| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968809
Identifier: 113968809
GI number: 113968809
Start: 528333
End: 528758
Strand: Direct
Name: 113968809
Synonym: Shewmr4_0465
Alternate gene names: NA
Gene position: 528333-528758 (Clockwise)
Preceding gene: 113968808
Following gene: 113968810
Centisome position: 11.23
GC content: 48.36
Gene sequence:
>426_bases ATGAAGGGAGCGGGAGGAACACAGGGCGGTATTGGCCAATTTTTTATTGGGCTTGCCATGATGTGTGCAGGATTTTATCT GTTATTCAATGCGATACAGGTAAGTTCCAGTTTTGGGCTGGGCTATGGACTCTACCGCATGAATGCCTTTGGACAGGGAT TCTCTATCACCACAGGTATGGTGATGCTGCCGTTTATCCTCGGGATAGTGATGGTGTTTTTTGATGCCAAGACCAAGCTC GGTTGGCTGCTCACCTTAGGCTCCTTAGTCGCCTTAATTGTCGGCGTGATAAGCTCAATTCAGTTTCACTTTAGGGCCAT GTCGGCCTTCGATTTGATCGTGATTTTAGTGTTAGCCTTTGGTGGGCTAGGGCTGTTTTTGCGCTCGTTAAAAGCGGCGC CCACCGAGCAGAATGATCCCAAATAA
Upstream 100 bases:
>100_bases AGTTAGCAGCCCACGAGAAAGCCAAAAAGGCTGCAGAGGACCAACAGCTTAAAGAAGCTGTCGACAAAGCGATTCAACAA CGTCAATAGAAAGGATTGGT
Downstream 100 bases:
>100_bases CGGCTACACTGAAATCTAGTTCCCATACCCATAGCCTAGGAAATCCAATGCGTTGGCGTGACAGTGACCGCAGCTCCAAT ATCGAAGACAGACGTGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKAAPTEQNDPK
Sequences:
>Translated_141_residues MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKAAPTEQNDPK >Mature_141_residues MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKAAPTEQNDPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15019; Mature: 15019
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH VMLPFILGIVMVFFDAKTKLGWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGLFLRSLKAAPTEQNDPK HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH VMLPFILGIVMVFFDAKTKLGWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGLFLRSLKAAPTEQNDPK HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA