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The map label for this gene is 114330632

Identifier: 114330632

GI number: 114330632

Start: 627628

End: 627945

Strand: Reverse

Name: 114330632

Synonym: Neut_0617

Alternate gene names: NA

Gene position: 627945-627628 (Counterclockwise)

Preceding gene: 114330633

Following gene: 114330631

Centisome position: 23.6

GC content: 49.69

Gene sequence:

>318_bases
ATGCCGATCTATGAGTATGCCTGCCATGCATGTGGATTGGAAAAGGAGTATCTACAGAAAATGAGTGATGCTCCGATCGC
AAAGTGCCCTTCCTGCGGCAGCACTGATTATGTCAAGAAAGTTTCTGCTGCAGGTTTCCAGCTGAAGGGAACTGGATGGT
ATGTAACAGATTTCAGAAACAAGAATACTGGCAGACCGGATTCAAAACCAAAAGAGGAATCCGGCACGGAAACTACCAGC
ACCGATAAGACTGCTGCAAATACCGCGGCGACAACACCGACCACAACCACCGTGCCGTCTGCGCCTGCTACAGACTAG

Upstream 100 bases:

>100_bases
AGGCTGATACAGCCCGCGATCAGGCAAAGCCACCCGGGAAATTGCTCTGGCAGTCAAGTATAATGCCGTTTTCAAAGACT
TTATTTAAAGGAGAAAAAGC

Downstream 100 bases:

>100_bases
CAGGATTTTTACACAGCAAGGTTATCTGAACCGTTTTTTCATTCAATCAACATTAACGTCACTTATGCGTACTGACTATT
GCGGCGCCATCAACACACGT

Product: putative regulatory protein, FmdB family protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPIYEYACHACGLEKEYLQKMSDAPIAKCPSCGSTDYVKKVSAAGFQLKGTGWYVTDFRNKNTGRPDSKPKEESGTETTS
TDKTAANTAATTPTTTTVPSAPATD

Sequences:

>Translated_105_residues
MPIYEYACHACGLEKEYLQKMSDAPIAKCPSCGSTDYVKKVSAAGFQLKGTGWYVTDFRNKNTGRPDSKPKEESGTETTS
TDKTAANTAATTPTTTTVPSAPATD
>Mature_104_residues
PIYEYACHACGLEKEYLQKMSDAPIAKCPSCGSTDYVKKVSAAGFQLKGTGWYVTDFRNKNTGRPDSKPKEESGTETTST
DKTAANTAATTPTTTTVPSAPATD

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11191; Mature: 11060

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYEYACHACGLEKEYLQKMSDAPIAKCPSCGSTDYVKKVSAAGFQLKGTGWYVTDFRN
CCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCC
KNTGRPDSKPKEESGTETTSTDKTAANTAATTPTTTTVPSAPATD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYEYACHACGLEKEYLQKMSDAPIAKCPSCGSTDYVKKVSAAGFQLKGTGWYVTDFRN
CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCC
KNTGRPDSKPKEESGTETTSTDKTAANTAATTPTTTTVPSAPATD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA