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The map label for this gene is spsC [H]

Identifier: 113969664

GI number: 113969664

Start: 1531231

End: 1532340

Strand: Direct

Name: spsC [H]

Synonym: Shewmr4_1321

Alternate gene names: 113969664

Gene position: 1531231-1532340 (Clockwise)

Preceding gene: 113969663

Following gene: 113969665

Centisome position: 32.54

GC content: 43.78

Gene sequence:

>1110_bases
ATGACGAATAAAACAATTCCTGTCACCCAGCCATTTTTGCCAGAATTAAGCGAATTTATGCCTTATCTTGAACAAATTTG
GGATAATCGCTGGCTGACCAACAATGGCCCGTTTCATCAAGAATTAGAAGCCAAGTTGGCTGAATATTTGGGTGTTGAGC
ATGTCTCTTTATTTAATAATGCCACTATTGCGCTCATCACCGCCTTGCAGGCGATGCGCATTCACGGCGAGGTGATTACC
ACTCCCTATTCGTTTGTGGCAACCAGCCATTCGATCATGTGGAATGGCTTAGAGCCAGTGTTTGTCGATATTCATCCAAC
CACTTTTAATATTGATCCTGCCAAGATAGAAGCAGCGATTACTCCACGCACCACTGCCATTATGCCGGTCCATTGCTACT
CCAATCCGTGTGATGTTGAGGCTATTCAAAAAATTGCCGATAACTATGGCCTTAAGGTAATTTATGATGCGGCTCATGCT
TTTGGGGTCAATTATAAAGGTGAGAGTTTACTTAAATGGGGTGACCTGTCGATTTTAAGCTTTCACGCCACCAAGGTATT
TAATACCTTCGAAGGTGGAGCGATCATCAGCCCAGATGCCAAAACCAAGCAACGTATTGACCGCTTAAAAAACTTTGGTA
TCGCCGATGAGCTAACAGTAACAGCGCCTGGCATTAACGGTAAAATGAGTGAAATTAATGCCGCCTTTGGTTTAGTGCAG
CTGAAACATATTGATGATGCAATGGCGCAGCGCCAAGCCGTCGATTCGCGTTACCGCTGTGAGCTTGCTGAGGTAACGGG
CATTACCCTGTATCAGCATGATATCAATGCTAATAGCAACTTCTCTTACTTCCCTATCTTAGTGGAGGCAGAATACCCTC
TCAGCCGCGATGAGCTATACGAAAAGCTAAAAGCTAATGGTATTTTATCGCGCCGTTATTTTTACCCGCTTATTAGCAAT
ATGCCTATGTATCGGGGTTTACCAACTGCCGATACTGTTCATTTACCTCTGGCCAATGCATTGGCTGAAAAGGTATTGTG
TTTGCCGATTTTCAATGAGCTAACTGTTGAACAGCAGCAACAGGTTATTGCATTAATTAAAGGGAGTTAG

Upstream 100 bases:

>100_bases
GTATGGCATGTATTTAGTATTGGCACAAAAGCCACTGCTGTTGCAACTGCGCAGTATCTTGCGCCGCTAGTGGTTTAATT
ATTTTACTTTGGATATAAAC

Downstream 100 bases:

>100_bases
TCAGATGGCGTTTTTAACTGAAAAGCAATTAAATGAAATAGGGTTTGCATCTCTGGGCCATAATGTGCAGATCTCGGATA
AAGCTTCCATTTATGGTGCC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTNKTIPVTQPFLPELSEFMPYLEQIWDNRWLTNNGPFHQELEAKLAEYLGVEHVSLFNNATIALITALQAMRIHGEVIT
TPYSFVATSHSIMWNGLEPVFVDIHPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQKIADNYGLKVIYDAAHA
FGVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
LKHIDDAMAQRQAVDSRYRCELAEVTGITLYQHDINANSNFSYFPILVEAEYPLSRDELYEKLKANGILSRRYFYPLISN
MPMYRGLPTADTVHLPLANALAEKVLCLPIFNELTVEQQQQVIALIKGS

Sequences:

>Translated_369_residues
MTNKTIPVTQPFLPELSEFMPYLEQIWDNRWLTNNGPFHQELEAKLAEYLGVEHVSLFNNATIALITALQAMRIHGEVIT
TPYSFVATSHSIMWNGLEPVFVDIHPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQKIADNYGLKVIYDAAHA
FGVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
LKHIDDAMAQRQAVDSRYRCELAEVTGITLYQHDINANSNFSYFPILVEAEYPLSRDELYEKLKANGILSRRYFYPLISN
MPMYRGLPTADTVHLPLANALAEKVLCLPIFNELTVEQQQQVIALIKGS
>Mature_368_residues
TNKTIPVTQPFLPELSEFMPYLEQIWDNRWLTNNGPFHQELEAKLAEYLGVEHVSLFNNATIALITALQAMRIHGEVITT
PYSFVATSHSIMWNGLEPVFVDIHPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQKIADNYGLKVIYDAAHAF
GVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQL
KHIDDAMAQRQAVDSRYRCELAEVTGITLYQHDINANSNFSYFPILVEAEYPLSRDELYEKLKANGILSRRYFYPLISNM
PMYRGLPTADTVHLPLANALAEKVLCLPIFNELTVEQQQQVIALIKGS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=31.1345646437995, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI2367285, Length=384, Percent_Identity=28.90625, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41324; Mature: 41193

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKTIPVTQPFLPELSEFMPYLEQIWDNRWLTNNGPFHQELEAKLAEYLGVEHVSLFNN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHCC
ATIALITALQAMRIHGEVITTPYSFVATSHSIMWNGLEPVFVDIHPTTFNIDPAKIEAAI
CHHHHHHHHHHHHHCCEEEECCHHHHHCCCEEEECCCCEEEEEEECCEECCCHHHEEEEE
TPRTTAIMPVHCYSNPCDVEAIQKIADNYGLKVIYDAAHAFGVNYKGESLLKWGDLSILS
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCEEEECCCEEEE
FHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
EEHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHEE
LKHIDDAMAQRQAVDSRYRCELAEVTGITLYQHDINANSNFSYFPILVEAEYPLSRDELY
EHHHHHHHHHHHHHCHHHHEEEEHHCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHH
EKLKANGILSRRYFYPLISNMPMYRGLPTADTVHLPLANALAEKVLCLPIFNELTVEQQQ
HHHHHCCEEHHHHHHHHHHCCCHHCCCCCCCEEECCHHHHHHHHEEEEECHHHHHHHHHH
QVIALIKGS
HEEEEEECC
>Mature Secondary Structure 
TNKTIPVTQPFLPELSEFMPYLEQIWDNRWLTNNGPFHQELEAKLAEYLGVEHVSLFNN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHCC
ATIALITALQAMRIHGEVITTPYSFVATSHSIMWNGLEPVFVDIHPTTFNIDPAKIEAAI
CHHHHHHHHHHHHHCCEEEECCHHHHHCCCEEEECCCCEEEEEEECCEECCCHHHEEEEE
TPRTTAIMPVHCYSNPCDVEAIQKIADNYGLKVIYDAAHAFGVNYKGESLLKWGDLSILS
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCEEEECCCEEEE
FHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
EEHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHEE
LKHIDDAMAQRQAVDSRYRCELAEVTGITLYQHDINANSNFSYFPILVEAEYPLSRDELY
EHHHHHHHHHHHHHCHHHHEEEEHHCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHH
EKLKANGILSRRYFYPLISNMPMYRGLPTADTVHLPLANALAEKVLCLPIFNELTVEQQQ
HHHHHCCEEHHHHHHHHHHCCCHHCCCCCCCEEECCHHHHHHHHEEEEECHHHHHHHHHH
QVIALIKGS
HEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]