| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is exoM [H]
Identifier: 114797562
GI number: 114797562
Start: 2165979
End: 2166911
Strand: Reverse
Name: exoM [H]
Synonym: HNE_2092
Alternate gene names: 114797562
Gene position: 2166911-2165979 (Counterclockwise)
Preceding gene: 114798530
Following gene: 114797324
Centisome position: 58.49
GC content: 61.63
Gene sequence:
>933_bases TTGCAGATCCTCGTCGCCGCGCCGACCTATCGCCGCAATGAGATGCTGGACGGCCTGCTGAAAAGCCTGTCGGAGCTGGC CCTGCCGGAGAATGCTGACGTCCGCTTTGTCATCATAGATAACGACCGCACGGGGAGTGCCCGACCGGTTGTTGAAAAAT GGCAACAGACCTTTCCTGCGCCACTCGCCTACCAACTCGAGGAGGCCCCCGGCGTGACGCATGTGCGCAATCGCGCGCTG CAGCTTGCCGGTGACGCAGACCTTCTCGCCTTCATTGATGACGATGAATTTGCCCACCCTGCCTGGCTCGCTGCGCTCGT GCGGCGGTATCGTGAAACCGGCGCCGCGGGTGTCTTTGGCCCCGTCCAGTCCGTCTATCCCCACACGGCCCCGGCCTGGA TGAAGGAATGGGGCGTTCACGGAACACCGATCACGGAAGACCGGGATCAGACCAAGCCAGGCGCCACCTGCAACTGCCTC ATCGACATGGCCACCGTGCGCAAGGAAGCTATGAGCTTCGATCCCCGCATGTCTCTCACCGGCGCCGAGGATACGCTCTT TTTCACGCAGCTTCTCGATCGTGGCCACCGCTTGACCCAAGCGAAAGACGCCCTCGTCTATGAACATGTTCCCGAAGACC GCGCGCGGGCAGCCTGGCTTCTCCGCCGCTGGTATCGCACGGGTTTGACGGATGCGGTGATTGCCGGACGTAACTCGGCG CCTGGCGCGGCCCGTCTGAAAAGCGGCATCAATGGCATCATCCGCGTGGTTGTGGGCAGCGTGCTGACAGCTCTGACAGC CATTGCCACCCTCGGGCAAAACAAACGGGCGATGATGTCACGCGCTTATACCGTCAGCCGCGGGCTCGGCATGATTTCCT ACGCGCTCGGCAAAAGTTATGAGGAATACGGACGGAAGAAAACGCTGGCTTAA
Upstream 100 bases:
>100_bases CTGCATTAACCGATCATCTTTCTTGCCGCGCTATGTTGACGGTCAGTCAGATTTTAAAAGGAATGCGGAATTGACCCCTC CCGGCGATACAGCGCGCAGA
Downstream 100 bases:
>100_bases GCCTGCTGCGCCCAATAGCTCTCAAGGCTCGACGCAATCGCCTCGCATTTCGCGCGCGCTTCTGCGGGGGCGCCGAACGC CACCATGGCTGATCCTTCAA
Product: glycosyl transferase group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MQILVAAPTYRRNEMLDGLLKSLSELALPENADVRFVIIDNDRTGSARPVVEKWQQTFPAPLAYQLEEAPGVTHVRNRAL QLAGDADLLAFIDDDEFAHPAWLAALVRRYRETGAAGVFGPVQSVYPHTAPAWMKEWGVHGTPITEDRDQTKPGATCNCL IDMATVRKEAMSFDPRMSLTGAEDTLFFTQLLDRGHRLTQAKDALVYEHVPEDRARAAWLLRRWYRTGLTDAVIAGRNSA PGAARLKSGINGIIRVVVGSVLTALTAIATLGQNKRAMMSRAYTVSRGLGMISYALGKSYEEYGRKKTLA
Sequences:
>Translated_310_residues MQILVAAPTYRRNEMLDGLLKSLSELALPENADVRFVIIDNDRTGSARPVVEKWQQTFPAPLAYQLEEAPGVTHVRNRAL QLAGDADLLAFIDDDEFAHPAWLAALVRRYRETGAAGVFGPVQSVYPHTAPAWMKEWGVHGTPITEDRDQTKPGATCNCL IDMATVRKEAMSFDPRMSLTGAEDTLFFTQLLDRGHRLTQAKDALVYEHVPEDRARAAWLLRRWYRTGLTDAVIAGRNSA PGAARLKSGINGIIRVVVGSVLTALTAIATLGQNKRAMMSRAYTVSRGLGMISYALGKSYEEYGRKKTLA >Mature_310_residues MQILVAAPTYRRNEMLDGLLKSLSELALPENADVRFVIIDNDRTGSARPVVEKWQQTFPAPLAYQLEEAPGVTHVRNRAL QLAGDADLLAFIDDDEFAHPAWLAALVRRYRETGAAGVFGPVQSVYPHTAPAWMKEWGVHGTPITEDRDQTKPGATCNCL IDMATVRKEAMSFDPRMSLTGAEDTLFFTQLLDRGHRLTQAKDALVYEHVPEDRARAAWLLRRWYRTGLTDAVIAGRNSA PGAARLKSGINGIIRVVVGSVLTALTAIATLGQNKRAMMSRAYTVSRGLGMISYALGKSYEEYGRKKTLA
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34214; Mature: 34214
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILVAAPTYRRNEMLDGLLKSLSELALPENADVRFVIIDNDRTGSARPVVEKWQQTFPA CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCC PLAYQLEEAPGVTHVRNRALQLAGDADLLAFIDDDEFAHPAWLAALVRRYRETGAAGVFG CHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC PVQSVYPHTAPAWMKEWGVHGTPITEDRDQTKPGATCNCLIDMATVRKEAMSFDPRMSLT CHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GAEDTLFFTQLLDRGHRLTQAKDALVYEHVPEDRARAAWLLRRWYRTGLTDAVIAGRNSA CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC PGAARLKSGINGIIRVVVGSVLTALTAIATLGQNKRAMMSRAYTVSRGLGMISYALGKSY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCH EEYGRKKTLA HHHHHHCCCC >Mature Secondary Structure MQILVAAPTYRRNEMLDGLLKSLSELALPENADVRFVIIDNDRTGSARPVVEKWQQTFPA CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCC PLAYQLEEAPGVTHVRNRALQLAGDADLLAFIDDDEFAHPAWLAALVRRYRETGAAGVFG CHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC PVQSVYPHTAPAWMKEWGVHGTPITEDRDQTKPGATCNCLIDMATVRKEAMSFDPRMSLT CHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GAEDTLFFTQLLDRGHRLTQAKDALVYEHVPEDRARAAWLLRRWYRTGLTDAVIAGRNSA CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC PGAARLKSGINGIIRVVVGSVLTALTAIATLGQNKRAMMSRAYTVSRGLGMISYALGKSY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCH EEYGRKKTLA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]