| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yceG [H]
Identifier: 114800253
GI number: 114800253
Start: 2243620
End: 2244657
Strand: Reverse
Name: yceG [H]
Synonym: HNE_2155
Alternate gene names: 114800253
Gene position: 2244657-2243620 (Counterclockwise)
Preceding gene: 114798980
Following gene: 114798477
Centisome position: 60.58
GC content: 57.9
Gene sequence:
>1038_bases ATGGGATTTCTGAGAACGCTCTTCGCCTGGGTGTTTGTACTGGCATTCATTGCTGCGGCCGCAGTCGTCGCAGGCTGGGT CTGGCTCAACAATGAAATGACCCGGCCTGGTCCTTTGCAGCAAGAAGTCGTCTTCATGGTTTCCGAGGGCGATACGTTGA CCGCTGTTGCCGGGCGGCTGGAAGCGGAAGGCATCATCAAGGATGACCGCATCCTTCTGCTGAAAAGCCGGATCGACGAA GAAATGCAGAGCGAGATCCCGCACGTGAAGGCGGGGGAATATATTCTTGATCCTGCCATCAGCATGGCTGCTGTGCTCGC CATTCTAACTGAGGGCCGCTCGGTTCTCCACAAGATCACTCTGCCTGAAGGCCGAACGACCGCGCAGCTTCTCCGCATCA TCGAAACCGATGAAACACTGGAAGGCGAGATGCCCGAAGTGTTGCCGGAAGAAGGCACGCTGCTCCCCGACACCTACATG TTCCATCGCGGCATGACACGCCAGGCGCTGATCGAGAAGGTTCAGAAGGCGCAGGCCGATGTGCTGGCGGAACTCTGGCC GGAGCGGCAGGAGGGCCTCCTGCTCGAAACACCCTATGAGGCGGTTATCCTGGCGTCCATCGTCGAGAAGGAAAGCGGCA TTGCCGCAGAGCGAGACGAGATCGCCGCCCTGTTCACGACGCGGATGAAGCGGGGTATGCGCCTTCAGAGCGACCCGACA ATCATCTACGGCATTTCCAAAGGTGAGCCGCTCTATAACAAGCAAGGCCAGCGCCGGACGCTCTATCGCTCCGAAATTGA TCGGCCTACGGAATGGAACACATATCAGATCGATGGTTTGCCAAAGACGCCGATCTGCAACCCAGGTCGTGAAGCCATTG CAGCGGTTCTGAACCCTCCGGAAACGGAATATATTTTCTTTGTCGCAGATGGGAAAGGCGGGCACCTCTTCGCCAAGACC CTGGCGGAACACAATCGCAATGTTGCGGCCTACCGCGCTTACGAGCGCGGCGAAATTGAACGGGAGCGGGCAAACTGA
Upstream 100 bases:
>100_bases GACATATCGTTTATTGCCTGATCCGGCTGCGGAGTATGCTTTTCTGTAGTCGCCTGACCGGGTTACAACTCCGCGCTGGG ACACGTAGCGAGAGGTTTGC
Downstream 100 bases:
>100_bases TGGGTACACTGTCGGGGATGACGGGGTTCGCGCGGGTAACCGGCGAAGCCAGCTGGGGCGGGTGGGCCTGGGAGGCCAAA AGCGTCAATGGCCGCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MGFLRTLFAWVFVLAFIAAAAVVAGWVWLNNEMTRPGPLQQEVVFMVSEGDTLTAVAGRLEAEGIIKDDRILLLKSRIDE EMQSEIPHVKAGEYILDPAISMAAVLAILTEGRSVLHKITLPEGRTTAQLLRIIETDETLEGEMPEVLPEEGTLLPDTYM FHRGMTRQALIEKVQKAQADVLAELWPERQEGLLLETPYEAVILASIVEKESGIAAERDEIAALFTTRMKRGMRLQSDPT IIYGISKGEPLYNKQGQRRTLYRSEIDRPTEWNTYQIDGLPKTPICNPGREAIAAVLNPPETEYIFFVADGKGGHLFAKT LAEHNRNVAAYRAYERGEIERERAN
Sequences:
>Translated_345_residues MGFLRTLFAWVFVLAFIAAAAVVAGWVWLNNEMTRPGPLQQEVVFMVSEGDTLTAVAGRLEAEGIIKDDRILLLKSRIDE EMQSEIPHVKAGEYILDPAISMAAVLAILTEGRSVLHKITLPEGRTTAQLLRIIETDETLEGEMPEVLPEEGTLLPDTYM FHRGMTRQALIEKVQKAQADVLAELWPERQEGLLLETPYEAVILASIVEKESGIAAERDEIAALFTTRMKRGMRLQSDPT IIYGISKGEPLYNKQGQRRTLYRSEIDRPTEWNTYQIDGLPKTPICNPGREAIAAVLNPPETEYIFFVADGKGGHLFAKT LAEHNRNVAAYRAYERGEIERERAN >Mature_344_residues GFLRTLFAWVFVLAFIAAAAVVAGWVWLNNEMTRPGPLQQEVVFMVSEGDTLTAVAGRLEAEGIIKDDRILLLKSRIDEE MQSEIPHVKAGEYILDPAISMAAVLAILTEGRSVLHKITLPEGRTTAQLLRIIETDETLEGEMPEVLPEEGTLLPDTYMF HRGMTRQALIEKVQKAQADVLAELWPERQEGLLLETPYEAVILASIVEKESGIAAERDEIAALFTTRMKRGMRLQSDPTI IYGISKGEPLYNKQGQRRTLYRSEIDRPTEWNTYQIDGLPKTPICNPGREAIAAVLNPPETEYIFFVADGKGGHLFAKTL AEHNRNVAAYRAYERGEIERERAN
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=309, Percent_Identity=34.3042071197411, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38692; Mature: 38561
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLRTLFAWVFVLAFIAAAAVVAGWVWLNNEMTRPGPLQQEVVFMVSEGDTLTAVAGRL CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCEEEHHHHHH EAEGIIKDDRILLLKSRIDEEMQSEIPHVKAGEYILDPAISMAAVLAILTEGRSVLHKIT CCCCCCCCCCEEEEHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEE LPEGRTTAQLLRIIETDETLEGEMPEVLPEEGTLLPDTYMFHRGMTRQALIEKVQKAQAD CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH VLAELWPERQEGLLLETPYEAVILASIVEKESGIAAERDEIAALFTTRMKRGMRLQSDPT HHHHHCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCE IIYGISKGEPLYNKQGQRRTLYRSEIDRPTEWNTYQIDGLPKTPICNPGREAIAAVLNPP EEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC ETEYIFFVADGKGGHLFAKTLAEHNRNVAAYRAYERGEIERERAN CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHCCCCHHHCCC >Mature Secondary Structure GFLRTLFAWVFVLAFIAAAAVVAGWVWLNNEMTRPGPLQQEVVFMVSEGDTLTAVAGRL CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCEEEHHHHHH EAEGIIKDDRILLLKSRIDEEMQSEIPHVKAGEYILDPAISMAAVLAILTEGRSVLHKIT CCCCCCCCCCEEEEHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEE LPEGRTTAQLLRIIETDETLEGEMPEVLPEEGTLLPDTYMFHRGMTRQALIEKVQKAQAD CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH VLAELWPERQEGLLLETPYEAVILASIVEKESGIAAERDEIAALFTTRMKRGMRLQSDPT HHHHHCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCE IIYGISKGEPLYNKQGQRRTLYRSEIDRPTEWNTYQIDGLPKTPICNPGREAIAAVLNPP EEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC ETEYIFFVADGKGGHLFAKTLAEHNRNVAAYRAYERGEIERERAN CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]