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The map label for this gene is yhbH [C]

Identifier: 114332264

GI number: 114332264

Start: 2429705

End: 2430040

Strand: Direct

Name: yhbH [C]

Synonym: Neut_2304

Alternate gene names: 114332264

Gene position: 2429705-2430040 (Clockwise)

Preceding gene: 114332263

Following gene: 114332265

Centisome position: 91.31

GC content: 45.54

Gene sequence:

>336_bases
ATGAATTTGAATCTCACCGGTAATCACGTGGCAATCACACCTGCCATGCGTGACTACGTTACGTCCAAAATCGAGAGGAG
CACACGCCACTTTGACAATATCATGGCTATCAATGTGACCCTTTCCGTGGATAAACTCAAACAAAAGGCTGAAGCCACGG
TTCACTTACCCGGTAGAGAGATTTTTGTCGAGGCCGATAGCACCGATATGTATGCTTCAATTGATAGTCTGGCAGATAAG
CTGGCTCGCCAGATCCTTAAGCATAAGGAAAAAAATATTAGACAGCGCAACGATCAGGGTGGGCTGAAAGATCAGGAATT
TGAACAGCCCGAATAA

Upstream 100 bases:

>100_bases
GTGTACTCGAAACCTGATTTCAGGTCGGTATAGCCAGACAGATACTTTCAGAGTTTTCCATGATACCCTTGAACACGACT
CTCTCACATAAGGAGAAATA

Downstream 100 bases:

>100_bases
ACCCGTCCACTTCTCCTCATATATTTGTAAAGAACTGCAGCAGCAATGCCAGAAAAAACTCGAAAAATGGGACCGTACCT
AATCAACAGCCAACTATAGC

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGREIFVEADSTDMYASIDSLADK
LARQILKHKEKNIRQRNDQGGLKDQEFEQPE

Sequences:

>Translated_111_residues
MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGREIFVEADSTDMYASIDSLADK
LARQILKHKEKNIRQRNDQGGLKDQEFEQPE
>Mature_111_residues
MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGREIFVEADSTDMYASIDSLADK
LARQILKHKEKNIRQRNDQGGLKDQEFEQPE

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=91, Percent_Identity=49.4505494505495, Blast_Score=96, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 12650; Mature: 12650

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGRE
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHCCEEECCCCE
IFVEADSTDMYASIDSLADKLARQILKHKEKNIRQRNDQGGLKDQEFEQPE
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGRE
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHCCEEECCCCE
IFVEADSTDMYASIDSLADKLARQILKHKEKNIRQRNDQGGLKDQEFEQPE
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]