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The map label for this gene is ctpA [H]

Identifier: 114330920

GI number: 114330920

Start: 943614

End: 945044

Strand: Reverse

Name: ctpA [H]

Synonym: Neut_0917

Alternate gene names: 114330920

Gene position: 945044-943614 (Counterclockwise)

Preceding gene: 114330921

Following gene: 114330919

Centisome position: 35.51

GC content: 44.86

Gene sequence:

>1431_bases
ATGCGTAATTTTATGAATAAAATCAGTTTAGTCTTTGTCGGCATCATTGCCGGGGTCATGGTCAGTTTGAACTTCTCCGC
CATTGCTGATAAGGAAATCAAGCAAGAATTGCAAACACTCCCGATTGAGGAGTTGCGCACATTTTCACAAGTCTTCGGGC
GTATCAAGAGTGACTACGTTGAGCCTGTTGAAGACAAGAAACTGATCACCGAGGCGATTAATGGAATGCTGGTCGGACTG
GATCCGCACTCGGCTTTCCTGGACAGTGAAGAGTACAAAGAACTGCAAATCGGGACGCAAGGGGAATTTGGCGGATTAGG
CATACAGGTAACAATGGAAGATGGGCTGGTCAAAGTCATTTCCCCGATTGAAGATACACCCGCATACCGTGCGGGCATCA
AAACCGGTGATCTCATCATAAAAATTGATGATACAGCTGTTAAAGGCATGACACTCAACGACGCCATTAAACGGATGCGC
GGGAAACCAGATACTTCGATTGCACTCACCATTATTCGTGAAGGGGAAGCTGAACCCCTCATATTCACGCTTGTTCGAGA
TGTGATCAAAATTGAGAGTGTCAAATCCAAACTCATTGAACCGGGTTACGCCTATGTACGCATTACCCAGTTCCAGGAGC
GTACGGGAGAAAATCTGGCTGAAGCCATTACCAAGCTTTACAGTGAAAGCAAGGTTCCCATGAAAGGCATGGTGCTGGAT
TTAAGAAATGACCCAGGTGGTTTACTGAATAGTGCGGTAGCAGTCTCAGCTGCTTTCCTGCCAAGTAATGCACTGGTAGT
TTATACAGAGGGACGTACCAATGACGCCAAAATGCAACTTCGTGCAAACCCCGAATATTATCTCCGCAGTACTGGTCGCG
ATTTTCTAGCAGGTTTGCCGCAGAGTATCAAGACCATACCAATGATAACGTTGGTTAATGGTGGCTCTGCTTCCGCATCG
GAAATCGTTGCAGGTGCGTTGCAGGATTATAAACGCTCCATCATCATGGGCTCCCAAACCTTTGGCAAGGGATCGGTACA
AACCATCTTGCCTCTTAGCAATAACACTGCCATTAAGCTAACAACAGCGCGCTATTACACGCCTAATGGTCAGTCGATAC
AGGCTAAAGGTATCACGCCGGATATATTGGATGAAGATACTGATAACAACTCTCGTCTGTTAAGAGAAGTTGATCTCAAC
CGCCATTTAAACAATAATCAAGAAGAAAGTACCGGTAAGAAATCAACCCTCAAGAAAAAAGGTACTGAATCTTCCAAAGA
ATCAAAGAATAAGACAAACAAGAAACCAATAAATCATGAGCCTATGGAATTCGGATCCAGTGATGACCAGCTGTTGACCA
AAGCAATTAATCACCTGAAATCCATGTCTCAAAAATCCAAACACAAAACAGCCAAGGCAACGAAAGGCTAA

Upstream 100 bases:

>100_bases
CTGGGTAAAAATAGAATAGCTTCAAAAAGCTGATAGTAAATATTTTAATAAGTACATATAAATTCTTCCGAAAAGATAAA
GGGCAGAGCAAATACACCAC

Downstream 100 bases:

>100_bases
TTCATTCCGAACAAGGTGGCGGAGCAACGTGGATGATCAACAACTGTTACGTTACAGCCGCCACATTTTGTTACCGGAAA
TTGATTTTTCCGGTCAAACA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MRNFMNKISLVFVGIIAGVMVSLNFSAIADKEIKQELQTLPIEELRTFSQVFGRIKSDYVEPVEDKKLITEAINGMLVGL
DPHSAFLDSEEYKELQIGTQGEFGGLGIQVTMEDGLVKVISPIEDTPAYRAGIKTGDLIIKIDDTAVKGMTLNDAIKRMR
GKPDTSIALTIIREGEAEPLIFTLVRDVIKIESVKSKLIEPGYAYVRITQFQERTGENLAEAITKLYSESKVPMKGMVLD
LRNDPGGLLNSAVAVSAAFLPSNALVVYTEGRTNDAKMQLRANPEYYLRSTGRDFLAGLPQSIKTIPMITLVNGGSASAS
EIVAGALQDYKRSIIMGSQTFGKGSVQTILPLSNNTAIKLTTARYYTPNGQSIQAKGITPDILDEDTDNNSRLLREVDLN
RHLNNNQEESTGKKSTLKKKGTESSKESKNKTNKKPINHEPMEFGSSDDQLLTKAINHLKSMSQKSKHKTAKATKG

Sequences:

>Translated_476_residues
MRNFMNKISLVFVGIIAGVMVSLNFSAIADKEIKQELQTLPIEELRTFSQVFGRIKSDYVEPVEDKKLITEAINGMLVGL
DPHSAFLDSEEYKELQIGTQGEFGGLGIQVTMEDGLVKVISPIEDTPAYRAGIKTGDLIIKIDDTAVKGMTLNDAIKRMR
GKPDTSIALTIIREGEAEPLIFTLVRDVIKIESVKSKLIEPGYAYVRITQFQERTGENLAEAITKLYSESKVPMKGMVLD
LRNDPGGLLNSAVAVSAAFLPSNALVVYTEGRTNDAKMQLRANPEYYLRSTGRDFLAGLPQSIKTIPMITLVNGGSASAS
EIVAGALQDYKRSIIMGSQTFGKGSVQTILPLSNNTAIKLTTARYYTPNGQSIQAKGITPDILDEDTDNNSRLLREVDLN
RHLNNNQEESTGKKSTLKKKGTESSKESKNKTNKKPINHEPMEFGSSDDQLLTKAINHLKSMSQKSKHKTAKATKG
>Mature_476_residues
MRNFMNKISLVFVGIIAGVMVSLNFSAIADKEIKQELQTLPIEELRTFSQVFGRIKSDYVEPVEDKKLITEAINGMLVGL
DPHSAFLDSEEYKELQIGTQGEFGGLGIQVTMEDGLVKVISPIEDTPAYRAGIKTGDLIIKIDDTAVKGMTLNDAIKRMR
GKPDTSIALTIIREGEAEPLIFTLVRDVIKIESVKSKLIEPGYAYVRITQFQERTGENLAEAITKLYSESKVPMKGMVLD
LRNDPGGLLNSAVAVSAAFLPSNALVVYTEGRTNDAKMQLRANPEYYLRSTGRDFLAGLPQSIKTIPMITLVNGGSASAS
EIVAGALQDYKRSIIMGSQTFGKGSVQTILPLSNNTAIKLTTARYYTPNGQSIQAKGITPDILDEDTDNNSRLLREVDLN
RHLNNNQEESTGKKSTLKKKGTESSKESKNKTNKKPINHEPMEFGSSDDQLLTKAINHLKSMSQKSKHKTAKATKG

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=395, Percent_Identity=27.0886075949367, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52234; Mature: 52234

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFMNKISLVFVGIIAGVMVSLNFSAIADKEIKQELQTLPIEELRTFSQVFGRIKSDYV
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
EPVEDKKLITEAINGMLVGLDPHSAFLDSEEYKELQIGTQGEFGGLGIQVTMEDGLVKVI
CCCHHHHHHHHHHCCEEEEECCHHHHCCCHHHHHEECCCCCCCCCEEEEEEECCCEEEEC
SPIEDTPAYRAGIKTGDLIIKIDDTAVKGMTLNDAIKRMRGKPDTSIALTIIREGEAEPL
CCCCCCCHHHCCCCCCCEEEEECCCEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCH
IFTLVRDVIKIESVKSKLIEPGYAYVRITQFQERTGENLAEAITKLYSESKVPMKGMVLD
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
LRNDPGGLLNSAVAVSAAFLPSNALVVYTEGRTNDAKMQLRANPEYYLRSTGRDFLAGLP
ECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCHHHHCCC
QSIKTIPMITLVNGGSASASEIVAGALQDYKRSIIMGSQTFGKGSVQTILPLSNNTAIKL
HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEEEE
TTARYYTPNGQSIQAKGITPDILDEDTDNNSRLLREVDLNRHLNNNQEESTGKKSTLKKK
EEEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHC
GTESSKESKNKTNKKPINHEPMEFGSSDDQLLTKAINHLKSMSQKSKHKTAKATKG
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRNFMNKISLVFVGIIAGVMVSLNFSAIADKEIKQELQTLPIEELRTFSQVFGRIKSDYV
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
EPVEDKKLITEAINGMLVGLDPHSAFLDSEEYKELQIGTQGEFGGLGIQVTMEDGLVKVI
CCCHHHHHHHHHHCCEEEEECCHHHHCCCHHHHHEECCCCCCCCCEEEEEEECCCEEEEC
SPIEDTPAYRAGIKTGDLIIKIDDTAVKGMTLNDAIKRMRGKPDTSIALTIIREGEAEPL
CCCCCCCHHHCCCCCCCEEEEECCCEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCH
IFTLVRDVIKIESVKSKLIEPGYAYVRITQFQERTGENLAEAITKLYSESKVPMKGMVLD
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
LRNDPGGLLNSAVAVSAAFLPSNALVVYTEGRTNDAKMQLRANPEYYLRSTGRDFLAGLP
ECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCHHHHCCC
QSIKTIPMITLVNGGSASASEIVAGALQDYKRSIIMGSQTFGKGSVQTILPLSNNTAIKL
HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEEEE
TTARYYTPNGQSIQAKGITPDILDEDTDNNSRLLREVDLNRHLNNNQEESTGKKSTLKKK
EEEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHC
GTESSKESKNKTNKKPINHEPMEFGSSDDQLLTKAINHLKSMSQKSKHKTAKATKG
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]