| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797324
Identifier: 114797324
GI number: 114797324
Start: 2162105
End: 2163211
Strand: Reverse
Name: 114797324
Synonym: HNE_2089
Alternate gene names: NA
Gene position: 2163211-2162105 (Counterclockwise)
Preceding gene: 114797562
Following gene: 114799820
Centisome position: 58.39
GC content: 63.69
Gene sequence:
>1107_bases ATGAAATGGATGACGACGATGACGGTTACGCCCTCAGTCTGGAACGTGTTCGCGGGCGCCGCATTGCGGCTGGCCGCGCT TGTCGTGGGCGCGCTCTCCGTCGCCGTGGCCGCCTGCGCTACGCCGGTAACCCAGGGCGCTCTCAGCCCGGCGGTGCAGG TCACGCCCGCCTTCCTGCCTGAAAGCAACCAGTTCATCACTCAGGACGGCGCCCGGCTGGGGCTGACAGTCTGGCCGGCC GAAGGCACCGATAATCCGGAATATGTCGTCGTCGGCGTCCATGGCATGAACGATTATGCCGAGGCCTTCCACATGGCCGC GCCTTATTGGGCGCGTAACGGCGTCACCACTTACGCCTACGATCAACGGGGCTTTGGCCGCTCGCCCAACAAGGGAATCT GGCCCCAGGAAGAGCTGATGCGCGAAGACCTTCGCACGGCTGTCAATGTCGCGCGCGCACGCCACCCCGATGCGATCATT ACAGTTGTGGGCATTTCCATGGGCGGCTCCGTGGCTCTCACCGCTTTTGGGTCGGACCGTCCCCCGAAAGCAGACCGCCT GATAGTGTCCGGGCCGGGGCTCCGGGGGTGGGGCGCCATTAACCCGCTCTACCGGGTCAGCCTGTGGGCAACGGCCCATG CTAATCCCGATTGGCTCGTCGTGCCGCCCGTTGGCCTCGTCAAGATCGAGCCGTCTGACAACAATGCCATGCTGCGCCGG ACTTGGTCTGACCCGCACATGACCTACAGGACGCGAATTGATCAGGTCTATGGCCTCGTTGCCTTGATGGAGAATGCCAA TACAGCCGTCGCCCGCCTCAAGCCGAATGTGCCGACGCTGATTTCCTATGGCGCACGGGATATTGTCATCCCGGAGAATG GCGTGCGCCGGGCGGCAGACATCCTGCCGTCCTTCGTCCGCACGGTCTATTATCCCGGAGGTTATCACATGTTGCTCCGC GATCTTCAGGCCGAGCGGGTCCACGCTGACTATCTGGCCTTCATCCAGGACCCCGCCGCCGCGATGCCGAGCGGGGAGGG GGAATGGCCTTTCCGTGAAAACTGCACGCATTGGGCGTCTGTTGACCGTCCGCCCGTGGCTTGCTGA
Upstream 100 bases:
>100_bases CTGCGGCTTGACTGTTGCAGCGCCGCACACCTCTGGGCAAAGTAAAACCGGCCATGTCAGGCGCCGTTCATCTGACGGTG CCATCATGACGGCGCACTTT
Downstream 100 bases:
>100_bases TGAAGCCTCATGCCTGCATTTCTTGATAAGGAAGAGGTAATGCTCGCCCATGATGGGGCGCGGCTTGGCCTGACGGTCTG GAAACCTTCCGGCGCCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Acylglycerol Lipase; Alpha/Beta Fold Family Hydrolase; Esterase/Lipase; Monoglyceride Lipase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKWMTTMTVTPSVWNVFAGAALRLAALVVGALSVAVAACATPVTQGALSPAVQVTPAFLPESNQFITQDGARLGLTVWPA EGTDNPEYVVVGVHGMNDYAEAFHMAAPYWARNGVTTYAYDQRGFGRSPNKGIWPQEELMREDLRTAVNVARARHPDAII TVVGISMGGSVALTAFGSDRPPKADRLIVSGPGLRGWGAINPLYRVSLWATAHANPDWLVVPPVGLVKIEPSDNNAMLRR TWSDPHMTYRTRIDQVYGLVALMENANTAVARLKPNVPTLISYGARDIVIPENGVRRAADILPSFVRTVYYPGGYHMLLR DLQAERVHADYLAFIQDPAAAMPSGEGEWPFRENCTHWASVDRPPVAC
Sequences:
