| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114332233
Identifier: 114332233
GI number: 114332233
Start: 2396574
End: 2398754
Strand: Direct
Name: 114332233
Synonym: Neut_2273
Alternate gene names: NA
Gene position: 2396574-2398754 (Clockwise)
Preceding gene: 114332232
Following gene: 114332234
Centisome position: 90.06
GC content: 46.68
Gene sequence:
>2181_bases ATGCACTACCTCGATGTAATTCCGTTAAATCCAATTAACATGAAATTTAATCCCAATTACCCCAACGACAACAACAAGGG GCAACGTCAACTGTGGAATGCGCTCAAGAACGCTTTTGAGCAGGATGAAGGTGTTGCGTACTACCGATACCCTATCTTCG CAACGAGTAAACGAGGGCGAAGTGAGCCTGATTTCCTCATGATTCATCGCCGCTTCGGCATATGGATCTTTGAAAGCAAG GGCTGCACGATTGGAAATATCGCAGCAATTGAGGGCCACGACTGGCAAATGCGCGACTGGTACGCTGACAGCATGTCTCC TATAAGCCAGATCGAAGCGCAACTATTTGAAGTCAGGGCGTTATTTAAACCAAGCCCGATGTTAGAAAAACTTAAAATAC CATTCGAGTACCGGGTTGTACTGCCGTTCATTTCAGCCTCTGAATGGGCTATGCAAGGTTTTTCGAAACATCCAAGTACA AATGGTGTTGTCTGGCTTGAAGAAGATATTTTACAGACATCTTTCAGGCAACAGGTTAAAGCTGTTTCATCTGCCTATAT GCCCACACTTGACGATGCTCAATGGGAGCAAATTCTCGGAGTATTTCGAGGTATCGCTACGACCGAGCCACCTAGACAAC CCAATCCAGGTGCCCCTGTTTCTTGCCATAGCAGGGTGATTCATGCCGTTGAAAGCCGTTTGCGTATTTTGGATGAGAAG CAAGATCGAATTTCTCAGGAAGTCCCTGAAGGTCCCCAGCGCATGCGTGGAATCGCCGGAAGTGGCAAAACAGTCTTGTT TACAAGACGAGTTGCACAGATGCATGCATCTAATCCGGATTGGGAAATTGCATTTGTTTTCTGGAGTCGTTCACTTTACC AACAAATTCGAAATCTTATTGATAAGCACTACCGACGATTAACCGGCGCAACCCCTGACTGGAATAAGTTGCATATCTGG CATGCATGGGGAAGCAAGGAACTCACCGGCTTCTATCGTGAATTGGCATTCCGGTGGAAATGTCGCTTCTTGAGTTTTGG GGATGCAGAGAAAATGACAATCCATGGAGAATCAGCATATGAAGCTGCCTGCCGCAACCTCGAAGAAGAATGCAAAAGTT GTCCATCATTGCTCGACGCCATCGTTATTGACGAAGGACAAGATCTGCCGGCATCTTTCTATCGAATAGCTCATCATGCG CTACGTGCACCAAAACGCCTCTATTGGGCTTATGACGAAGCACAAGGAGTAGATTCTCTGATCGTCCCGAATGCCTCAGA GATATTTGGCAGGGACGAGCAAGGTCGTCCTTGTATTGATCTATCTGGCAGCTATGCGAGCGGCATGCAGAAGGCGCATA ATATGAATTGTTGCTATCGAACTCCTCGTCAGATTCTTTTAGCAGCACATGCCATCAACATGGGGTTATTTCGAGAAGGG GGGCCACTTCAAGGAATCACACGTAAAGAAGACTGGATCGCTTTGGGTTACCAAGTGGTAGAAGGTGATTTCAGTGCAGC AAGCGTAAAGGCATGTGCCACCGTTATGCTCCAGCGTCCGGACAAGACAAGTGGCCACCCCATTGACAATCCCGAGTTCG GAGCACCGTTGGACAAATCAACAATCTTGGTGATTCATGAGAGCTTAAGCCAGGCAGAAGATGTTGATTTCGTTGCAACC AGTATTCACCGTGATCTTGAATCAGGTCTTCGTCCAGAAGATATTGCAATCGTTGGCCTTGAGCCCACACGCTATCTGTT CCCGCAAATTGAGGATCGCCTCCGTACACTTGGCATCAGGGTTCTCTCCCTGAACAACCAAAACAAGGATCAATTTCATC AAGCAGGATATGTAACGATTTCAAGTATTCGGCGAGCCAAAGGTAATGAAGCATACAAAGTCTATGCCCTCAATCTTCAC ATGGCGGGAGCTTTACAAGCCAAAAGCCCGGAAAAAGAGATGATTGCTCGAAACCAGATATTTGTTGCGCTGACTCGTAC GAAATTATGGTGTGTTGCTGTCGGGAGACATGGATCTATCATGAAAGAATTACTGGATACCTCAAAGAACAATGGCTTTC TTCGCTTCCCTGCCTTCAATCAGGCCAGCCTGAAAAGATCAATGAGTGATACGGATGCTTTGCAAGAAAACTTATGTAGC CAAACAACTGTAAGCGCCTAA
Upstream 100 bases:
>100_bases ATCAAAATTGAACTTTTCCCCTACACTGTCGTTGCAAGTAACTCCAGAGTTGATGTAACTCTTATATACGGTGAGCCTAT GCAAATAGAGCCAACCAAGG
Downstream 100 bases:
>100_bases CGACACTATCTGTTATTTTTTCTATACTAAATAATTTAATGAACTCTGGCATTAACGGCAATAGTTCATCGGTACGATCT GGGCCAGACAAAGAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MHYLDVIPLNPINMKFNPNYPNDNNKGQRQLWNALKNAFEQDEGVAYYRYPIFATSKRGRSEPDFLMIHRRFGIWIFESK GCTIGNIAAIEGHDWQMRDWYADSMSPISQIEAQLFEVRALFKPSPMLEKLKIPFEYRVVLPFISASEWAMQGFSKHPST NGVVWLEEDILQTSFRQQVKAVSSAYMPTLDDAQWEQILGVFRGIATTEPPRQPNPGAPVSCHSRVIHAVESRLRILDEK QDRISQEVPEGPQRMRGIAGSGKTVLFTRRVAQMHASNPDWEIAFVFWSRSLYQQIRNLIDKHYRRLTGATPDWNKLHIW HAWGSKELTGFYRELAFRWKCRFLSFGDAEKMTIHGESAYEAACRNLEEECKSCPSLLDAIVIDEGQDLPASFYRIAHHA LRAPKRLYWAYDEAQGVDSLIVPNASEIFGRDEQGRPCIDLSGSYASGMQKAHNMNCCYRTPRQILLAAHAINMGLFREG GPLQGITRKEDWIALGYQVVEGDFSAASVKACATVMLQRPDKTSGHPIDNPEFGAPLDKSTILVIHESLSQAEDVDFVAT SIHRDLESGLRPEDIAIVGLEPTRYLFPQIEDRLRTLGIRVLSLNNQNKDQFHQAGYVTISSIRRAKGNEAYKVYALNLH MAGALQAKSPEKEMIARNQIFVALTRTKLWCVAVGRHGSIMKELLDTSKNNGFLRFPAFNQASLKRSMSDTDALQENLCS QTTVSA
Sequences:
>Translated_726_residues MHYLDVIPLNPINMKFNPNYPNDNNKGQRQLWNALKNAFEQDEGVAYYRYPIFATSKRGRSEPDFLMIHRRFGIWIFESK GCTIGNIAAIEGHDWQMRDWYADSMSPISQIEAQLFEVRALFKPSPMLEKLKIPFEYRVVLPFISASEWAMQGFSKHPST NGVVWLEEDILQTSFRQQVKAVSSAYMPTLDDAQWEQILGVFRGIATTEPPRQPNPGAPVSCHSRVIHAVESRLRILDEK QDRISQEVPEGPQRMRGIAGSGKTVLFTRRVAQMHASNPDWEIAFVFWSRSLYQQIRNLIDKHYRRLTGATPDWNKLHIW HAWGSKELTGFYRELAFRWKCRFLSFGDAEKMTIHGESAYEAACRNLEEECKSCPSLLDAIVIDEGQDLPASFYRIAHHA LRAPKRLYWAYDEAQGVDSLIVPNASEIFGRDEQGRPCIDLSGSYASGMQKAHNMNCCYRTPRQILLAAHAINMGLFREG GPLQGITRKEDWIALGYQVVEGDFSAASVKACATVMLQRPDKTSGHPIDNPEFGAPLDKSTILVIHESLSQAEDVDFVAT SIHRDLESGLRPEDIAIVGLEPTRYLFPQIEDRLRTLGIRVLSLNNQNKDQFHQAGYVTISSIRRAKGNEAYKVYALNLH MAGALQAKSPEKEMIARNQIFVALTRTKLWCVAVGRHGSIMKELLDTSKNNGFLRFPAFNQASLKRSMSDTDALQENLCS QTTVSA >Mature_726_residues MHYLDVIPLNPINMKFNPNYPNDNNKGQRQLWNALKNAFEQDEGVAYYRYPIFATSKRGRSEPDFLMIHRRFGIWIFESK GCTIGNIAAIEGHDWQMRDWYADSMSPISQIEAQLFEVRALFKPSPMLEKLKIPFEYRVVLPFISASEWAMQGFSKHPST NGVVWLEEDILQTSFRQQVKAVSSAYMPTLDDAQWEQILGVFRGIATTEPPRQPNPGAPVSCHSRVIHAVESRLRILDEK QDRISQEVPEGPQRMRGIAGSGKTVLFTRRVAQMHASNPDWEIAFVFWSRSLYQQIRNLIDKHYRRLTGATPDWNKLHIW HAWGSKELTGFYRELAFRWKCRFLSFGDAEKMTIHGESAYEAACRNLEEECKSCPSLLDAIVIDEGQDLPASFYRIAHHA LRAPKRLYWAYDEAQGVDSLIVPNASEIFGRDEQGRPCIDLSGSYASGMQKAHNMNCCYRTPRQILLAAHAINMGLFREG GPLQGITRKEDWIALGYQVVEGDFSAASVKACATVMLQRPDKTSGHPIDNPEFGAPLDKSTILVIHESLSQAEDVDFVAT SIHRDLESGLRPEDIAIVGLEPTRYLFPQIEDRLRTLGIRVLSLNNQNKDQFHQAGYVTISSIRRAKGNEAYKVYALNLH MAGALQAKSPEKEMIARNQIFVALTRTKLWCVAVGRHGSIMKELLDTSKNNGFLRFPAFNQASLKRSMSDTDALQENLCS QTTVSA
Specific function: Unknown
COG id: COG3972
COG function: function code R; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82379; Mature: 82379
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYLDVIPLNPINMKFNPNYPNDNNKGQRQLWNALKNAFEQDEGVAYYRYPIFATSKRGR CCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCC SEPDFLMIHRRFGIWIFESKGCTIGNIAAIEGHDWQMRDWYADSMSPISQIEAQLFEVRA CCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHH LFKPSPMLEKLKIPFEYRVVLPFISASEWAMQGFSKHPSTNGVVWLEEDILQTSFRQQVK HCCCCCCHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH AVSSAYMPTLDDAQWEQILGVFRGIATTEPPRQPNPGAPVSCHSRVIHAVESRLRILDEK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH QDRISQEVPEGPQRMRGIAGSGKTVLFTRRVAQMHASNPDWEIAFVFWSRSLYQQIRNLI HHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHH DKHYRRLTGATPDWNKLHIWHAWGSKELTGFYRELAFRWKCRFLSFGDAEKMTIHGESAY HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHH EAACRNLEEECKSCPSLLDAIVIDEGQDLPASFYRIAHHALRAPKRLYWAYDEAQGVDSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHEEEEEHHHCCCCEE IVPNASEIFGRDEQGRPCIDLSGSYASGMQKAHNMNCCYRTPRQILLAAHAINMGLFREG ECCCCHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCC GPLQGITRKEDWIALGYQVVEGDFSAASVKACATVMLQRPDKTSGHPIDNPEFGAPLDKS CCCCCCCCCCCEEEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TILVIHESLSQAEDVDFVATSIHRDLESGLRPEDIAIVGLEPTRYLFPQIEDRLRTLGIR EEEEEECHHCCHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCEE VLSLNNQNKDQFHQAGYVTISSIRRAKGNEAYKVYALNLHMAGALQAKSPEKEMIARNQI EEEECCCCHHHHHHCCCEEHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCE FVALTRTKLWCVAVGRHGSIMKELLDTSKNNGFLRFPAFNQASLKRSMSDTDALQENLCS EEEEECCEEEEEEECCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHC QTTVSA CCCCCC >Mature Secondary Structure MHYLDVIPLNPINMKFNPNYPNDNNKGQRQLWNALKNAFEQDEGVAYYRYPIFATSKRGR CCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCC SEPDFLMIHRRFGIWIFESKGCTIGNIAAIEGHDWQMRDWYADSMSPISQIEAQLFEVRA CCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHH LFKPSPMLEKLKIPFEYRVVLPFISASEWAMQGFSKHPSTNGVVWLEEDILQTSFRQQVK HCCCCCCHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH AVSSAYMPTLDDAQWEQILGVFRGIATTEPPRQPNPGAPVSCHSRVIHAVESRLRILDEK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH QDRISQEVPEGPQRMRGIAGSGKTVLFTRRVAQMHASNPDWEIAFVFWSRSLYQQIRNLI HHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHH DKHYRRLTGATPDWNKLHIWHAWGSKELTGFYRELAFRWKCRFLSFGDAEKMTIHGESAY HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHH EAACRNLEEECKSCPSLLDAIVIDEGQDLPASFYRIAHHALRAPKRLYWAYDEAQGVDSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHEEEEEHHHCCCCEE IVPNASEIFGRDEQGRPCIDLSGSYASGMQKAHNMNCCYRTPRQILLAAHAINMGLFREG ECCCCHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCC GPLQGITRKEDWIALGYQVVEGDFSAASVKACATVMLQRPDKTSGHPIDNPEFGAPLDKS CCCCCCCCCCCEEEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TILVIHESLSQAEDVDFVATSIHRDLESGLRPEDIAIVGLEPTRYLFPQIEDRLRTLGIR EEEEEECHHCCHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCEE VLSLNNQNKDQFHQAGYVTISSIRRAKGNEAYKVYALNLHMAGALQAKSPEKEMIARNQI EEEECCCCHHHHHHCCCEEHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCE FVALTRTKLWCVAVGRHGSIMKELLDTSKNNGFLRFPAFNQASLKRSMSDTDALQENLCS EEEEECCEEEEEEECCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHC QTTVSA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA