The gene/protein map for NC_005773 is currently unavailable.
Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113969861

Identifier: 113969861

GI number: 113969861

Start: 1787129

End: 1787728

Strand: Direct

Name: 113969861

Synonym: Shewmr4_1519

Alternate gene names: NA

Gene position: 1787129-1787728 (Clockwise)

Preceding gene: 113969860

Following gene: 113969864

Centisome position: 37.97

GC content: 49.0

Gene sequence:

>600_bases
ATGCCATTACCGTTACTTTGGCTTGGCAGTGCAGCAATGGGCGCGTTATTGCTCGCCGATGAGCGTGAAAAGCGTCAACA
GCTTGAGCGTGACCGCCTATTAGGCAGAGCGCCACGGCAAGCGAGTGCCAACCAAGCCATGGTTGCAGCACCCAGCCAGT
GGCAGAAGGGCTTTAAACAAGTCTCGCCGCAGCCTGGAAGCATTGTTTGCTGCTATGTGTTTGGGGTCATTGAACATACT
GGCATTTGGTTGGCGGATGATTGCCTTATCGAGCTACATGGCTCAGGGCTGATAAGGGCGGTATCGGTAAAACGGTTTCT
AGCGGGGCGTACTGGTAGCCAAATCTATATTGCCTGCAATCATCAACATCAACCACTGATTGCCAGTGATATGGTGAGCC
GTGCCGAGCGGGCCATTTATCAATACCGTGAATATGATTTGTTCGACAACAACTGCCATCGATTCGTCTGGTCATGTTTG
TGTGGTGAAGAGGTTGCCATAAAAAGCTTTAATGAATTAAATCAAAAACTCGCGGGCTATTTTAAGCAGGGGATTTACTG
GGATGAAATGCGTCGAGTCCCTGAAGAGATAAAAATGTAA

Upstream 100 bases:

>100_bases
TTCAAAGGGTAAGATTCACTGGTTTTAAAGGTGCCGTCTTTGAGGTAAACGGTCTAAAGACGAGTTTTATTAAAGGTGAT
TGTTGCCATAAGGGGATGAT

Downstream 100 bases:

>100_bases
AAGGCCATCCGAAGATGGCCTTTGAGCCCTGTTAGCGGGATAAATTACTTACAGAAATAATCCACAGCACGTTTAACCAG
CTCAATACCACTTAGCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPLPLLWLGSAAMGALLLADEREKRQQLERDRLLGRAPRQASANQAMVAAPSQWQKGFKQVSPQPGSIVCCYVFGVIEHT
GIWLADDCLIELHGSGLIRAVSVKRFLAGRTGSQIYIACNHQHQPLIASDMVSRAERAIYQYREYDLFDNNCHRFVWSCL
CGEEVAIKSFNELNQKLAGYFKQGIYWDEMRRVPEEIKM

Sequences:

>Translated_199_residues
MPLPLLWLGSAAMGALLLADEREKRQQLERDRLLGRAPRQASANQAMVAAPSQWQKGFKQVSPQPGSIVCCYVFGVIEHT
GIWLADDCLIELHGSGLIRAVSVKRFLAGRTGSQIYIACNHQHQPLIASDMVSRAERAIYQYREYDLFDNNCHRFVWSCL
CGEEVAIKSFNELNQKLAGYFKQGIYWDEMRRVPEEIKM
>Mature_198_residues
PLPLLWLGSAAMGALLLADEREKRQQLERDRLLGRAPRQASANQAMVAAPSQWQKGFKQVSPQPGSIVCCYVFGVIEHTG
IWLADDCLIELHGSGLIRAVSVKRFLAGRTGSQIYIACNHQHQPLIASDMVSRAERAIYQYREYDLFDNNCHRFVWSCLC
GEEVAIKSFNELNQKLAGYFKQGIYWDEMRRVPEEIKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22647; Mature: 22516

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLWLGSAAMGALLLADEREKRQQLERDRLLGRAPRQASANQAMVAAPSQWQKGFKQ
CCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH
VSPQPGSIVCCYVFGVIEHTGIWLADDCLIELHGSGLIRAVSVKRFLAGRTGSQIYIACN
CCCCCCCEEHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
HQHQPLIASDMVSRAERAIYQYREYDLFDNNCHRFVWSCLCGEEVAIKSFNELNQKLAGY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FKQGIYWDEMRRVPEEIKM
HHHCCCHHHHHCCHHHHCC
>Mature Secondary Structure 
PLPLLWLGSAAMGALLLADEREKRQQLERDRLLGRAPRQASANQAMVAAPSQWQKGFKQ
CCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH
VSPQPGSIVCCYVFGVIEHTGIWLADDCLIELHGSGLIRAVSVKRFLAGRTGSQIYIACN
CCCCCCCEEHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
HQHQPLIASDMVSRAERAIYQYREYDLFDNNCHRFVWSCLCGEEVAIKSFNELNQKLAGY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FKQGIYWDEMRRVPEEIKM
HHHCCCHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA