| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gmk
Identifier: 114798626
GI number: 114798626
Start: 2242093
End: 2242746
Strand: Reverse
Name: gmk
Synonym: HNE_2153
Alternate gene names: 114798626
Gene position: 2242746-2242093 (Counterclockwise)
Preceding gene: 114798477
Following gene: 114798261
Centisome position: 60.53
GC content: 61.01
Gene sequence:
>654_bases ATGTCGAATAGCGGACATCCCAAAGACCGGGGCAATCGCCGGGGCCTGATGCTGGTGCTTTCCAGCCCCTCGGGCGCGGG CAAGACCACGCTGTCCCGGATGCTGCTGGAAGAGTTCGGCGATGTGAAGCTTTCGATCTCCGCCACCACCCGGCCTCCGC GCCCCAATGAGGTTCACGGCGAAGACTATTACTTCAAGACGCCCGATGAATTTCACAGGATGATCGAGCGGCGCGAATTC CTCGAATGGGCGCATGTCTTCGACAAACATTACGGCACCCCGAAAGCCGACACGGTTGCCCGCCTCGAAGCGGGTGAAGA CGTCCTGTTCGATGTGGACTGGCAGGGGGCCGACGCGCTGCACGATCAGATGCCCAATGATGTGGTCTCGGTGTTCATCC TGCCGCCCAGCATTGAGGCATTGCAGGCGCGTCTTATGGGCCGTCCAGGGTCAACGCCGGAACTGGTTGCCCGCCGCATG GAGGACGCCAAGCGCGAGATCATGCACTGGCGGCGCTATGACTATGTCATCGTCAATGATGATCTCAACGTCGCCTACCA ACGCCTCAAGCGCATCCTGCTGGTCGAGCGGCTGAAGCGCCTGCGCCAGATTGATCTGGAAGATCACGTGCGCGCCCTGC TGGGCGAAGCTTAA
Upstream 100 bases:
>100_bases GAAGCCAACACCCTCTGCTCCAAATCCATCAGCCTCGATTTGACGAATGCGGGCCTTGGCCTCAAAGGGGTGATCGACCA GTTCAAGGAGCAATCGGCCA
Downstream 100 bases:
>100_bases GCCAGGCTTGTTGCCAGTTTGCGGAATTCCGCCTGTGTAAGCGTTTCGGCGCGCGCGGTCGGCTTGATGCCGCAATCTTC CAGCCAGGCTTCGGCTTTCA
Product: putative guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSNSGHPKDRGNRRGLMLVLSSPSGAGKTTLSRMLLEEFGDVKLSISATTRPPRPNEVHGEDYYFKTPDEFHRMIERREF LEWAHVFDKHYGTPKADTVARLEAGEDVLFDVDWQGADALHDQMPNDVVSVFILPPSIEALQARLMGRPGSTPELVARRM EDAKREIMHWRRYDYVIVNDDLNVAYQRLKRILLVERLKRLRQIDLEDHVRALLGEA
Sequences:
>Translated_217_residues MSNSGHPKDRGNRRGLMLVLSSPSGAGKTTLSRMLLEEFGDVKLSISATTRPPRPNEVHGEDYYFKTPDEFHRMIERREF LEWAHVFDKHYGTPKADTVARLEAGEDVLFDVDWQGADALHDQMPNDVVSVFILPPSIEALQARLMGRPGSTPELVARRM EDAKREIMHWRRYDYVIVNDDLNVAYQRLKRILLVERLKRLRQIDLEDHVRALLGEA >Mature_216_residues SNSGHPKDRGNRRGLMLVLSSPSGAGKTTLSRMLLEEFGDVKLSISATTRPPRPNEVHGEDYYFKTPDEFHRMIERREFL EWAHVFDKHYGTPKADTVARLEAGEDVLFDVDWQGADALHDQMPNDVVSVFILPPSIEALQARLMGRPGSTPELVARRME DAKREIMHWRRYDYVIVNDDLNVAYQRLKRILLVERLKRLRQIDLEDHVRALLGEA
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=191, Percent_Identity=37.696335078534, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI226874833, Length=191, Percent_Identity=37.696335078534, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI4504221, Length=191, Percent_Identity=37.696335078534, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI38570142, Length=182, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=46.875, Blast_Score=173, Evalue=6e-45, Organism=Caenorhabditis elegans, GI193203132, Length=181, Percent_Identity=35.3591160220994, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17508835, Length=181, Percent_Identity=35.3591160220994, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71988041, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988048, Length=188, Percent_Identity=28.7234042553192, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=39.344262295082, Blast_Score=139, Evalue=4e-34, Organism=Drosophila melanogaster, GI21356141, Length=190, Percent_Identity=33.6842105263158, Blast_Score=98, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_HYPNA (Q0C093)
Other databases:
- EMBL: CP000158 - RefSeq: YP_760850.1 - ProteinModelPortal: Q0C093 - SMR: Q0C093 - STRING: Q0C093 - GeneID: 4289885 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_2153 - NMPDR: fig|228405.5.peg.2074 - TIGR: HNE_2153 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: DIDWQGT - PhylomeDB: Q0C093 - BioCyc: HNEP81032:HNE_2153-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 25018; Mature: 24887
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSGHPKDRGNRRGLMLVLSSPSGAGKTTLSRMLLEEFGDVKLSISATTRPPRPNEVHG CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC EDYYFKTPDEFHRMIERREFLEWAHVFDKHYGTPKADTVARLEAGEDVLFDVDWQGADAL CCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCHHH HDQMPNDVVSVFILPPSIEALQARLMGRPGSTPELVARRMEDAKREIMHWRRYDYVIVND HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC DLNVAYQRLKRILLVERLKRLRQIDLEDHVRALLGEA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure SNSGHPKDRGNRRGLMLVLSSPSGAGKTTLSRMLLEEFGDVKLSISATTRPPRPNEVHG CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC EDYYFKTPDEFHRMIERREFLEWAHVFDKHYGTPKADTVARLEAGEDVLFDVDWQGADAL CCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCHHH HDQMPNDVVSVFILPPSIEALQARLMGRPGSTPELVARRMEDAKREIMHWRRYDYVIVND HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC DLNVAYQRLKRILLVERLKRLRQIDLEDHVRALLGEA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA