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The map label for this gene is yicC [H]

Identifier: 114798477

GI number: 114798477

Start: 2242736

End: 2243620

Strand: Reverse

Name: yicC [H]

Synonym: HNE_2154

Alternate gene names: 114798477

Gene position: 2243620-2242736 (Counterclockwise)

Preceding gene: 114800253

Following gene: 114798626

Centisome position: 60.56

GC content: 62.71

Gene sequence:

>885_bases
ATGGGTACACTGTCGGGGATGACGGGGTTCGCGCGGGTAACCGGCGAAGCCAGCTGGGGCGGGTGGGCCTGGGAGGCCAA
AAGCGTCAATGGCCGCTCGCTGGATGTACGCGTAAACCTGCCGCCGGGCGCTGAGCAGCTCGAGCGTGAGGTCAAGGCCA
TGGCGGCAGCACGCTTCAATCGCGGCTCGCTCCAGGTCAGCCTGCGTATTGAACTTGCTGCATCGGGCGCCGCGGCCGTT
ATCAATGAGGCATTGCTTTCGGAGCTCGCCCAGGCGGCGCGCAAGGTTTCCGGGCGCGAGCTTTCCGCCGAAGCCATCGC
GACACTGATGTCGGTAAAGGGCGTCGTCGATGCCGGATCAAGCTCCACCCGCGATATAATGGATGAGGCGGTGCTTGCGC
TGCTCTCCACTGGCGCCGCGCAGGCGCTCGACGAGCTTGCCGAAGGACGCAAATCTGAAGGCGCCTCACTGGAGGGTCTT
CTTGGTGATCTCCTCAACCAAATGGAGCACTTGAAGGCTGAGGCAGAGACCCACGCCGCGAGCCAGCCCGAGCTGATCCG
CGCGAAATTGACGAAACAGCTTGAGGATTTGGACCGCGAAGGGCGGGTGGACGCCGAGCGTTATGCCGCCGAAGTGGCCC
TGTCAGCGGCCAAGGCGGATGTCCGCGAGGAGTTGGATCGTCTATCGGCGCATATCAAGACGGGCCGCGAATTGCTCAGT
GCAGGCTCGCCGGCCGGGCGCAAGATTGATTTTCTGGCGCAGGAGCTGAACCGCGAAGCCAACACCCTCTGCTCCAAATC
CATCAGCCTCGATTTGACGAATGCGGGCCTTGGCCTCAAAGGGGTGATCGACCAGTTCAAGGAGCAATCGGCCAATGTCG
AATAG

Upstream 100 bases:

>100_bases
GCGGGCACCTCTTCGCCAAGACCCTGGCGGAACACAATCGCAATGTTGCGGCCTACCGCGCTTACGAGCGCGGCGAAATT
GAACGGGAGCGGGCAAACTG

Downstream 100 bases:

>100_bases
CGGACATCCCAAAGACCGGGGCAATCGCCGGGGCCTGATGCTGGTGCTTTCCAGCCCCTCGGGCGCGGGCAAGACCACGC
TGTCCCGGATGCTGCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MGTLSGMTGFARVTGEASWGGWAWEAKSVNGRSLDVRVNLPPGAEQLEREVKAMAAARFNRGSLQVSLRIELAASGAAAV
INEALLSELAQAARKVSGRELSAEAIATLMSVKGVVDAGSSSTRDIMDEAVLALLSTGAAQALDELAEGRKSEGASLEGL
LGDLLNQMEHLKAEAETHAASQPELIRAKLTKQLEDLDREGRVDAERYAAEVALSAAKADVREELDRLSAHIKTGRELLS
AGSPAGRKIDFLAQELNREANTLCSKSISLDLTNAGLGLKGVIDQFKEQSANVE

Sequences:

>Translated_294_residues
MGTLSGMTGFARVTGEASWGGWAWEAKSVNGRSLDVRVNLPPGAEQLEREVKAMAAARFNRGSLQVSLRIELAASGAAAV
INEALLSELAQAARKVSGRELSAEAIATLMSVKGVVDAGSSSTRDIMDEAVLALLSTGAAQALDELAEGRKSEGASLEGL
LGDLLNQMEHLKAEAETHAASQPELIRAKLTKQLEDLDREGRVDAERYAAEVALSAAKADVREELDRLSAHIKTGRELLS
AGSPAGRKIDFLAQELNREANTLCSKSISLDLTNAGLGLKGVIDQFKEQSANVE
>Mature_293_residues
GTLSGMTGFARVTGEASWGGWAWEAKSVNGRSLDVRVNLPPGAEQLEREVKAMAAARFNRGSLQVSLRIELAASGAAAVI
NEALLSELAQAARKVSGRELSAEAIATLMSVKGVVDAGSSSTRDIMDEAVLALLSTGAAQALDELAEGRKSEGASLEGLL
GDLLNQMEHLKAEAETHAASQPELIRAKLTKQLEDLDREGRVDAERYAAEVALSAAKADVREELDRLSAHIKTGRELLSA
GSPAGRKIDFLAQELNREANTLCSKSISLDLTNAGLGLKGVIDQFKEQSANVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=33.1081081081081, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31061; Mature: 30930

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLSGMTGFARVTGEASWGGWAWEAKSVNGRSLDVRVNLPPGAEQLEREVKAMAAARFN
CCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
RGSLQVSLRIELAASGAAAVINEALLSELAQAARKVSGRELSAEAIATLMSVKGVVDAGS
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
SSTRDIMDEAVLALLSTGAAQALDELAEGRKSEGASLEGLLGDLLNQMEHLKAEAETHAA
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SQPELIRAKLTKQLEDLDREGRVDAERYAAEVALSAAKADVREELDRLSAHIKTGRELLS
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSPAGRKIDFLAQELNREANTLCSKSISLDLTNAGLGLKGVIDQFKEQSANVE
CCCCCCCHHHHHHHHHCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTLSGMTGFARVTGEASWGGWAWEAKSVNGRSLDVRVNLPPGAEQLEREVKAMAAARFN
CCCCCCCHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
RGSLQVSLRIELAASGAAAVINEALLSELAQAARKVSGRELSAEAIATLMSVKGVVDAGS
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
SSTRDIMDEAVLALLSTGAAQALDELAEGRKSEGASLEGLLGDLLNQMEHLKAEAETHAA
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SQPELIRAKLTKQLEDLDREGRVDAERYAAEVALSAAKADVREELDRLSAHIKTGRELLS
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSPAGRKIDFLAQELNREANTLCSKSISLDLTNAGLGLKGVIDQFKEQSANVE
CCCCCCCHHHHHHHHHCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]