| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is add [H]
Identifier: 114797828
GI number: 114797828
Start: 2006154
End: 2007167
Strand: Direct
Name: add [H]
Synonym: HNE_1938
Alternate gene names: 114797828
Gene position: 2006154-2007167 (Clockwise)
Preceding gene: 114800222
Following gene: 114798369
Centisome position: 54.15
GC content: 58.97
Gene sequence:
>1014_bases ATGAAAGCGCCCGGCAGCCAGACGGACCTGATCCGCCGCCTGCCCAAGGCCGAACTTCACCTGCACATCGAAGGCAGCTT CGAACCAGAACAGATGATGGCGCTGGCAGAGCGCAACAAGATCGTCCTGCCTTTCAAGACGCTGGAAGACGCAAAAGCGG CTTACGCTTTCTCCAACCTCCAGGAATTTCTCGACCTCTACTATCAGGGCATGCAGGTGCTGCGCACCGAGGAAGACTTC TTCGACCTGACCTGGGCGTATCTCCAGCGGGCCAAGGCCGACAATGTCCGCCATGTGGAGATGTTCTACGATCCCCAGGC CCATACCGAGCGGGGCGTGCCCTTCGGCGTGGTCACGGACGGCATCCTCGCCGCCATCAAGAAGGGTGAGCAGGAACTCG GCATCACTTCCTACCTCATCATGAGTTTCCTGCGCCATCTTTCGGAAGAGGACGGCTTTGACCTGCTGGTCGAGTCCGAG CCTTGGCATGACAAGTTTATCGGCGTCGGCCTCGACTCCTCAGAAATGGGCCACCCGCCCCTGAAGTTCGAGCGGCTCTA TCAGCGCTGCCGCGAAATCGGCTTCAAGCTGAGCATGCATGCCGGCGAAGAAGGCCCGCCGTCCTACGTTCGCGAAGCCC TGCTCGACATCGGCGTCGACCGGATCGACCACGGCAACCGCTGTATGGAAGACCCCGAACTCGTCAGTATCCTCCGCGAA ATGCAGGTGCCGCTGACCAACTGCCCGCTGTCGAACCTGTCGCTCTGCGTCATTGATGATCTGAAAAAAAGCCCCGTCAA AGCGCAGCTCGAACAAGGTCTCTTGGTCACAGTCAATTCTGACGACCCGGCCTATTTCGGCGGCTATATCGGCCGCAATT ACGAGCAAACCGCAGCGGCGCTTGATCTGTCAGACAGTCAGCTTATCCAGCTCGCCCGTAATAGCTTCACAGCCAGTTTT CTTCTCGATGCAGACAAACAGCGTCACCTGGCTGAAGTAGACGCGGCCGCCTGA
Upstream 100 bases:
>100_bases GCCGCGTCCTCGGCATGATGCCCCACCCGGAACGCGCTATCGGCAACCATGAAGGCGGCAGCGACGGCGCGGCACTCTTC AAAAGCCTGATGGCGGCGGC
Downstream 100 bases:
>100_bases AATACAGACGGCCGCTTTCTTACTGCGTCAGCTATTGGTTTCGGCCTCTTCAGCCGCGTCTTCTGAATCGGCCTCAGCCT CTTCATCCGGGGCTTCAGCC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKAPGSQTDLIRRLPKAELHLHIEGSFEPEQMMALAERNKIVLPFKTLEDAKAAYAFSNLQEFLDLYYQGMQVLRTEEDF FDLTWAYLQRAKADNVRHVEMFYDPQAHTERGVPFGVVTDGILAAIKKGEQELGITSYLIMSFLRHLSEEDGFDLLVESE PWHDKFIGVGLDSSEMGHPPLKFERLYQRCREIGFKLSMHAGEEGPPSYVREALLDIGVDRIDHGNRCMEDPELVSILRE MQVPLTNCPLSNLSLCVIDDLKKSPVKAQLEQGLLVTVNSDDPAYFGGYIGRNYEQTAAALDLSDSQLIQLARNSFTASF LLDADKQRHLAEVDAAA
Sequences:
>Translated_337_residues MKAPGSQTDLIRRLPKAELHLHIEGSFEPEQMMALAERNKIVLPFKTLEDAKAAYAFSNLQEFLDLYYQGMQVLRTEEDF FDLTWAYLQRAKADNVRHVEMFYDPQAHTERGVPFGVVTDGILAAIKKGEQELGITSYLIMSFLRHLSEEDGFDLLVESE PWHDKFIGVGLDSSEMGHPPLKFERLYQRCREIGFKLSMHAGEEGPPSYVREALLDIGVDRIDHGNRCMEDPELVSILRE MQVPLTNCPLSNLSLCVIDDLKKSPVKAQLEQGLLVTVNSDDPAYFGGYIGRNYEQTAAALDLSDSQLIQLARNSFTASF LLDADKQRHLAEVDAAA >Mature_337_residues MKAPGSQTDLIRRLPKAELHLHIEGSFEPEQMMALAERNKIVLPFKTLEDAKAAYAFSNLQEFLDLYYQGMQVLRTEEDF FDLTWAYLQRAKADNVRHVEMFYDPQAHTERGVPFGVVTDGILAAIKKGEQELGITSYLIMSFLRHLSEEDGFDLLVESE PWHDKFIGVGLDSSEMGHPPLKFERLYQRCREIGFKLSMHAGEEGPPSYVREALLDIGVDRIDHGNRCMEDPELVSILRE MQVPLTNCPLSNLSLCVIDDLKKSPVKAQLEQGLLVTVNSDDPAYFGGYIGRNYEQTAAALDLSDSQLIQLARNSFTASF LLDADKQRHLAEVDAAA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=343, Percent_Identity=23.6151603498542, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI1787910, Length=331, Percent_Identity=27.190332326284, Blast_Score=134, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17538512, Length=355, Percent_Identity=24.7887323943662, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32565969, Length=340, Percent_Identity=24.7058823529412, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6324188, Length=336, Percent_Identity=41.3690476190476, Blast_Score=243, Evalue=3e-65, Organism=Drosophila melanogaster, GI24645260, Length=325, Percent_Identity=26.7692307692308, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 38013; Mature: 38013
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPGSQTDLIRRLPKAELHLHIEGSFEPEQMMALAERNKIVLPFKTLEDAKAAYAFSNL CCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH QEFLDLYYQGMQVLRTEEDFFDLTWAYLQRAKADNVRHVEMFYDPQAHTERGVPFGVVTD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHH GILAAIKKGEQELGITSYLIMSFLRHLSEEDGFDLLVESEPWHDKFIGVGLDSSEMGHPP HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCC LKFERLYQRCREIGFKLSMHAGEEGPPSYVREALLDIGVDRIDHGNRCMEDPELVSILRE HHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH MQVPLTNCPLSNLSLCVIDDLKKSPVKAQLEQGLLVTVNSDDPAYFGGYIGRNYEQTAAA HCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCEEEEECCCCCCCCCHHHCCCHHHHHHH LDLSDSQLIQLARNSFTASFLLDADKQRHLAEVDAAA HCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCC >Mature Secondary Structure MKAPGSQTDLIRRLPKAELHLHIEGSFEPEQMMALAERNKIVLPFKTLEDAKAAYAFSNL CCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH QEFLDLYYQGMQVLRTEEDFFDLTWAYLQRAKADNVRHVEMFYDPQAHTERGVPFGVVTD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHH GILAAIKKGEQELGITSYLIMSFLRHLSEEDGFDLLVESEPWHDKFIGVGLDSSEMGHPP HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCC LKFERLYQRCREIGFKLSMHAGEEGPPSYVREALLDIGVDRIDHGNRCMEDPELVSILRE HHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH MQVPLTNCPLSNLSLCVIDDLKKSPVKAQLEQGLLVTVNSDDPAYFGGYIGRNYEQTAAA HCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCEEEEECCCCCCCCCHHHCCCHHHHHHH LDLSDSQLIQLARNSFTASFLLDADKQRHLAEVDAAA HCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA