| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is wbbJ [C]
Identifier: 113969665
GI number: 113969665
Start: 1532345
End: 1532920
Strand: Direct
Name: wbbJ [C]
Synonym: Shewmr4_1322
Alternate gene names: 113969665
Gene position: 1532345-1532920 (Clockwise)
Preceding gene: 113969664
Following gene: 113969666
Centisome position: 32.56
GC content: 39.76
Gene sequence:
>576_bases ATGGCGTTTTTAACTGAAAAGCAATTAAATGAAATAGGGTTTGCATCTCTGGGCCATAATGTGCAGATCTCGGATAAAGC TTCCATTTATGGTGCCCACCGCATCAAGATTGGTAATAACGTCCGTATTGATGACTTTTGTGTTTTATCGGCAGGAGATG GTGGGATAGAAGTTGGTAACTATGTGCACATTGCTGTTTTTGCATTGCTCATAGGTGCTGGCAAAATAACGGTCTCTGAT TTCGCAGGGGTTTCGTCGAGAGTTGCAATTTATTCTAGTAACGATGACTATTCAGGCCTGTTTTTAACAAATCCTACTGT GCCTGTAGAATATACAAATGTAACACATGCCGATGTTTATTTAGGTAAACATGTCATTATTGGTTCTGGTTCTGTGGTAC TCCCCGGTGTTATTCTGCACGAAGGTGTTGCTGTGGGGGCATTATCGATGATTACCAAAGATTGTGAGGCATTTGGTGTT TATATCGGTTCACCTGCGAAAAAGATAAAAAGTCGTAAGCAAAATTTGTTGGATAAAGAAATTTTGTTAATGAGTGGTGA CGATAGGAAATGCTAA
Upstream 100 bases:
>100_bases AATGCATTGGCTGAAAAGGTATTGTGTTTGCCGATTTTCAATGAGCTAACTGTTGAACAGCAGCAACAGGTTATTGCATT AATTAAAGGGAGTTAGTCAG
Downstream 100 bases:
>100_bases AAATTGCTCATATAGCACCGGATGAAAAGTTTATAGAAACAGCCGTTGATATTTTTGAAACTGTTTATCCATGTCAGAAC ACCTTTTATATAACATCATC
Product: acetyltransferase
Products: NA
Alternate protein names: Transferase Hexapeptide Repeat Containing Protein; Hexapaptide Repeat-Containing Transferase; TDP-4-Oxo-6-Deoxy-D-Glucose Transaminase; Galactoside O-Acetyltransferase; O-Acetyltransferase; Acetyltransferase RfbO CysE/LacA/LpxA/NodL Family; LPS Biosynthesis O-Acetyl Transferase; CysE/LacA/LpxA/NodL Family O-Acyltransferase; DTDP-Glucose 4 6-Dehydratase; Pseudogene; Lipopolysaccharide Biosynthesis O-Acetyl Transferase; DTDP-Viosamine N-Acetyltransferase; Acetyltransferase CysE/LacA/LpxA/NodL Family
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAFLTEKQLNEIGFASLGHNVQISDKASIYGAHRIKIGNNVRIDDFCVLSAGDGGIEVGNYVHIAVFALLIGAGKITVSD FAGVSSRVAIYSSNDDYSGLFLTNPTVPVEYTNVTHADVYLGKHVIIGSGSVVLPGVILHEGVAVGALSMITKDCEAFGV YIGSPAKKIKSRKQNLLDKEILLMSGDDRKC
Sequences:
>Translated_191_residues MAFLTEKQLNEIGFASLGHNVQISDKASIYGAHRIKIGNNVRIDDFCVLSAGDGGIEVGNYVHIAVFALLIGAGKITVSD FAGVSSRVAIYSSNDDYSGLFLTNPTVPVEYTNVTHADVYLGKHVIIGSGSVVLPGVILHEGVAVGALSMITKDCEAFGV YIGSPAKKIKSRKQNLLDKEILLMSGDDRKC >Mature_190_residues AFLTEKQLNEIGFASLGHNVQISDKASIYGAHRIKIGNNVRIDDFCVLSAGDGGIEVGNYVHIAVFALLIGAGKITVSDF AGVSSRVAIYSSNDDYSGLFLTNPTVPVEYTNVTHADVYLGKHVIIGSGSVVLPGVILHEGVAVGALSMITKDCEAFGVY IGSPAKKIKSRKQNLLDKEILLMSGDDRKC
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 20316; Mature: 20184
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLTEKQLNEIGFASLGHNVQISDKASIYGAHRIKIGNNVRIDDFCVLSAGDGGIEVGN CCCCCHHHHHHCCHHHCCCCEEECCCCEEEEEEEEEECCCCEECCEEEEECCCCCEEECC YVHIAVFALLIGAGKITVSDFAGVSSRVAIYSSNDDYSGLFLTNPTVPVEYTNVTHADVY CHHHHHHHHHHCCCCEEEHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEE LGKHVIIGSGSVVLPGVILHEGVAVGALSMITKDCEAFGVYIGSPAKKIKSRKQNLLDKE ECCEEEEECCCEEECCHHHHCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCE ILLMSGDDRKC EEEEECCCCCC >Mature Secondary Structure AFLTEKQLNEIGFASLGHNVQISDKASIYGAHRIKIGNNVRIDDFCVLSAGDGGIEVGN CCCCHHHHHHCCHHHCCCCEEECCCCEEEEEEEEEECCCCEECCEEEEECCCCCEEECC YVHIAVFALLIGAGKITVSDFAGVSSRVAIYSSNDDYSGLFLTNPTVPVEYTNVTHADVY CHHHHHHHHHHCCCCEEEHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEE LGKHVIIGSGSVVLPGVILHEGVAVGALSMITKDCEAFGVYIGSPAKKIKSRKQNLLDKE ECCEEEEECCCEEECCHHHHCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCE ILLMSGDDRKC EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA