| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798369
Identifier: 114798369
GI number: 114798369
Start: 2009156
End: 2010769
Strand: Direct
Name: 114798369
Synonym: HNE_1941
Alternate gene names: NA
Gene position: 2009156-2010769 (Clockwise)
Preceding gene: 114797828
Following gene: 114797329
Centisome position: 54.23
GC content: 62.7
Gene sequence:
>1614_bases ATGCCGCCCGCCAACCTTGGTGTCAGGACTGGCAAGGGTAATTTGCGCATCTGCCCGAACTCAACGCATTGTGCCCTATG GCGATATTCGCCTTTCGAGGCTAAACGGCACCCTATGACAGACGCTCGCCAGCAAGAACTCCTGACCACCGCTTCCCGCC TGCGCGCCGAGGGGCGGGTTCCTGAAGCCATTACAGCCTATCAGGCGCTTCTGAGCGCCTATCCCGCCTTGCCTGACAGC TGGTACAATCTGGGTTGGCTGCTCCGTCAGGCAGGACGCGGGCAAGAGGCTCTGGCCGCCTATGATGAGGCCCTCAGCCA GGGCGTCAAAGGGGCCGAAGAAATTCACCTCAACCGCGCCGCCATCTTCTCCGATTTGCTGGCCCGGCCGGACGACGCCA AGGCGGAACTTCTCAAAGCCGTAGCGGCAAACCCGTCCTACGCCGCCGCCTATCTGAACCTCGGTAACCTGCACGAAGAC CTGGGCGAGCGGGCAGAGGCGAAAGCCGCGTATGACAAGGCCCACGCCATCAATCCCGGCAGCGCCGTCATCCTCTCCCG CCTGGCCGGCCTGGGGAAAGCCACCTCCCTGGACGATCCGATGATTGCCAAGCTGCGCGCCTTGATTGCCGGCGGCACGC TGTTTCCCGCCGATCTGGCCGTCGCTCACTACGCACTTGGCCGCCTCTATGACAGCTGCGGCGCCTATGACGCGGCGGCG CAGTCTTTTGCAGCGGCGAATGCCGGCGCGCGCATTGCGGCGGGGGGCGGCGTTGCGCCGTATGAGCTGAAAGCCGACCT CTACCGCGCCGATCAGACCGGCCGCGCCTTCGTCAGCCTTCGGGAAGCCAAAAGCGGCATAACAGAACCAGACCCGCAGC CGGTGTTTATCCTCGGCATGTTCCGCTCCGGCTCTACGCTCGTGGAACAGATCATCGGCGCCCATTCCAAAGTTACCCCG GCAGGTGAGCTGGGCCTGATCCAGACAATCTATCGCAATCTCGGCGGCACACCGGCGCGGGTGGCCGCGGCGCCGGAATC CACCATCCAGCAATATGCCGAAGCCTATCTGAAACATCTCCGCACGCTGCATCCCGGTGCAAGCGTGGTGACAGACAAGC ATCCGGAGAATTTCTGGCAAATCGGCCTCATCCGCCGGATGTTCCCGAATGCCAGGATCATCAACACCGTGCGCGAGCCG CTGGACAATCTGATCTCGGTCTGGGGCCTGCACCTCGACAATTCCCAGAATTACGGCTTTACGCCGCAGGACATCGCCAG CCGCATTCATGCCGAACGGCGCATGATGATCCATTGGAACCGGATTTATCCGGGCACCATCCTGTCTGTGAAATACGAAG ACGTGATCCGCCAGCCCGAGCAGGAAGTGCGCCGCGTGCTGGATTTCCTGGGCTTGCCCTTTGAACCGGCCTGCCTCGAA TTCCACAAGGCCAGCGGCCCGGTCAAGACAGCCTCCGTCTGGCAGGTCCGCGAAGCGCTGCACGATCGTTCGATCGGCCG CTGGAAGCATTATGAAACCTACCTGCGTTCCCTGCCCTCGCATGCTGCGCTGGATGCGTTGCTGGCAGTTGAACAGCCGG GCAAACCGGCCTAG
Upstream 100 bases:
>100_bases GCGGTGAGCGCGCTGGCCCCGAGGCCAAGAAGAACAGATCGGCGGGCAAGCTCAGGCATCGGTCAGCACTCCAAATGAAG CTCCTGTCTAGCCGCCCCCG
Downstream 100 bases:
>100_bases CGCTGCGCCAAATCTCAAACACGGGCTGATGTGATGACCGATACTGCCGCCATTCTCTCCCATCTCACAGCCGAGCAGGA CGCCGCCTCCGGTGTCGGGC
Product: TPR/sulfotransferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MPPANLGVRTGKGNLRICPNSTHCALWRYSPFEAKRHPMTDARQQELLTTASRLRAEGRVPEAITAYQALLSAYPALPDS WYNLGWLLRQAGRGQEALAAYDEALSQGVKGAEEIHLNRAAIFSDLLARPDDAKAELLKAVAANPSYAAAYLNLGNLHED LGERAEAKAAYDKAHAINPGSAVILSRLAGLGKATSLDDPMIAKLRALIAGGTLFPADLAVAHYALGRLYDSCGAYDAAA QSFAAANAGARIAAGGGVAPYELKADLYRADQTGRAFVSLREAKSGITEPDPQPVFILGMFRSGSTLVEQIIGAHSKVTP AGELGLIQTIYRNLGGTPARVAAAPESTIQQYAEAYLKHLRTLHPGASVVTDKHPENFWQIGLIRRMFPNARIINTVREP LDNLISVWGLHLDNSQNYGFTPQDIASRIHAERRMMIHWNRIYPGTILSVKYEDVIRQPEQEVRRVLDFLGLPFEPACLE FHKASGPVKTASVWQVREALHDRSIGRWKHYETYLRSLPSHAALDALLAVEQPGKPA
Sequences:
>Translated_537_residues MPPANLGVRTGKGNLRICPNSTHCALWRYSPFEAKRHPMTDARQQELLTTASRLRAEGRVPEAITAYQALLSAYPALPDS WYNLGWLLRQAGRGQEALAAYDEALSQGVKGAEEIHLNRAAIFSDLLARPDDAKAELLKAVAANPSYAAAYLNLGNLHED LGERAEAKAAYDKAHAINPGSAVILSRLAGLGKATSLDDPMIAKLRALIAGGTLFPADLAVAHYALGRLYDSCGAYDAAA QSFAAANAGARIAAGGGVAPYELKADLYRADQTGRAFVSLREAKSGITEPDPQPVFILGMFRSGSTLVEQIIGAHSKVTP AGELGLIQTIYRNLGGTPARVAAAPESTIQQYAEAYLKHLRTLHPGASVVTDKHPENFWQIGLIRRMFPNARIINTVREP LDNLISVWGLHLDNSQNYGFTPQDIASRIHAERRMMIHWNRIYPGTILSVKYEDVIRQPEQEVRRVLDFLGLPFEPACLE FHKASGPVKTASVWQVREALHDRSIGRWKHYETYLRSLPSHAALDALLAVEQPGKPA >Mature_536_residues PPANLGVRTGKGNLRICPNSTHCALWRYSPFEAKRHPMTDARQQELLTTASRLRAEGRVPEAITAYQALLSAYPALPDSW YNLGWLLRQAGRGQEALAAYDEALSQGVKGAEEIHLNRAAIFSDLLARPDDAKAELLKAVAANPSYAAAYLNLGNLHEDL GERAEAKAAYDKAHAINPGSAVILSRLAGLGKATSLDDPMIAKLRALIAGGTLFPADLAVAHYALGRLYDSCGAYDAAAQ SFAAANAGARIAAGGGVAPYELKADLYRADQTGRAFVSLREAKSGITEPDPQPVFILGMFRSGSTLVEQIIGAHSKVTPA GELGLIQTIYRNLGGTPARVAAAPESTIQQYAEAYLKHLRTLHPGASVVTDKHPENFWQIGLIRRMFPNARIINTVREPL DNLISVWGLHLDNSQNYGFTPQDIASRIHAERRMMIHWNRIYPGTILSVKYEDVIRQPEQEVRRVLDFLGLPFEPACLEF HKASGPVKTASVWQVREALHDRSIGRWKHYETYLRSLPSHAALDALLAVEQPGKPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 58620; Mature: 58489
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPANLGVRTGKGNLRICPNSTHCALWRYSPFEAKRHPMTDARQQELLTTASRLRAEGRV CCCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PEAITAYQALLSAYPALPDSWYNLGWLLRQAGRGQEALAAYDEALSQGVKGAEEIHLNRA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AIFSDLLARPDDAKAELLKAVAANPSYAAAYLNLGNLHEDLGERAEAKAAYDKAHAINPG HHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SAVILSRLAGLGKATSLDDPMIAKLRALIAGGTLFPADLAVAHYALGRLYDSCGAYDAAA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH QSFAAANAGARIAAGGGVAPYELKADLYRADQTGRAFVSLREAKSGITEPDPQPVFILGM HHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE FRSGSTLVEQIIGAHSKVTPAGELGLIQTIYRNLGGTPARVAAAPESTIQQYAEAYLKHL ECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH RTLHPGASVVTDKHPENFWQIGLIRRMFPNARIINTVREPLDNLISVWGLHLDNSQNYGF HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEECCCCCCCC TPQDIASRIHAERRMMIHWNRIYPGTILSVKYEDVIRQPEQEVRRVLDFLGLPFEPACLE CHHHHHHHHHHHHHEEEEEEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHH FHKASGPVKTASVWQVREALHDRSIGRWKHYETYLRSLPSHAALDALLAVEQPGKPA HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure PPANLGVRTGKGNLRICPNSTHCALWRYSPFEAKRHPMTDARQQELLTTASRLRAEGRV CCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PEAITAYQALLSAYPALPDSWYNLGWLLRQAGRGQEALAAYDEALSQGVKGAEEIHLNRA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AIFSDLLARPDDAKAELLKAVAANPSYAAAYLNLGNLHEDLGERAEAKAAYDKAHAINPG HHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SAVILSRLAGLGKATSLDDPMIAKLRALIAGGTLFPADLAVAHYALGRLYDSCGAYDAAA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH QSFAAANAGARIAAGGGVAPYELKADLYRADQTGRAFVSLREAKSGITEPDPQPVFILGM HHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE FRSGSTLVEQIIGAHSKVTPAGELGLIQTIYRNLGGTPARVAAAPESTIQQYAEAYLKHL ECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH RTLHPGASVVTDKHPENFWQIGLIRRMFPNARIINTVREPLDNLISVWGLHLDNSQNYGF HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEECCCCCCCC TPQDIASRIHAERRMMIHWNRIYPGTILSVKYEDVIRQPEQEVRRVLDFLGLPFEPACLE CHHHHHHHHHHHHHEEEEEEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHH FHKASGPVKTASVWQVREALHDRSIGRWKHYETYLRSLPSHAALDALLAVEQPGKPA HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]