| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is tas [H]
Identifier: 114798332
GI number: 114798332
Start: 3674624
End: 3675640
Strand: Direct
Name: tas [H]
Synonym: HNE_3540
Alternate gene names: 114798332
Gene position: 3674624-3675640 (Clockwise)
Preceding gene: 114798850
Following gene: 114798374
Centisome position: 99.18
GC content: 58.9
Gene sequence:
>1017_bases ATGCAACATCGCCGCCTCGGTAAAAGCGCCATCTATGTTTCCGACATCTGCATGGGAACCATGACCTTCGGAACCCAGAC AGATGAAAAGGAAGCGTTCCGCATTCTCGATGCGAGCCTGGACGCAGGGATCAACTTTTTCGACACGGCCGAGAATTATC CCGTACCGCCGGACCTAAAATATGGCGGGCTGACAGAGGAAATCTTCGGGCGCTGGATGAAAACCAAGGACCGGGATTCG ATTATCCTGGCCACCAAAGTGTGCGGGCCTTCGCATGGCTGGATCAAGGGATCGCAGCGGGCGGGCATGACGGCGCTGGA CCGGCACAATATCCGCCGCGCCGTGGAGGCGAGCCTGACCCGGCTGCAGACGGACTATATCGATCTTTACCAGACCCATT GGCCTGACCACGGGACCGAGTTCGATGAGACGATGGAAGCCCTCGATGATCTTGTGCGCGAGGGATACGTTCGGATCGTG GGCTGCTCGAACGAGGACGCCTGGGGCCTGATGAAATCCATTGAGACGTCCAATCGTCTCGGAACGGTCCGTTATCAGAC GATCCAGAATAACTTCTCGCTCAACAATCGCCGGTTCGAGGACGCGCTGGCGAAGATCTGTGACCGTGAGGGCGTGAGCC TGATCCCTTATTCCCCTCTGGGCGGCGGCGTGCTGTCGGGCAAGTATCAGAACGGCGCGTTTCCGGAAGGCGCCCGGTTC TCGGCCTATGCCAACAAGGGCGGACGCCATACGGCGATGGCGCAGCGCTTCGTCAACGAAAAGTCCCTCGCCGCAACGGC GCGCTATATGGAGATCGCCAAGGAAGCGGGCATGAGCCCGGTGACGCTGGCGACGGCCTGGTCAAAGCAGCACAGCTTTG TGGCCTCCACGATTGTCGGCGTTTCGAAGTTTGATCAGCTCGAAGAGATTCTGGCCGCAGGCGACCTGGTGCTTTCGGAC GATGTGATGAAAGCGTGTGAGAAGGTTACGCGGGAAATTCTCTATCCGATGGGGTGA
Upstream 100 bases:
>100_bases GAAGGCTGCCTTCCGCGGGGAGAACGTGAGGCCCGGTGACTGGCGCTTGGCGCGCGCGGCGTTAGGGTGGGCGCCGATAA ACTCTAAGGGAGCCAACGCC
Downstream 100 bases:
>100_bases GAGGTTCGGCAAGCACCTCCGGCCTCCCCTGCCTTGGCGGGGGAGGTAATGAGGCTGTGTTTGAACGCGTTTAAGAGCTG TTGATCCCGGCCCAGGCCTC
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQHRRLGKSAIYVSDICMGTMTFGTQTDEKEAFRILDASLDAGINFFDTAENYPVPPDLKYGGLTEEIFGRWMKTKDRDS IILATKVCGPSHGWIKGSQRAGMTALDRHNIRRAVEASLTRLQTDYIDLYQTHWPDHGTEFDETMEALDDLVREGYVRIV GCSNEDAWGLMKSIETSNRLGTVRYQTIQNNFSLNNRRFEDALAKICDREGVSLIPYSPLGGGVLSGKYQNGAFPEGARF SAYANKGGRHTAMAQRFVNEKSLAATARYMEIAKEAGMSPVTLATAWSKQHSFVASTIVGVSKFDQLEEILAAGDLVLSD DVMKACEKVTREILYPMG
Sequences:
>Translated_338_residues MQHRRLGKSAIYVSDICMGTMTFGTQTDEKEAFRILDASLDAGINFFDTAENYPVPPDLKYGGLTEEIFGRWMKTKDRDS IILATKVCGPSHGWIKGSQRAGMTALDRHNIRRAVEASLTRLQTDYIDLYQTHWPDHGTEFDETMEALDDLVREGYVRIV GCSNEDAWGLMKSIETSNRLGTVRYQTIQNNFSLNNRRFEDALAKICDREGVSLIPYSPLGGGVLSGKYQNGAFPEGARF SAYANKGGRHTAMAQRFVNEKSLAATARYMEIAKEAGMSPVTLATAWSKQHSFVASTIVGVSKFDQLEEILAAGDLVLSD DVMKACEKVTREILYPMG >Mature_338_residues MQHRRLGKSAIYVSDICMGTMTFGTQTDEKEAFRILDASLDAGINFFDTAENYPVPPDLKYGGLTEEIFGRWMKTKDRDS IILATKVCGPSHGWIKGSQRAGMTALDRHNIRRAVEASLTRLQTDYIDLYQTHWPDHGTEFDETMEALDDLVREGYVRIV GCSNEDAWGLMKSIETSNRLGTVRYQTIQNNFSLNNRRFEDALAKICDREGVSLIPYSPLGGGVLSGKYQNGAFPEGARF SAYANKGGRHTAMAQRFVNEKSLAATARYMEIAKEAGMSPVTLATAWSKQHSFVASTIVGVSKFDQLEEILAAGDLVLSD DVMKACEKVTREILYPMG
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=344, Percent_Identity=29.0697674418605, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI27436964, Length=344, Percent_Identity=28.7790697674419, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI27436962, Length=344, Percent_Identity=28.7790697674419, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI27436969, Length=320, Percent_Identity=29.6875, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI4504825, Length=318, Percent_Identity=29.559748427673, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI27436971, Length=317, Percent_Identity=27.4447949526814, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI223718702, Length=310, Percent_Identity=27.4193548387097, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI41327764, Length=224, Percent_Identity=30.3571428571429, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI41152114, Length=225, Percent_Identity=29.7777777777778, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1789199, Length=354, Percent_Identity=41.2429378531073, Blast_Score=254, Evalue=5e-69, Organism=Escherichia coli, GI87081735, Length=338, Percent_Identity=30.7692307692308, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=29.2682926829268, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1788070, Length=334, Percent_Identity=29.940119760479, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI1788081, Length=234, Percent_Identity=29.4871794871795, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319958, Length=315, Percent_Identity=27.3015873015873, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=338, Percent_Identity=26.6272189349112, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325169, Length=344, Percent_Identity=26.1627906976744, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=334, Percent_Identity=27.2455089820359, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=258, Percent_Identity=25.5813953488372, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321052, Length=198, Percent_Identity=31.8181818181818, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640980, Length=350, Percent_Identity=24.5714285714286, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI45549126, Length=360, Percent_Identity=24.4444444444444, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24646155, Length=190, Percent_Identity=30.5263157894737, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646159, Length=218, Percent_Identity=26.605504587156, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 37584; Mature: 37584
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRRLGKSAIYVSDICMGTMTFGTQTDEKEAFRILDASLDAGINFFDTAENYPVPPDLK CCCCHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC YGGLTEEIFGRWMKTKDRDSIILATKVCGPSHGWIKGSQRAGMTALDRHNIRRAVEASLT CCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLQTDYIDLYQTHWPDHGTEFDETMEALDDLVREGYVRIVGCSNEDAWGLMKSIETSNRL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC GTVRYQTIQNNFSLNNRRFEDALAKICDREGVSLIPYSPLGGGVLSGKYQNGAFPEGARF CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCE SAYANKGGRHTAMAQRFVNEKSLAATARYMEIAKEAGMSPVTLATAWSKQHSFVASTIVG EHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH VSKFDQLEEILAAGDLVLSDDVMKACEKVTREILYPMG HHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQHRRLGKSAIYVSDICMGTMTFGTQTDEKEAFRILDASLDAGINFFDTAENYPVPPDLK CCCCHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC YGGLTEEIFGRWMKTKDRDSIILATKVCGPSHGWIKGSQRAGMTALDRHNIRRAVEASLT CCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLQTDYIDLYQTHWPDHGTEFDETMEALDDLVREGYVRIVGCSNEDAWGLMKSIETSNRL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC GTVRYQTIQNNFSLNNRRFEDALAKICDREGVSLIPYSPLGGGVLSGKYQNGAFPEGARF CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCE SAYANKGGRHTAMAQRFVNEKSLAATARYMEIAKEAGMSPVTLATAWSKQHSFVASTIVG EHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH VSKFDQLEEILAAGDLVLSDDVMKACEKVTREILYPMG HHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]