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The map label for this gene is recJ [H]

Identifier: 114797921

GI number: 114797921

Start: 2036206

End: 2037999

Strand: Reverse

Name: recJ [H]

Synonym: HNE_1968

Alternate gene names: 114797921

Gene position: 2037999-2036206 (Counterclockwise)

Preceding gene: 114797424

Following gene: 114798263

Centisome position: 55.01

GC content: 63.88

Gene sequence:

>1794_bases
ATGTCCCAGCCCGCCACAGTTCAAGCCGCGCCATTTCTGGGTGTGGAACGCTCCGCCGGTGGGCGCCGCTGGCGGCTGGC
CGATGTGGACGAAACGATGGTACGGCGCCTGATGCCGGCGGCTGCGGGGTCGGATCTTGTTGCGCGGCTGCTTGCCGGGC
GGGGTGTTACACCAGAGACGGCGCCCAGCTATCTGGCACCTACCCTGCGAGACCTTTTTCCCGATCCGAGCCTCTTTGCG
GACATGGACAAGGCGGCAGGCATCATTCTCGACGCCATTGTTGCCGGAAAACGTGTCTGCGTGTTTGCAGATTACGATGT
CGACGGCGGCACATCTTCAGCCATACTCGCGCGCTACTTCCGCGCCTGGGGCAGGGAGCTGGGGCTTTATGTGCCAGACC
GCCTTGAGGAAGGTTATGGCCCGTCGCCCGAGGCATTCAGGTGGCTCAAGGCCCAGGGCTATGACCTTGTGATTACCGTC
GATTGCGGCGCAGCAGCGGTCAGGGCCCTCGACGAAGCGGTGTCGATAGATCTGCCGGTTGTCGTGCTGGACCATCACCT
GATGTCGGGCCACCTGCCGGAAACGGCGGCGCTAGTGAATCCCAACCGTCCGGACTGCACATCGGGGCAGGGCCACCTTG
CGGCGGCGGGCGTGGTGTTCGTCTTTGCGGCGGCCATGAACCGCCTGGCGCGGCAGCGGAATATCGCCCCGCCGGCGGGC
TTGCCGGATATTCTGCCCTATCTGGATCTCTGCGCTCTCGGCACGCTGTGCGACATGTCTCCGCTGACCGGCGTCAACCG
GGCATTTGTGCGCCAGGGCCTCACGATCATGTCTCGCGGCGAGAATGTCGGGCTAAGGGCGCTGGCAGATGTGAGCGGGA
TCGGTGAGATCGACAGCGTCTATCATGCGACGTTCCTGCTGGGGCCGCGATTGAATGCCGGGGGACGGGTGGGTGATCCA
TGGCTGGCGGCGAAGCTGCTGGCAACGGATGACCGGGGCGAGGCGATTGCGCTCGCAGAGCGTTTGCATACCCTCAACGA
CGAGCGCCGCGCTGTGGAAGCAGCCATTCAGGACGAGGCAACGGCGCAGGCTGAGCGGGCGCTGGCAGCCAATCCGGATC
GCGGCATTATCATTGCGGCAGGTGAAGGGTGGCACCCCGGTGTGATCGGTATTGTGGCCGGCCGCCTGAAGGACCGGTTC
CATTTACCTACAATCATCATCGGATGGGGCGAAGGCCTTGGACCGGTGGCCAAAGGCTCTGGCCGCTCTGTGACGGGTGT
AAATCTGGGCGATGCAATCTCTGCTGCGGCAAGAGAAGGGATCATCCTTTCCGGAGGTGGCCATGCCATGGCGGGCGGTC
TCAGCCTTGAGCCGCATCAGATCGCAGCGTTTGACGACTGGATGGTCGCGCATATGGCGCAATTCACAGCCGAGCGGGAC
GCGGCGCTGGACCTGCATATCGACGCCGTTCTTTCACCCGGCAGTGCCACGACCGATCTCTACGATCTGATTGCGGCGCT
TGGCCCATTTGGCATGGGCGCGCCAGAGCCCGTCTTTGCAATGACGGATGTAATGCCGACGGGCGTCCGCCGCATCGGTG
CCAACCACCTGCGCTTCACGGCGGAGAATAATACGGGACGGATCGAGTGCATTGCCTGGCGTGTGGCGGACGAGCCTATG
GGCGATCTTCTGCGCACGGGGCAGCGTGTCGGCCTCGCCGGACGCCTCAAGTCTGACCAGTGGAATGGCCGGCGCCGGGT
GCAACTTGAAATCCTGGATGCAGCAATGCTGTGA

Upstream 100 bases:

>100_bases
GGCCGGTTGGCACAATTTCGCCACCCCTGTGCAGCGATCGATTTCACGTGCGCGCTGGTTGGGTTTAGTCTGGGCAACTG
ATTCTCTCGAAGGTCATAAA

Downstream 100 bases:

>100_bases
ATCTTCTGCAAAACAGCGTTGGAAACGGGTTGCGGTGTTAGAATTCACCCGCTATATGCCCGGTTCTCAAGCCGGTGCGG
TCCCTTCGTCTATCGGTTAG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MSQPATVQAAPFLGVERSAGGRRWRLADVDETMVRRLMPAAAGSDLVARLLAGRGVTPETAPSYLAPTLRDLFPDPSLFA
DMDKAAGIILDAIVAGKRVCVFADYDVDGGTSSAILARYFRAWGRELGLYVPDRLEEGYGPSPEAFRWLKAQGYDLVITV
DCGAAAVRALDEAVSIDLPVVVLDHHLMSGHLPETAALVNPNRPDCTSGQGHLAAAGVVFVFAAAMNRLARQRNIAPPAG
LPDILPYLDLCALGTLCDMSPLTGVNRAFVRQGLTIMSRGENVGLRALADVSGIGEIDSVYHATFLLGPRLNAGGRVGDP
WLAAKLLATDDRGEAIALAERLHTLNDERRAVEAAIQDEATAQAERALAANPDRGIIIAAGEGWHPGVIGIVAGRLKDRF
HLPTIIIGWGEGLGPVAKGSGRSVTGVNLGDAISAAAREGIILSGGGHAMAGGLSLEPHQIAAFDDWMVAHMAQFTAERD
AALDLHIDAVLSPGSATTDLYDLIAALGPFGMGAPEPVFAMTDVMPTGVRRIGANHLRFTAENNTGRIECIAWRVADEPM
GDLLRTGQRVGLAGRLKSDQWNGRRRVQLEILDAAML

Sequences:

>Translated_597_residues
MSQPATVQAAPFLGVERSAGGRRWRLADVDETMVRRLMPAAAGSDLVARLLAGRGVTPETAPSYLAPTLRDLFPDPSLFA
DMDKAAGIILDAIVAGKRVCVFADYDVDGGTSSAILARYFRAWGRELGLYVPDRLEEGYGPSPEAFRWLKAQGYDLVITV
DCGAAAVRALDEAVSIDLPVVVLDHHLMSGHLPETAALVNPNRPDCTSGQGHLAAAGVVFVFAAAMNRLARQRNIAPPAG
LPDILPYLDLCALGTLCDMSPLTGVNRAFVRQGLTIMSRGENVGLRALADVSGIGEIDSVYHATFLLGPRLNAGGRVGDP
WLAAKLLATDDRGEAIALAERLHTLNDERRAVEAAIQDEATAQAERALAANPDRGIIIAAGEGWHPGVIGIVAGRLKDRF
HLPTIIIGWGEGLGPVAKGSGRSVTGVNLGDAISAAAREGIILSGGGHAMAGGLSLEPHQIAAFDDWMVAHMAQFTAERD
AALDLHIDAVLSPGSATTDLYDLIAALGPFGMGAPEPVFAMTDVMPTGVRRIGANHLRFTAENNTGRIECIAWRVADEPM
GDLLRTGQRVGLAGRLKSDQWNGRRRVQLEILDAAML
>Mature_596_residues
SQPATVQAAPFLGVERSAGGRRWRLADVDETMVRRLMPAAAGSDLVARLLAGRGVTPETAPSYLAPTLRDLFPDPSLFAD
MDKAAGIILDAIVAGKRVCVFADYDVDGGTSSAILARYFRAWGRELGLYVPDRLEEGYGPSPEAFRWLKAQGYDLVITVD
CGAAAVRALDEAVSIDLPVVVLDHHLMSGHLPETAALVNPNRPDCTSGQGHLAAAGVVFVFAAAMNRLARQRNIAPPAGL
PDILPYLDLCALGTLCDMSPLTGVNRAFVRQGLTIMSRGENVGLRALADVSGIGEIDSVYHATFLLGPRLNAGGRVGDPW
LAAKLLATDDRGEAIALAERLHTLNDERRAVEAAIQDEATAQAERALAANPDRGIIIAAGEGWHPGVIGIVAGRLKDRFH
LPTIIIGWGEGLGPVAKGSGRSVTGVNLGDAISAAAREGIILSGGGHAMAGGLSLEPHQIAAFDDWMVAHMAQFTAERDA
ALDLHIDAVLSPGSATTDLYDLIAALGPFGMGAPEPVFAMTDVMPTGVRRIGANHLRFTAENNTGRIECIAWRVADEPMG
DLLRTGQRVGLAGRLKSDQWNGRRRVQLEILDAAML

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=564, Percent_Identity=34.5744680851064, Blast_Score=253, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63193; Mature: 63062

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPATVQAAPFLGVERSAGGRRWRLADVDETMVRRLMPAAAGSDLVARLLAGRGVTPET
CCCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
APSYLAPTLRDLFPDPSLFADMDKAAGIILDAIVAGKRVCVFADYDVDGGTSSAILARYF
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
RAWGRELGLYVPDRLEEGYGPSPEAFRWLKAQGYDLVITVDCGAAAVRALDEAVSIDLPV
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCE
VVLDHHLMSGHLPETAALVNPNRPDCTSGQGHLAAAGVVFVFAAAMNRLARQRNIAPPAG
EEECCHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPDILPYLDLCALGTLCDMSPLTGVNRAFVRQGLTIMSRGENVGLRALADVSGIGEIDSV
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEECCCCCCCCHHHH
YHATFLLGPRLNAGGRVGDPWLAAKLLATDDRGEAIALAERLHTLNDERRAVEAAIQDEA
HHHHEEECCCCCCCCCCCCHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
TAQAERALAANPDRGIIIAAGEGWHPGVIGIVAGRLKDRFHLPTIIIGWGEGLGPVAKGS
HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC
GRSVTGVNLGDAISAAAREGIILSGGGHAMAGGLSLEPHQIAAFDDWMVAHMAQFTAERD
CCEEECCCCCHHHHHHHHCCEEEECCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCC
AALDLHIDAVLSPGSATTDLYDLIAALGPFGMGAPEPVFAMTDVMPTGVRRIGANHLRFT
CEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEE
AENNTGRIECIAWRVADEPMGDLLRTGQRVGLAGRLKSDQWNGRRRVQLEILDAAML
ECCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEECHHCC
>Mature Secondary Structure 
SQPATVQAAPFLGVERSAGGRRWRLADVDETMVRRLMPAAAGSDLVARLLAGRGVTPET
CCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
APSYLAPTLRDLFPDPSLFADMDKAAGIILDAIVAGKRVCVFADYDVDGGTSSAILARYF
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
RAWGRELGLYVPDRLEEGYGPSPEAFRWLKAQGYDLVITVDCGAAAVRALDEAVSIDLPV
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCE
VVLDHHLMSGHLPETAALVNPNRPDCTSGQGHLAAAGVVFVFAAAMNRLARQRNIAPPAG
EEECCHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPDILPYLDLCALGTLCDMSPLTGVNRAFVRQGLTIMSRGENVGLRALADVSGIGEIDSV
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEECCCCCCCCHHHH
YHATFLLGPRLNAGGRVGDPWLAAKLLATDDRGEAIALAERLHTLNDERRAVEAAIQDEA
HHHHEEECCCCCCCCCCCCHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
TAQAERALAANPDRGIIIAAGEGWHPGVIGIVAGRLKDRFHLPTIIIGWGEGLGPVAKGS
HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC
GRSVTGVNLGDAISAAAREGIILSGGGHAMAGGLSLEPHQIAAFDDWMVAHMAQFTAERD
CCEEECCCCCHHHHHHHHCCEEEECCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCC
AALDLHIDAVLSPGSATTDLYDLIAALGPFGMGAPEPVFAMTDVMPTGVRRIGANHLRFT
CEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEE
AENNTGRIECIAWRVADEPMGDLLRTGQRVGLAGRLKSDQWNGRRRVQLEILDAAML
ECCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEECHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]