| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ilvE [H]
Identifier: 114797299
GI number: 114797299
Start: 2465141
End: 2465968
Strand: Reverse
Name: ilvE [H]
Synonym: HNE_2367
Alternate gene names: 114797299
Gene position: 2465968-2465141 (Counterclockwise)
Preceding gene: 114798283
Following gene: 114797314
Centisome position: 66.56
GC content: 64.73
Gene sequence:
>828_bases ATGATCCGGTTCAGCCAACCCGGCGCGGCCCCTGAAAACACAGAGCTTTTTGATCTCACCGATCGCGGCCTGCTGCTGGC CGATGGTGTGTTCGATACCTCGCGCGTTGTGGGTGGACGGATCATCCAGAAGCGCGCGCATTTGATGCGTCTGGCGTCCG ACGCTGCGGCCCTCGGGGTCGGCGCCAACCTGTCAGAGCTTGACGCTCTGGCGCAGGAAGCCGTTCCGCAGAATGCAAAT GGCGCCTTGCGTCTCACCGTCACGCGTGGCCCCGGCGGGCGCGGTCTGGCGGGCGCGGCAACCGGGGCGGCAACCCTGCT GGCGCGCTTTTCTCCGATGGACGTTGCTTTTCCCATGCCGCCCGTCCGGCTGCGGATCAGCAATATCCGGCGCAATCCCA CCTCTCCCTCGGCGCGCCACAAGACCCTGTCCTATACGGACAATATCATGGCGCTGCGCGAGGCGATGGCGATGGGATAT GACGAGGCCCTGTTGCTTTCGCCCGAAGGCCGGGTCGCCTGCGCCTCGGCGGCGAATGTTTTTGCCCTGTTTGGAAACCT GCTGGTCACCCCGCCGCTGTCAGAAGGCGTGTTGCCGGGCGTTGTGCGCGGCTGGCTGATCGGCGCTGCGCGGGAGGCAG GCCTTGAGACCGCGCAGGAAAGCCTGACGCCAGAGCGTCTGTCCGAGGCCGACAGCATTTTCCTGACCAACAGCCTGCGC ATCTTTCAGCCTGTCAGCGAGTTTGCCGGGCAGGCATTCGAAACGGAATTGCCCGCCGCCCTGATCGGCCTCGGCAAAAC CCTTCTGGAGGGAGGTTTCGATGATTGA
Upstream 100 bases:
>100_bases CCATCTACGGCATCCAGTTTCATCCAGAATCCATCCTCACCCAGCATGGCCCGGCCCTGCTTCAGAACTTCCTCAACATC GCCCGCGCCTGGAGGCAGAC
Downstream 100 bases:
>100_bases TACTGAGCGGCGCGACAGGACACTCGCCCGTGTGCGCAACGAACCTGTCATCATGGGCATTCTCAATGTGACGCCCGACA GCTTCTCCGATGGCGGACGG
Product: class IV aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIRFSQPGAAPENTELFDLTDRGLLLADGVFDTSRVVGGRIIQKRAHLMRLASDAAALGVGANLSELDALAQEAVPQNAN GALRLTVTRGPGGRGLAGAATGAATLLARFSPMDVAFPMPPVRLRISNIRRNPTSPSARHKTLSYTDNIMALREAMAMGY DEALLLSPEGRVACASAANVFALFGNLLVTPPLSEGVLPGVVRGWLIGAAREAGLETAQESLTPERLSEADSIFLTNSLR IFQPVSEFAGQAFETELPAALIGLGKTLLEGGFDD
Sequences:
>Translated_275_residues MIRFSQPGAAPENTELFDLTDRGLLLADGVFDTSRVVGGRIIQKRAHLMRLASDAAALGVGANLSELDALAQEAVPQNAN GALRLTVTRGPGGRGLAGAATGAATLLARFSPMDVAFPMPPVRLRISNIRRNPTSPSARHKTLSYTDNIMALREAMAMGY DEALLLSPEGRVACASAANVFALFGNLLVTPPLSEGVLPGVVRGWLIGAAREAGLETAQESLTPERLSEADSIFLTNSLR IFQPVSEFAGQAFETELPAALIGLGKTLLEGGFDD >Mature_275_residues MIRFSQPGAAPENTELFDLTDRGLLLADGVFDTSRVVGGRIIQKRAHLMRLASDAAALGVGANLSELDALAQEAVPQNAN GALRLTVTRGPGGRGLAGAATGAATLLARFSPMDVAFPMPPVRLRISNIRRNPTSPSARHKTLSYTDNIMALREAMAMGY DEALLLSPEGRVACASAANVFALFGNLLVTPPLSEGVLPGVVRGWLIGAAREAGLETAQESLTPERLSEADSIFLTNSLR IFQPVSEFAGQAFETELPAALIGLGKTLLEGGFDD
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787338, Length=254, Percent_Identity=26.7716535433071, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI48994963, Length=117, Percent_Identity=29.9145299145299, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 28922; Mature: 28922
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFSQPGAAPENTELFDLTDRGLLLADGVFDTSRVVGGRIIQKRAHLMRLASDAAALGV CCEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GANLSELDALAQEAVPQNANGALRLTVTRGPGGRGLAGAATGAATLLARFSPMDVAFPMP CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCC PVRLRISNIRRNPTSPSARHKTLSYTDNIMALREAMAMGYDEALLLSPEGRVACASAANV CCEEEEEHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHH FALFGNLLVTPPLSEGVLPGVVRGWLIGAAREAGLETAQESLTPERLSEADSIFLTNSLR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHH IFQPVSEFAGQAFETELPAALIGLGKTLLEGGFDD HHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIRFSQPGAAPENTELFDLTDRGLLLADGVFDTSRVVGGRIIQKRAHLMRLASDAAALGV CCEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GANLSELDALAQEAVPQNANGALRLTVTRGPGGRGLAGAATGAATLLARFSPMDVAFPMP CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCC PVRLRISNIRRNPTSPSARHKTLSYTDNIMALREAMAMGYDEALLLSPEGRVACASAANV CCEEEEEHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHH FALFGNLLVTPPLSEGVLPGVVRGWLIGAAREAGLETAQESLTPERLSEADSIFLTNSLR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHH IFQPVSEFAGQAFETELPAALIGLGKTLLEGGFDD HHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]