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The map label for this gene is yfgC [C]

Identifier: 114331975

GI number: 114331975

Start: 2123715

End: 2125229

Strand: Direct

Name: yfgC [C]

Synonym: Neut_2009

Alternate gene names: 114331975

Gene position: 2123715-2125229 (Clockwise)

Preceding gene: 114331974

Following gene: 114331976

Centisome position: 79.81

GC content: 50.5

Gene sequence:

>1515_bases
ATGAAACTCCACTACCTTATTATCATTGTGCCCTTGCTGTTTCCAGCCCATATTTTTGGACAGGAACTGCCTGATCTGGG
GGATGTCTCGCAAGCTACGGTAACACCTCACCAGGAGCGGCAAATCGGGATGCAGATCATGCGTGAAATCCGCGCCGATG
CCAGTTATCTGGATGATCCTGAAATCACCGACTATCTTGCCAGATTGGGCCACCGGCTGATTTCTGCTGCCGGCCAGACA
AATTCAGACAATCCATTTGAGTTTTTTGCCATTGATGATTCCTCAATCAATGCTTTTGCGCTTCCCGGCGGATTTGTGGG
ATTTCATAGCGGCCTGATCACCGCCGCACAAAATGAATCCGAGCTGGCAGGCGTTATGGCACATGAAATTGCACACGTCA
CCCAAAAACACTTGGCCAGAATGCTCTCCGGGAGCTCATATCTGGGTATCATCGGCTCGATCGCAGCGCTGGCTATTGCG
ATTCTTGCTTCACGCTCCAATCCCCAAGCTGGCCAGGCAGTGCTGGCCACCGCCCAGGCCAGCGCGATCCAGTCTCAACT
GAATTTCACCCGTAAGCATGAAAAGGAAGCAGATCGTGTCGGGTTTGGCATGCTCGTCAAAGCAGGATTCGATCCACATG
GCATGTCAACTTTCTTTGAGCGCATGCAACACGCCAGTCGTTACTATGAAAACGGGATTCCTTCATACCTCATGACTCAC
CCGGTTACCCATGAGCGTATCGCTGATATTCAGAATCGCACCCGGGAATTGGGCTACCGGCAGGTTCCGGACAGCCTGGA
ATTTCATCTGGTACGCGCCAAAATCCGCGCCTCCCGGGGTAACCCGGCTTCAATTGTCAGTGAATTCAAGGCACGTCTGC
AGGATAAACGCTATATTAACGAAATTGCTGAGCGATACGGACTGATTCAGGCGTTATTACGTGCCAAGCAATTCAAACAG
GCAGATGAGGAGTTAAATACACTTTACCGGACTATCCAATCCGATTCTTCTGCGCAGCCCCTAAGAAATCACCGCTTGGG
AAAACCCATCCAGGTGGAAGGTGATTATCTGCAATCGGCTGCTATGATTGAAACACTTGCTGCACGCGTTAAGTTTGCTG
ACGGACAAATCGACGATGCGTTCAAACTGTACCAGGCTGCACTACAATCTTTCCCGCATTATCGTGCGCTTGTTTATGAT
TATGTTGATGCACTACTGGAACACAAAGATGCGCAGACCGCGCTGAATTTTATCAATGAGCAATCCCGTTTCATTCATGA
TGATATCCGGCTTTACCGGCTGACGGCACAATGTCATGCTGCGCTGGGAAACGCCCTGTTGCAACATCAGGCTGAAGCTG
AAGCGCTGATCCGCGAGGGAAATCTCCGGGCAGCAATCGAACAGCTCCAGGTTGCACTACGTTATAAGCACGACAATTTT
TACCAACTATCCAGCGTGGAGGCCCGCTTGCGTCAAATCAAGGAGTTCGTGGCTGCCGAAGAGAAAAACAAATAA

Upstream 100 bases:

>100_bases
TATACAACAGGTGTTATCGTACTTGCGGCTGAAATCACAATCTGCTGTAACACAGGAACGGGAACAGGAACTCGATCTGT
CAGCGTTCGTCAAATACAGC

Downstream 100 bases:

>100_bases
GCACCTTTCAATGATTTGCATCTTCTGTTAAAACCCAGTCATCTGATATTTCTCATACGATAAAAAATATTACCCCCCTA
TGTTCAGTTCACGCGGAAGA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MKLHYLIIIVPLLFPAHIFGQELPDLGDVSQATVTPHQERQIGMQIMREIRADASYLDDPEITDYLARLGHRLISAAGQT
NSDNPFEFFAIDDSSINAFALPGGFVGFHSGLITAAQNESELAGVMAHEIAHVTQKHLARMLSGSSYLGIIGSIAALAIA
ILASRSNPQAGQAVLATAQASAIQSQLNFTRKHEKEADRVGFGMLVKAGFDPHGMSTFFERMQHASRYYENGIPSYLMTH
PVTHERIADIQNRTRELGYRQVPDSLEFHLVRAKIRASRGNPASIVSEFKARLQDKRYINEIAERYGLIQALLRAKQFKQ
ADEELNTLYRTIQSDSSAQPLRNHRLGKPIQVEGDYLQSAAMIETLAARVKFADGQIDDAFKLYQAALQSFPHYRALVYD
YVDALLEHKDAQTALNFINEQSRFIHDDIRLYRLTAQCHAALGNALLQHQAEAEALIREGNLRAAIEQLQVALRYKHDNF
YQLSSVEARLRQIKEFVAAEEKNK

Sequences:

>Translated_504_residues
MKLHYLIIIVPLLFPAHIFGQELPDLGDVSQATVTPHQERQIGMQIMREIRADASYLDDPEITDYLARLGHRLISAAGQT
NSDNPFEFFAIDDSSINAFALPGGFVGFHSGLITAAQNESELAGVMAHEIAHVTQKHLARMLSGSSYLGIIGSIAALAIA
ILASRSNPQAGQAVLATAQASAIQSQLNFTRKHEKEADRVGFGMLVKAGFDPHGMSTFFERMQHASRYYENGIPSYLMTH
PVTHERIADIQNRTRELGYRQVPDSLEFHLVRAKIRASRGNPASIVSEFKARLQDKRYINEIAERYGLIQALLRAKQFKQ
ADEELNTLYRTIQSDSSAQPLRNHRLGKPIQVEGDYLQSAAMIETLAARVKFADGQIDDAFKLYQAALQSFPHYRALVYD
YVDALLEHKDAQTALNFINEQSRFIHDDIRLYRLTAQCHAALGNALLQHQAEAEALIREGNLRAAIEQLQVALRYKHDNF
YQLSSVEARLRQIKEFVAAEEKNK
>Mature_504_residues
MKLHYLIIIVPLLFPAHIFGQELPDLGDVSQATVTPHQERQIGMQIMREIRADASYLDDPEITDYLARLGHRLISAAGQT
NSDNPFEFFAIDDSSINAFALPGGFVGFHSGLITAAQNESELAGVMAHEIAHVTQKHLARMLSGSSYLGIIGSIAALAIA
ILASRSNPQAGQAVLATAQASAIQSQLNFTRKHEKEADRVGFGMLVKAGFDPHGMSTFFERMQHASRYYENGIPSYLMTH
PVTHERIADIQNRTRELGYRQVPDSLEFHLVRAKIRASRGNPASIVSEFKARLQDKRYINEIAERYGLIQALLRAKQFKQ
ADEELNTLYRTIQSDSSAQPLRNHRLGKPIQVEGDYLQSAAMIETLAARVKFADGQIDDAFKLYQAALQSFPHYRALVYD
YVDALLEHKDAQTALNFINEQSRFIHDDIRLYRLTAQCHAALGNALLQHQAEAEALIREGNLRAAIEQLQVALRYKHDNF
YQLSSVEARLRQIKEFVAAEEKNK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=202, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1788840, Length=448, Percent_Identity=32.3660714285714, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI87082185, Length=228, Percent_Identity=25, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 56550; Mature: 56550

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHYLIIIVPLLFPAHIFGQELPDLGDVSQATVTPHQERQIGMQIMREIRADASYLDDP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
EITDYLARLGHRLISAAGQTNSDNPFEFFAIDDSSINAFALPGGFVGFHSGLITAAQNES
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCHHEECCCHH
ELAGVMAHEIAHVTQKHLARMLSGSSYLGIIGSIAALAIAILASRSNPQAGQAVLATAQA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SAIQSQLNFTRKHEKEADRVGFGMLVKAGFDPHGMSTFFERMQHASRYYENGIPSYLMTH
HHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC
PVTHERIADIQNRTRELGYRQVPDSLEFHLVRAKIRASRGNPASIVSEFKARLQDKRYIN
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EIAERYGLIQALLRAKQFKQADEELNTLYRTIQSDSSAQPLRNHRLGKPIQVEGDYLQSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEECCHHHHHH
AMIETLAARVKFADGQIDDAFKLYQAALQSFPHYRALVYDYVDALLEHKDAQTALNFINE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QSRFIHDDIRLYRLTAQCHAALGNALLQHQAEAEALIREGNLRAAIEQLQVALRYKHDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
YQLSSVEARLRQIKEFVAAEEKNK
CHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLHYLIIIVPLLFPAHIFGQELPDLGDVSQATVTPHQERQIGMQIMREIRADASYLDDP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
EITDYLARLGHRLISAAGQTNSDNPFEFFAIDDSSINAFALPGGFVGFHSGLITAAQNES
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCHHEECCCHH
ELAGVMAHEIAHVTQKHLARMLSGSSYLGIIGSIAALAIAILASRSNPQAGQAVLATAQA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SAIQSQLNFTRKHEKEADRVGFGMLVKAGFDPHGMSTFFERMQHASRYYENGIPSYLMTH
HHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC
PVTHERIADIQNRTRELGYRQVPDSLEFHLVRAKIRASRGNPASIVSEFKARLQDKRYIN
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EIAERYGLIQALLRAKQFKQADEELNTLYRTIQSDSSAQPLRNHRLGKPIQVEGDYLQSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEECCHHHHHH
AMIETLAARVKFADGQIDDAFKLYQAALQSFPHYRALVYDYVDALLEHKDAQTALNFINE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QSRFIHDDIRLYRLTAQCHAALGNALLQHQAEAEALIREGNLRAAIEQLQVALRYKHDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
YQLSSVEARLRQIKEFVAAEEKNK
CHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]