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The map label for this gene is tuaB [H]

Identifier: 113969663

GI number: 113969663

Start: 1529773

End: 1531200

Strand: Direct

Name: tuaB [H]

Synonym: Shewmr4_1320

Alternate gene names: 113969663

Gene position: 1529773-1531200 (Clockwise)

Preceding gene: 113969662

Following gene: 113969664

Centisome position: 32.5

GC content: 43.98

Gene sequence:

>1428_bases
ATGATCGATCTTGCGAGTAAAACTAAAAAAGGTCTGCAATGGAGCGCCTTGGAACGATTTTTAACCCAAGGTATTCAACT
CGCAATTACCTTATATTTGGCAAGATTATTAGGGCCAACTGCTTTTGGCTTAGTGGGCATGCTGGCAGTGTTCATTGCCA
TTGCTAATGTATTTGTCGATAGTGGTTTTACTTCGGCGTTAATTCGTAAAACAGATCGCACAGAAAGTGACTTAGTAACC
GCCTTTTATTACAACATTGTCATGGCGGGTTTGTGCTACTTTGCTTTGTATATCAGCGCGCCTTTGGTTGCCGATTTTTA
TCAACAAGCCGAGCTGCAAACCCTGCTGCGGATATTGGGCTTAGTTGTGCTGATCAACGCATTTACGTTAATTCCGCGCG
TTAAGCTTAATGTGGTGATGGATTTTAAAACCCAAGCCAAAATATCGGTACTCAGTGTGCTGATCAGTGGGTCAGCAGCG
ATAATATTAGCAACTAACGGCTATGGCGTATGGGCGTTGGTGACGCAAACCTTGCTCAATGCCAGCTGTGCTACCTTTTT
ATTCAATCTGTTTGCTCCTTGGTTACCGCGTGGCCGCATTACTAAGCACGCTTTTAATTATCTGTTTGGTTATGGTAGTA
AATTGTTGTTATCTGGCTTATTGGATGTTATCTACAACAATCTGTATCAAATCATTATTGGCAAAAAATTTAGCCCTGCC
GTGGTGGGGCAATTTACTCAAGCCAATCAATTAGCCAGTGTGCCTGTGTCGACGCTTACGGGCATCATTCAGCGCGTTAC
TTTCCCGCTGTTTAGCCAGTTACAAGACGATCCAGATAAAATGGCAAACGCCTATCGCCAAACCTTAAAATTGTCGGCGC
TAGTGATCTTCCCGTTGATTGTTGCGTTAGGGTTGATTGCCAAGCCGTTGTTTACCAGCCTATTAGGCGAGCAGTGGCAG
GGGGCCGCAGCGCTGCTTAGTGTGCTGTGTTTGGGCTATATGTTATACCCGATCCATTCTATTAATTTGAATTTGTTGCA
AGTCACTGGCCGCAGTGATCTGTTTTTAAAGCTTGAGGTGATGAAAAAAGTTATTGGCGTGACTGTGCTGCTGTTGAGCA
TTCCTTATGGTGTGCTGGCGATGTGCCTCGGTTTTACCCTGACTTCCTATTTAGCTTTGCTACTTAACACCTATTACACA
GCTAAGTTAACGCATTTAAGCCAATGGCAACAATGTAAAGATATTTTACCTATTTGGCTTGCGGTGATTTTTGCTGCTGC
CGTTGGATATGGCGCCGGTTTATATTTTCTACAATCCTGGTTGCAAATAGCGGTTAACTTGAGCGTAGCCTTATTGATGT
ATGGCATGTATTTAGTATTGGCACAAAAGCCACTGCTGTTGCAACTGCGCAGTATCTTGCGCCGCTAG

Upstream 100 bases:

>100_bases
AGCATTGGCTAACTGAAGAGCAGTTAATGGCGCGCGGCGAGTTGATGAGCAAAAACAGTTATGGCCAATATCTGTTAACC
TTAGCTAAACCCTAATCGCT

Downstream 100 bases:

>100_bases
TGGTTTAATTATTTTACTTTGGATATAAACATGACGAATAAAACAATTCCTGTCACCCAGCCATTTTTGCCAGAATTAAG
CGAATTTATGCCTTATCTTG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MIDLASKTKKGLQWSALERFLTQGIQLAITLYLARLLGPTAFGLVGMLAVFIAIANVFVDSGFTSALIRKTDRTESDLVT
AFYYNIVMAGLCYFALYISAPLVADFYQQAELQTLLRILGLVVLINAFTLIPRVKLNVVMDFKTQAKISVLSVLISGSAA
IILATNGYGVWALVTQTLLNASCATFLFNLFAPWLPRGRITKHAFNYLFGYGSKLLLSGLLDVIYNNLYQIIIGKKFSPA
VVGQFTQANQLASVPVSTLTGIIQRVTFPLFSQLQDDPDKMANAYRQTLKLSALVIFPLIVALGLIAKPLFTSLLGEQWQ
GAAALLSVLCLGYMLYPIHSINLNLLQVTGRSDLFLKLEVMKKVIGVTVLLLSIPYGVLAMCLGFTLTSYLALLLNTYYT
AKLTHLSQWQQCKDILPIWLAVIFAAAVGYGAGLYFLQSWLQIAVNLSVALLMYGMYLVLAQKPLLLQLRSILRR

Sequences:

>Translated_475_residues
MIDLASKTKKGLQWSALERFLTQGIQLAITLYLARLLGPTAFGLVGMLAVFIAIANVFVDSGFTSALIRKTDRTESDLVT
AFYYNIVMAGLCYFALYISAPLVADFYQQAELQTLLRILGLVVLINAFTLIPRVKLNVVMDFKTQAKISVLSVLISGSAA
IILATNGYGVWALVTQTLLNASCATFLFNLFAPWLPRGRITKHAFNYLFGYGSKLLLSGLLDVIYNNLYQIIIGKKFSPA
VVGQFTQANQLASVPVSTLTGIIQRVTFPLFSQLQDDPDKMANAYRQTLKLSALVIFPLIVALGLIAKPLFTSLLGEQWQ
GAAALLSVLCLGYMLYPIHSINLNLLQVTGRSDLFLKLEVMKKVIGVTVLLLSIPYGVLAMCLGFTLTSYLALLLNTYYT
AKLTHLSQWQQCKDILPIWLAVIFAAAVGYGAGLYFLQSWLQIAVNLSVALLMYGMYLVLAQKPLLLQLRSILRR
>Mature_475_residues
MIDLASKTKKGLQWSALERFLTQGIQLAITLYLARLLGPTAFGLVGMLAVFIAIANVFVDSGFTSALIRKTDRTESDLVT
AFYYNIVMAGLCYFALYISAPLVADFYQQAELQTLLRILGLVVLINAFTLIPRVKLNVVMDFKTQAKISVLSVLISGSAA
IILATNGYGVWALVTQTLLNASCATFLFNLFAPWLPRGRITKHAFNYLFGYGSKLLLSGLLDVIYNNLYQIIIGKKFSPA
VVGQFTQANQLASVPVSTLTGIIQRVTFPLFSQLQDDPDKMANAYRQTLKLSALVIFPLIVALGLIAKPLFTSLLGEQWQ
GAAALLSVLCLGYMLYPIHSINLNLLQVTGRSDLFLKLEVMKKVIGVTVLLLSIPYGVLAMCLGFTLTSYLALLLNTYYT
AKLTHLSQWQQCKDILPIWLAVIFAAAVGYGAGLYFLQSWLQIAVNLSVALLMYGMYLVLAQKPLLLQLRSILRR

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=487, Percent_Identity=23.6139630390144, Blast_Score=131, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 52357; Mature: 52357

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLASKTKKGLQWSALERFLTQGIQLAITLYLARLLGPTAFGLVGMLAVFIAIANVFVD
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SGFTSALIRKTDRTESDLVTAFYYNIVMAGLCYFALYISAPLVADFYQQAELQTLLRILG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVLINAFTLIPRVKLNVVMDFKTQAKISVLSVLISGSAAIILATNGYGVWALVTQTLLN
HHHHHHHHHHHCCHHEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
ASCATFLFNLFAPWLPRGRITKHAFNYLFGYGSKLLLSGLLDVIYNNLYQIIIGKKFSPA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VVGQFTQANQLASVPVSTLTGIIQRVTFPLFSQLQDDPDKMANAYRQTLKLSALVIFPLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VALGLIAKPLFTSLLGEQWQGAAALLSVLCLGYMLYPIHSINLNLLQVTGRSDLFLKLEV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEHHH
MKKVIGVTVLLLSIPYGVLAMCLGFTLTSYLALLLNTYYTAKLTHLSQWQQCKDILPIWL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIFAAAVGYGAGLYFLQSWLQIAVNLSVALLMYGMYLVLAQKPLLLQLRSILRR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MIDLASKTKKGLQWSALERFLTQGIQLAITLYLARLLGPTAFGLVGMLAVFIAIANVFVD
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SGFTSALIRKTDRTESDLVTAFYYNIVMAGLCYFALYISAPLVADFYQQAELQTLLRILG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVLINAFTLIPRVKLNVVMDFKTQAKISVLSVLISGSAAIILATNGYGVWALVTQTLLN
HHHHHHHHHHHCCHHEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
ASCATFLFNLFAPWLPRGRITKHAFNYLFGYGSKLLLSGLLDVIYNNLYQIIIGKKFSPA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VVGQFTQANQLASVPVSTLTGIIQRVTFPLFSQLQDDPDKMANAYRQTLKLSALVIFPLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VALGLIAKPLFTSLLGEQWQGAAALLSVLCLGYMLYPIHSINLNLLQVTGRSDLFLKLEV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEHHH
MKKVIGVTVLLLSIPYGVLAMCLGFTLTSYLALLLNTYYTAKLTHLSQWQQCKDILPIWL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIFAAAVGYGAGLYFLQSWLQIAVNLSVALLMYGMYLVLAQKPLLLQLRSILRR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]