| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969617
Identifier: 113969617
GI number: 113969617
Start: 1481831
End: 1482223
Strand: Direct
Name: 113969617
Synonym: Shewmr4_1274
Alternate gene names: NA
Gene position: 1481831-1482223 (Clockwise)
Preceding gene: 113969616
Following gene: 113969618
Centisome position: 31.49
GC content: 42.49
Gene sequence:
>393_bases ATGGATGTTATTACAGCAAATGCACCTCATCCTATGTTGAGTAGAGATAGTCAGTTACGACCACCCTCTCAACTTAATGA TGAAGGCAATCCTAAAGTTCAACGTGACACAATTATCTCTCCCACGGATGCCGTTCAAGCGGCAGAGGATGTAAAAGCCT CTGAAAATAAGGAAATTGAGCTGCAGCAGGCAGTGGACGATATTGCAACTAGCATGGACTTTATTCAAAAGGGCTTGGCC TTTAAGATTGATAAAGAGCTGGGCGAACCTGTTGTGAGGGTGATTGATATCTCAACAGGAGATTTAATTCGGCAAATTCC TAATGAGGAAGCGCTCGAAATTGCTAAAAAGTTAAATGAGGTCACTGGACTGTTGATGAAAACAGAGGTGTAG
Upstream 100 bases:
>100_bases GGTATTAGATATCAATTAATCTATCAATGGTGTAATGCCTATATCAATCATGGATTATATTGGTCTAATTTTTGCCTTAG TTAATAAGCAGAGGTGAACC
Downstream 100 bases:
>100_bases GGTGGCTTGAGTTATGGATTTAAAATAAGTTGAGGTTTTTATGGGCTTAACATCGGTTGGTATTGGTTCTGGCATGGATA TCGGTGGCATAGTCACAGCG
Product: flagellar protein FlaG protein
Products: NA
Alternate protein names: Flagellin FlaG; Flagellar Protein FlaG
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDVITANAPHPMLSRDSQLRPPSQLNDEGNPKVQRDTIISPTDAVQAAEDVKASENKEIELQQAVDDIATSMDFIQKGLA FKIDKELGEPVVRVIDISTGDLIRQIPNEEALEIAKKLNEVTGLLMKTEV
Sequences:
>Translated_130_residues MDVITANAPHPMLSRDSQLRPPSQLNDEGNPKVQRDTIISPTDAVQAAEDVKASENKEIELQQAVDDIATSMDFIQKGLA FKIDKELGEPVVRVIDISTGDLIRQIPNEEALEIAKKLNEVTGLLMKTEV >Mature_130_residues MDVITANAPHPMLSRDSQLRPPSQLNDEGNPKVQRDTIISPTDAVQAAEDVKASENKEIELQQAVDDIATSMDFIQKGLA FKIDKELGEPVVRVIDISTGDLIRQIPNEEALEIAKKLNEVTGLLMKTEV
Specific function: Unknown
COG id: COG1334
COG function: function code N; Uncharacterized flagellar protein FlaG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14304; Mature: 14304
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVITANAPHPMLSRDSQLRPPSQLNDEGNPKVQRDTIISPTDAVQAAEDVKASENKEIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH LQQAVDDIATSMDFIQKGLAFKIDKELGEPVVRVIDISTGDLIRQIPNEEALEIAKKLNE HHHHHHHHHHHHHHHHHCCCEEECHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHH VTGLLMKTEV HHHHHHHCCC >Mature Secondary Structure MDVITANAPHPMLSRDSQLRPPSQLNDEGNPKVQRDTIISPTDAVQAAEDVKASENKEIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH LQQAVDDIATSMDFIQKGLAFKIDKELGEPVVRVIDISTGDLIRQIPNEEALEIAKKLNE HHHHHHHHHHHHHHHHHCCCEEECHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHH VTGLLMKTEV HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA