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The map label for this gene is yibP [H]

Identifier: 114330921

GI number: 114330921

Start: 945126

End: 946406

Strand: Reverse

Name: yibP [H]

Synonym: Neut_0918

Alternate gene names: 114330921

Gene position: 946406-945126 (Counterclockwise)

Preceding gene: 114330922

Following gene: 114330920

Centisome position: 35.57

GC content: 41.84

Gene sequence:

>1281_bases
ATGTTTGCTGGTTTCATTGCAGATTTCACATTAGCGCCACATTACTTCCCGGGGATAGGGAAGATATTATCCAGGACTGT
TTGTCTTCTGCTTTTAGTAAATATATTTTCATCTCCTCTGCTGTATGCGATTCCTCAAACCAATTTGGATAATCAAAAAC
AGCTGCATGATCTGCGCACTCGTATCGACGTCCTGCAAAAAGACCTGACTGATAAAAAATCTTCCAAGATCAGAGCAGCT
GATGCACTTCGTGATTCCGAACGATCAATAAGCGATCTGCACAACAAACTTTCCCAGCTTACGCGCCAGCAAAAAAACGC
ACAAGACAAGCTTGCCCGCTTACAAAAAAAATCAGCACAGCTCCGGGATAAAGCCAACGCCGGACAAACGCAGTTTGGAA
AGCTAATTTATTATCAGCACCTGACAAAACATAGGGAATATTTACAATTATTATTCAAGCAACAAGATCCAGGCAAAGCT
ACTCGTAACTTTTACTACTATAGATACATAGCACAGGCTCGCTCCAAAAATATCGATAATTTACGTAACCAGTTGGCTGA
TCTGGATACACTGGCTCATGCAAGCCGCATTCAAAATCAATCTCTTGAACAAATCCGGAACGAGCAGCTCCATCAAAAGC
AACAACTCGAACTGGAGAAAAATCGACGATCAGAAATCCTCGCATCACTCTCCAATGAGGTTTCTCGTCAGCAAAAAAAA
ATTGACGAACTGAAACAAGATGAACAGCGTCTTTCCAAGCTGATTGAGAAACTCAATAAACAGCTTGCTCGTAAAAAAAG
CACTCCCACAAAATCAAACAACAAAAACAATAAATCTGCATTGCGTAATAATAAATTACCTGATGCCATTGAACAAAAGG
GTTCTTTTGCTGCACTAAAAGGAAAGTTGCGACTACCCGTCCGGGGGGAGCTAACTAACCGCTTCGGCAGCCCGCGCGAA
AATGGTGGTATAAAATGGCAAGGATTGTTTATTCGTTCTTCAGGAGGCAATGAAGTCAAGGCCATTGCAAGTGGGGAAGT
TATATTTTCCGACTGGTTACGAGGGTTTGGAAATTTAATGATTTTGGATCATGGCAACCATTACATGAGCCTATACGGCA
ACAACGAAGCGATTTACAAACGGGTGGGCAATAAAGTTAAAAGTGGTGATACGATAGCAATAGTCGGCAACAGTGGTGGA
AATGCTGAATCAGGCTTGTATTTCGAACTCAGATATCAAGGCAAGCCTTTTGATCCACTGGGCTGGGTAAAAATAGAATA
G

Upstream 100 bases:

>100_bases
ATAACAACCTGAAACCACTAACGAACTACTACTTGGGTAATGACAGTGTAATTGGGGAAGCAATATCAGCTGTCGCGAAT
CAGGATAAAGCCGGAGCTTA

Downstream 100 bases:

>100_bases
CTTCAAAAAGCTGATAGTAAATATTTTAATAAGTACATATAAATTCTTCCGAAAAGATAAAGGGCAGAGCAAATACACCA
CATGCGTAATTTTATGAATA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MFAGFIADFTLAPHYFPGIGKILSRTVCLLLLVNIFSSPLLYAIPQTNLDNQKQLHDLRTRIDVLQKDLTDKKSSKIRAA
DALRDSERSISDLHNKLSQLTRQQKNAQDKLARLQKKSAQLRDKANAGQTQFGKLIYYQHLTKHREYLQLLFKQQDPGKA
TRNFYYYRYIAQARSKNIDNLRNQLADLDTLAHASRIQNQSLEQIRNEQLHQKQQLELEKNRRSEILASLSNEVSRQQKK
IDELKQDEQRLSKLIEKLNKQLARKKSTPTKSNNKNNKSALRNNKLPDAIEQKGSFAALKGKLRLPVRGELTNRFGSPRE
NGGIKWQGLFIRSSGGNEVKAIASGEVIFSDWLRGFGNLMILDHGNHYMSLYGNNEAIYKRVGNKVKSGDTIAIVGNSGG
NAESGLYFELRYQGKPFDPLGWVKIE

Sequences:

>Translated_426_residues
MFAGFIADFTLAPHYFPGIGKILSRTVCLLLLVNIFSSPLLYAIPQTNLDNQKQLHDLRTRIDVLQKDLTDKKSSKIRAA
DALRDSERSISDLHNKLSQLTRQQKNAQDKLARLQKKSAQLRDKANAGQTQFGKLIYYQHLTKHREYLQLLFKQQDPGKA
TRNFYYYRYIAQARSKNIDNLRNQLADLDTLAHASRIQNQSLEQIRNEQLHQKQQLELEKNRRSEILASLSNEVSRQQKK
IDELKQDEQRLSKLIEKLNKQLARKKSTPTKSNNKNNKSALRNNKLPDAIEQKGSFAALKGKLRLPVRGELTNRFGSPRE
NGGIKWQGLFIRSSGGNEVKAIASGEVIFSDWLRGFGNLMILDHGNHYMSLYGNNEAIYKRVGNKVKSGDTIAIVGNSGG
NAESGLYFELRYQGKPFDPLGWVKIE
>Mature_426_residues
MFAGFIADFTLAPHYFPGIGKILSRTVCLLLLVNIFSSPLLYAIPQTNLDNQKQLHDLRTRIDVLQKDLTDKKSSKIRAA
DALRDSERSISDLHNKLSQLTRQQKNAQDKLARLQKKSAQLRDKANAGQTQFGKLIYYQHLTKHREYLQLLFKQQDPGKA
TRNFYYYRYIAQARSKNIDNLRNQLADLDTLAHASRIQNQSLEQIRNEQLHQKQQLELEKNRRSEILASLSNEVSRQQKK
IDELKQDEQRLSKLIEKLNKQLARKKSTPTKSNNKNNKSALRNNKLPDAIEQKGSFAALKGKLRLPVRGELTNRFGSPRE
NGGIKWQGLFIRSSGGNEVKAIASGEVIFSDWLRGFGNLMILDHGNHYMSLYGNNEAIYKRVGNKVKSGDTIAIVGNSGG
NAESGLYFELRYQGKPFDPLGWVKIE

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=430, Percent_Identity=27.906976744186, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=38.135593220339, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082174, Length=156, Percent_Identity=29.4871794871795, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 48606; Mature: 48606

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEC
>Mature Secondary Structure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CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]