| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114332234
Identifier: 114332234
GI number: 114332234
Start: 2398976
End: 2401006
Strand: Direct
Name: 114332234
Synonym: Neut_2274
Alternate gene names: NA
Gene position: 2398976-2401006 (Clockwise)
Preceding gene: 114332233
Following gene: 114332237
Centisome position: 90.15
GC content: 52.78
Gene sequence:
>2031_bases ATGGCTCCCCAATCTGAACTGACATTGCGCGGTATTGTTATTGGCATTTTTATTACACTGATATTTACTGCTGCCAATAT TTATTTTGGGCTAAAGGCGGGACTCACGTTTGCCACGTCGATTCCGGCGGCAGTAATTTCGATGGCGGTGCTGCGCAAGT TCCAGCATGTAACCATCCAGGAAAACAACATTGTACAAACAGTAGCATCAGCGGCGGGCACGCTGTCGGCGATTGTTTTT GTATTACCAGGCCTGATCATGATCGGCTGGTGGCAGGATTTTCCGTTTTGGATGACATTCGGCATTTGCCTGACCGGCGG CGTGCTGGGCGTGATGTACACCATTCCGCTGCGGCGGGCACTGGTGACTAATTCAGACTTACCGTACCCTGAAGGTGTGG CTTGTGCCGAGGTGTTGAAGGTCGGTACCGAGACCGGACGTTCCGGCAATGATGAAGGGAATCACTCAATCGGTCGTATC GGGTTGCGAGTAGTGATTGTTGGGAGCATCAGCTCAGCAGTTTTTGCTGTGATTGTAGCAACCAGGTTATTTGCTGCTTC CGTTTCGCACTACTTCAACGTGGGTACGCGCAGTGTGACGGGATTTGACTTCAGCTTGTCGCTGGCACTATTTGCCGTGG GACATCTGGTAGGCTTGTGGGTCGGGCTGGCCATGCTGGTAGGTGCGTTGGTAGGATGGGGATGGGCAGTTCCACATTAC AGCACCTTGCTTGATGTAGCAAACGGTTCGGCTGCACAGTTGGCGCAAGCCGTGTGGTCAGAAAAAGTACGCTTTCTGGG CGCAGGCACCATCGGCGTAGCTGCGGTATGGGCACTGGTCAAACTGGCGCGGCCAGTCATCAGCGGTTTACAGAATGCCT GGCGTTCAACCCGTATGCGCAAGGCCAGGCATGGCGATGCGTTGCCACGCACTGAATGCGATATCCCAATCTCCATCGTG TCTCTAGTCATTGCCATCACCATCGTACCCATCATCTGGCTGCTCATGGATTTCGTCCGCACCAGCGGACTGCATGCGCA TGTGATGCCGCTGGTGGCAGGCACTACACTTTTTATTTTACTCATCACAATTTTGGTCGCAGCCGTATGCGGTTATATGG CTGGCTTGATTGGCTCCAGCAACAGCCCGCTATCGGGGATAGGGATTTTGGTCATCATCGTGGTTTCACTGCTGCTGATG CTCGGCTTCGGACACCTGTACCCTGGTGACGAGGCACAGGCGCTAGTAGCGTATGCACTATTTGCCACCTCCATTATTTT CGCTGGAGCCACTATTGCCAATGACAACCTGCAAGATCTCAAGACTGGACAACTGGTGGATGCCACACCGTGGAAGCAAC AGGTAGCGCTAGTGATTGGCGTTGTCGCAGGCGCAATTATCATCCCTCCGGTATTGGATTTACTACGCGAGGCCTACAGT TTTGTCGGTGCACCAGGTGCTGAGCCGACACGTGCGCTACCTGCACCACAAGCGGATTTGATTTCGACATTGGCACAAGG CGTGATCGAGAACAGCGTCGCCTGGAATCTGCTTGGCATAGGTGCGCTGATTGGAGTTACAGCTGTAGTCATTGATGAAC TGCTGGCACGCACTCAAACAGCTACCAGGCTGCCGCCACTGGGAGTGGGACTGGGAATGTATCTGCCAACATCGACTACG CTGATAGTGGTGTCAGGCGCTTTGGCCGACGCTGTATTCAATCATTGCGCTGAATGTAAATCTGGGCCGCGCGCTGATAC CATCAAACAACTAGGCGTGCTGCTGGCATCGGGGATGATCGTAGGTGAAAGCCTGATAGGCGTGGTACTGGCAGCTATTA TTACATTTTCCGGTAGGGATGCACCATTAACATTGGTAGATGACGAATTTGCCAAGACTTCGCTGTGGCTAGGCGGGATC GCGTTTATGCTGCTGTTAGCTGCGCTGTATTACTGGATTATGCGAATGGAATCGCAAGCGACAAATCAAAACGAACACAG CATTACATCGTCAGTTAATGTGCAGGAGTAA
Upstream 100 bases:
>100_bases CAATACTGCAGCGGATACACTGTGCTTATCTACTTTTTTTACAAAACTACAGCATCACCCAGGATGATGCGAGCGCCTCT ACCAAATCAACTCAAATCCC
Downstream 100 bases:
>100_bases CCTGGGTATCTCGAGGAGCCATTACATCGAGTCGGCCACCTGGCTGGATTTTTGAAGATGAATACCTTTCAGACGGATAA TTCCTGTGACACATATTTAT
Product: oligopeptide transporter, OPT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MAPQSELTLRGIVIGIFITLIFTAANIYFGLKAGLTFATSIPAAVISMAVLRKFQHVTIQENNIVQTVASAAGTLSAIVF VLPGLIMIGWWQDFPFWMTFGICLTGGVLGVMYTIPLRRALVTNSDLPYPEGVACAEVLKVGTETGRSGNDEGNHSIGRI GLRVVIVGSISSAVFAVIVATRLFAASVSHYFNVGTRSVTGFDFSLSLALFAVGHLVGLWVGLAMLVGALVGWGWAVPHY STLLDVANGSAAQLAQAVWSEKVRFLGAGTIGVAAVWALVKLARPVISGLQNAWRSTRMRKARHGDALPRTECDIPISIV SLVIAITIVPIIWLLMDFVRTSGLHAHVMPLVAGTTLFILLITILVAAVCGYMAGLIGSSNSPLSGIGILVIIVVSLLLM LGFGHLYPGDEAQALVAYALFATSIIFAGATIANDNLQDLKTGQLVDATPWKQQVALVIGVVAGAIIIPPVLDLLREAYS FVGAPGAEPTRALPAPQADLISTLAQGVIENSVAWNLLGIGALIGVTAVVIDELLARTQTATRLPPLGVGLGMYLPTSTT LIVVSGALADAVFNHCAECKSGPRADTIKQLGVLLASGMIVGESLIGVVLAAIITFSGRDAPLTLVDDEFAKTSLWLGGI AFMLLLAALYYWIMRMESQATNQNEHSITSSVNVQE
Sequences:
>Translated_676_residues MAPQSELTLRGIVIGIFITLIFTAANIYFGLKAGLTFATSIPAAVISMAVLRKFQHVTIQENNIVQTVASAAGTLSAIVF VLPGLIMIGWWQDFPFWMTFGICLTGGVLGVMYTIPLRRALVTNSDLPYPEGVACAEVLKVGTETGRSGNDEGNHSIGRI GLRVVIVGSISSAVFAVIVATRLFAASVSHYFNVGTRSVTGFDFSLSLALFAVGHLVGLWVGLAMLVGALVGWGWAVPHY STLLDVANGSAAQLAQAVWSEKVRFLGAGTIGVAAVWALVKLARPVISGLQNAWRSTRMRKARHGDALPRTECDIPISIV SLVIAITIVPIIWLLMDFVRTSGLHAHVMPLVAGTTLFILLITILVAAVCGYMAGLIGSSNSPLSGIGILVIIVVSLLLM LGFGHLYPGDEAQALVAYALFATSIIFAGATIANDNLQDLKTGQLVDATPWKQQVALVIGVVAGAIIIPPVLDLLREAYS FVGAPGAEPTRALPAPQADLISTLAQGVIENSVAWNLLGIGALIGVTAVVIDELLARTQTATRLPPLGVGLGMYLPTSTT LIVVSGALADAVFNHCAECKSGPRADTIKQLGVLLASGMIVGESLIGVVLAAIITFSGRDAPLTLVDDEFAKTSLWLGGI AFMLLLAALYYWIMRMESQATNQNEHSITSSVNVQE >Mature_675_residues APQSELTLRGIVIGIFITLIFTAANIYFGLKAGLTFATSIPAAVISMAVLRKFQHVTIQENNIVQTVASAAGTLSAIVFV LPGLIMIGWWQDFPFWMTFGICLTGGVLGVMYTIPLRRALVTNSDLPYPEGVACAEVLKVGTETGRSGNDEGNHSIGRIG LRVVIVGSISSAVFAVIVATRLFAASVSHYFNVGTRSVTGFDFSLSLALFAVGHLVGLWVGLAMLVGALVGWGWAVPHYS TLLDVANGSAAQLAQAVWSEKVRFLGAGTIGVAAVWALVKLARPVISGLQNAWRSTRMRKARHGDALPRTECDIPISIVS LVIAITIVPIIWLLMDFVRTSGLHAHVMPLVAGTTLFILLITILVAAVCGYMAGLIGSSNSPLSGIGILVIIVVSLLLML GFGHLYPGDEAQALVAYALFATSIIFAGATIANDNLQDLKTGQLVDATPWKQQVALVIGVVAGAIIIPPVLDLLREAYSF VGAPGAEPTRALPAPQADLISTLAQGVIENSVAWNLLGIGALIGVTAVVIDELLARTQTATRLPPLGVGLGMYLPTSTTL IVVSGALADAVFNHCAECKSGPRADTIKQLGVLLASGMIVGESLIGVVLAAIITFSGRDAPLTLVDDEFAKTSLWLGGIA FMLLLAALYYWIMRMESQATNQNEHSITSSVNVQE
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 71154; Mature: 71022
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPQSELTLRGIVIGIFITLIFTAANIYFGLKAGLTFATSIPAAVISMAVLRKFQHVTIQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEC ENNIVQTVASAAGTLSAIVFVLPGLIMIGWWQDFPFWMTFGICLTGGVLGVMYTIPLRRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVTNSDLPYPEGVACAEVLKVGTETGRSGNDEGNHSIGRIGLRVVIVGSISSAVFAVIVA HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEECHHHHHHHHHHH TRLFAASVSHYFNVGTRSVTGFDFSLSLALFAVGHLVGLWVGLAMLVGALVGWGWAVPHY HHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH STLLDVANGSAAQLAQAVWSEKVRFLGAGTIGVAAVWALVKLARPVISGLQNAWRSTRMR HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARHGDALPRTECDIPISIVSLVIAITIVPIIWLLMDFVRTSGLHAHVMPLVAGTTLFIL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LITILVAAVCGYMAGLIGSSNSPLSGIGILVIIVVSLLLMLGFGHLYPGDEAQALVAYAL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FATSIIFAGATIANDNLQDLKTGQLVDATPWKQQVALVIGVVAGAIIIPPVLDLLREAYS HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAPGAEPTRALPAPQADLISTLAQGVIENSVAWNLLGIGALIGVTAVVIDELLARTQT HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRLPPLGVGLGMYLPTSTTLIVVSGALADAVFNHCAECKSGPRADTIKQLGVLLASGMI HHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGESLIGVVLAAIITFSGRDAPLTLVDDEFAKTSLWLGGIAFMLLLAALYYWIMRMESQA HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TNQNEHSITSSVNVQE CCCCCHHHHCCCCCCC >Mature Secondary Structure APQSELTLRGIVIGIFITLIFTAANIYFGLKAGLTFATSIPAAVISMAVLRKFQHVTIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEC ENNIVQTVASAAGTLSAIVFVLPGLIMIGWWQDFPFWMTFGICLTGGVLGVMYTIPLRRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVTNSDLPYPEGVACAEVLKVGTETGRSGNDEGNHSIGRIGLRVVIVGSISSAVFAVIVA HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEECHHHHHHHHHHH TRLFAASVSHYFNVGTRSVTGFDFSLSLALFAVGHLVGLWVGLAMLVGALVGWGWAVPHY HHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH STLLDVANGSAAQLAQAVWSEKVRFLGAGTIGVAAVWALVKLARPVISGLQNAWRSTRMR HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARHGDALPRTECDIPISIVSLVIAITIVPIIWLLMDFVRTSGLHAHVMPLVAGTTLFIL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LITILVAAVCGYMAGLIGSSNSPLSGIGILVIIVVSLLLMLGFGHLYPGDEAQALVAYAL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FATSIIFAGATIANDNLQDLKTGQLVDATPWKQQVALVIGVVAGAIIIPPVLDLLREAYS HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAPGAEPTRALPAPQADLISTLAQGVIENSVAWNLLGIGALIGVTAVVIDELLARTQT HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRLPPLGVGLGMYLPTSTTLIVVSGALADAVFNHCAECKSGPRADTIKQLGVLLASGMI HHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGESLIGVVLAAIITFSGRDAPLTLVDDEFAKTSLWLGGIAFMLLLAALYYWIMRMESQA HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TNQNEHSITSSVNVQE CCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]