>Translated_368_residues MKWMTTMTVTPSVWNVFAGAALRLAALVVGALSVAVAACATPVTQGALSPAVQVTPAFLPESNQFITQDGARLGLTVWPA EGTDNPEYVVVGVHGMNDYAEAFHMAAPYWARNGVTTYAYDQRGFGRSPNKGIWPQEELMREDLRTAVNVARARHPDAII TVVGISMGGSVALTAFGSDRPPKADRLIVSGPGLRGWGAINPLYRVSLWATAHANPDWLVVPPVGLVKIEPSDNNAMLRR TWSDPHMTYRTRIDQVYGLVALMENANTAVARLKPNVPTLISYGARDIVIPENGVRRAADILPSFVRTVYYPGGYHMLLR DLQAERVHADYLAFIQDPAAAMPSGEGEWPFRENCTHWASVDRPPVAC >Mature_368_residues MKWMTTMTVTPSVWNVFAGAALRLAALVVGALSVAVAACATPVTQGALSPAVQVTPAFLPESNQFITQDGARLGLTVWPA EGTDNPEYVVVGVHGMNDYAEAFHMAAPYWARNGVTTYAYDQRGFGRSPNKGIWPQEELMREDLRTAVNVARARHPDAII TVVGISMGGSVALTAFGSDRPPKADRLIVSGPGLRGWGAINPLYRVSLWATAHANPDWLVVPPVGLVKIEPSDNNAMLRR TWSDPHMTYRTRIDQVYGLVALMENANTAVARLKPNVPTLISYGARDIVIPENGVRRAADILPSFVRTVYYPGGYHMLLR DLQAERVHADYLAFIQDPAAAMPSGEGEWPFRENCTHWASVDRPPVAC
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40101; Mature: 40101
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWMTTMTVTPSVWNVFAGAALRLAALVVGALSVAVAACATPVTQGALSPAVQVTPAFLP CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC ESNQFITQDGARLGLTVWPAEGTDNPEYVVVGVHGMNDYAEAFHMAAPYWARNGVTTYAY CCCCEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHCCCEEEEEE DQRGFGRSPNKGIWPQEELMREDLRTAVNVARARHPDAIITVVGISMGGSVALTAFGSDR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCC PPKADRLIVSGPGLRGWGAINPLYRVSLWATAHANPDWLVVPPVGLVKIEPSDNNAMLRR CCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEE TWSDPHMTYRTRIDQVYGLVALMENANTAVARLKPNVPTLISYGARDIVIPENGVRRAAD ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEEEECCCCHHHHHH ILPSFVRTVYYPGGYHMLLRDLQAERVHADYLAFIQDPAAAMPSGEGEWPFRENCTHWAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCHHCC VDRPPVAC CCCCCCCC >Mature Secondary Structure MKWMTTMTVTPSVWNVFAGAALRLAALVVGALSVAVAACATPVTQGALSPAVQVTPAFLP CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC ESNQFITQDGARLGLTVWPAEGTDNPEYVVVGVHGMNDYAEAFHMAAPYWARNGVTTYAY CCCCEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHCCCEEEEEE DQRGFGRSPNKGIWPQEELMREDLRTAVNVARARHPDAIITVVGISMGGSVALTAFGSDR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCC PPKADRLIVSGPGLRGWGAINPLYRVSLWATAHANPDWLVVPPVGLVKIEPSDNNAMLRR CCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEE TWSDPHMTYRTRIDQVYGLVALMENANTAVARLKPNVPTLISYGARDIVIPENGVRRAAD ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEEEECCCCHHHHHH ILPSFVRTVYYPGGYHMLLRDLQAERVHADYLAFIQDPAAAMPSGEGEWPFRENCTHWAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCHHCC VDRPPVAC CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA