMLRPKALAPLGEITPPRRAAFVSKWSSPD RAGRPWREIEIPSANGHGAALGVASLYEAYARGGQIAGGKTLLRSDTLDALIRPRVDGPDLVLPMHTKFGAGIMINSHGK FGPNPETLGHSGWGGSMAIADPARELSAAYVMNRQSASLVGDPRAVRLVEAAYGCL
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17538001, Length=392, Percent_Identity=31.3775510204082, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17535191, Length=388, Percent_Identity=30.1546391752577, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71983659, Length=402, Percent_Identity=29.6019900497512, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17538474, Length=401, Percent_Identity=30.1745635910224, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17535177, Length=397, Percent_Identity=28.463476070529, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71983666, Length=311, Percent_Identity=30.5466237942122, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71990590, Length=374, Percent_Identity=28.0748663101604, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39712; Mature: 39580
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDTAPISGYIAPGFEPVREAFEANFAGGEEHGATFALRIGGETLVDLRGGWADRAKER CCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHH VWAEDTVVPIYSASKGISALVLAMAVEALPAGYETPVADVWPEFAAEGKGEVTIGQMVSH HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHCCCCCEEHHHHHHH QAGLPGFEKEIDPALWLDPPACAAAIAALAPMWPPGSAHGYHPLTWGYLVGEVVNRITGR HCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCH TVGAILKEDICGPAGIDFQIGLPEKDEPRVGDMLRPKALAPLGEITPPRRAAFVSKWSSP HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCC DRAGRPWREIEIPSANGHGAALGVASLYEAYARGGQIAGGKTLLRSDTLDALIRPRVDGP CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC DLVLPMHTKFGAGIMINSHGKFGPNPETLGHSGWGGSMAIADPARELSAAYVMNRQSASL CEEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHH VGDPRAVRLVEAAYGCL CCCCHHHHHHHHHHCCC >Mature Secondary Structure ADDTAPISGYIAPGFEPVREAFEANFAGGEEHGATFALRIGGETLVDLRGGWADRAKER CCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHH VWAEDTVVPIYSASKGISALVLAMAVEALPAGYETPVADVWPEFAAEGKGEVTIGQMVSH HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHCCCCCEEHHHHHHH QAGLPGFEKEIDPALWLDPPACAAAIAALAPMWPPGSAHGYHPLTWGYLVGEVVNRITGR HCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCH TVGAILKEDICGPAGIDFQIGLPEKDEPRVGDMLRPKALAPLGEITPPRRAAFVSKWSSP HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCC DRAGRPWREIEIPSANGHGAALGVASLYEAYARGGQIAGGKTLLRSDTLDALIRPRVDGP CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC DLVLPMHTKFGAGIMINSHGKFGPNPETLGHSGWGGSMAIADPARELSAAYVMNRQSASL CEEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHH VGDPRAVRLVEAAYGCL CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA